RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 SPINT4Q6UDR6 99 aa2.54□□□□□ -2
CDC42SE2-201ENST00000360515 KRTAP8-1Q8IUC2 63 aa2.53□□□□□ -2
CDC42SE2-201ENST00000360515 AHNAK2Q8IVF2 5795 aa2.53□□□□□ -2.01
CDC42SE2-201ENST00000360515 A0A1B0GVX0 72 aa2.53□□□□□ -2.01
CDC42SE2-201ENST00000360515 Q5W150 140 aa2.52□□□□□ -2.01
CDC42SE2-201ENST00000360515 KRTAP10-12P60413 245 aa2.52□□□□□ -2.01
CDC42SE2-201ENST00000360515 LUZP6Q538Z0 58 aa2.51□□□□□ -2.01
CDC42SE2-201ENST00000360515 KRTAP15-1Q3LI76 137 aa2.51□□□□□ -2.01
CDC42SE2-201ENST00000360515 H0YAA0 97 aa2.5□□□□□ -2.01
CDC42SE2-201ENST00000360515 PRO2289Q9P1D8 64 aa2.5□□□□□ -2.01
CDC42SE2-201ENST00000360515 KRTAP5-4Q6L8H1 288 aa2.49□□□□□ -2.01
CDC42SE2-201ENST00000360515 K7ERS5 55 aa2.48□□□□□ -2.01
CDC42SE2-201ENST00000360515 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
CDC42SE2-201ENST00000360515 IGKV2-30P06310 120 aa2.44□□□□□ -2.02
CDC42SE2-201ENST00000360515 A0A1B0GU33 70 aa2.43□□□□□ -2.02
CDC42SE2-201ENST00000360515 KRTAP3-1Q9BYR8 98 aa2.41□□□□□ -2.02
CDC42SE2-201ENST00000360515 IGKV2D-30A0A075B6S6 120 aa2.4□□□□□ -2.03
CDC42SE2-201ENST00000360515 C10orf95Q9H7T3 257 aa2.38□□□□□ -2.03
CDC42SE2-201ENST00000360515 S4R3F8 94 aa2.36□□□□□ -2.03
CDC42SE2-201ENST00000360515 KRTAP5-3Q6L8H2 238 aa2.36□□□□□ -2.03
CDC42SE2-201ENST00000360515 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
CDC42SE2-201ENST00000360515 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
CDC42SE2-201ENST00000360515 KRTAP19-3Q7Z4W3 81 aa2.33□□□□□ -2.04
CDC42SE2-201ENST00000360515 KRTAP10-7P60409 375 aaPredicted RBP2.31□□□□□ -2.04
CDC42SE2-201ENST00000360515 SPRR5A0A1B0GTR4 108 aa2.31□□□□□ -2.04
CDC42SE2-201ENST00000360515 KRTAP19-7Q3SYF9 63 aa2.3□□□□□ -2.04
CDC42SE2-201ENST00000360515 MT1EP04732 61 aa2.29□□□□□ -2.04
CDC42SE2-201ENST00000360515 A0A0D9SG42 100 aa2.26□□□□□ -2.05
CDC42SE2-201ENST00000360515 MT1GP13640 62 aa2.26□□□□□ -2.05
CDC42SE2-201ENST00000360515 CAMK2N1Q7Z7J9 78 aa2.26□□□□□ -2.05
CDC42SE2-201ENST00000360515 PLAC4Q8WY50 150 aa2.25□□□□□ -2.05
CDC42SE2-201ENST00000360515 KRTAP13-4Q3LI77 160 aa2.25□□□□□ -2.05
CDC42SE2-201ENST00000360515 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.05
CDC42SE2-201ENST00000360515 KRTAP5-5Q701N2 237 aaPredicted RBP2.21□□□□□ -2.06
CDC42SE2-201ENST00000360515 MT4P47944 62 aa2.19□□□□□ -2.06
CDC42SE2-201ENST00000360515 MT1MQ8N339 61 aa2.18□□□□□ -2.06
CDC42SE2-201ENST00000360515 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
CDC42SE2-201ENST00000360515 KRTAP23-1A1A580 65 aa2.18□□□□□ -2.06
CDC42SE2-201ENST00000360515 KRTAP12-1P59990 96 aa2.16□□□□□ -2.06
CDC42SE2-201ENST00000360515 PP632Q6XCG6 107 aa2.16□□□□□ -2.06
CDC42SE2-201ENST00000360515 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
CDC42SE2-201ENST00000360515 MT1LQ93083 61 aa2.11□□□□□ -2.07
CDC42SE2-201ENST00000360515 DSTQ03001 7570 aaKnown RBP2.1□□□□□ -2.07
CDC42SE2-201ENST00000360515 R4GN34 69 aa2.1□□□□□ -2.07
CDC42SE2-201ENST00000360515 KRTAP5-8O75690 187 aa2.09□□□□□ -2.08
CDC42SE2-201ENST00000360515 INE1O15225 51 aa2.05□□□□□ -2.08
CDC42SE2-201ENST00000360515 M0QZ58 72 aa2.05□□□□□ -2.08
CDC42SE2-201ENST00000360515 KRTAP19-5Q3LI72 72 aa2.02□□□□□ -2.09
CDC42SE2-201ENST00000360515 KRTAP12-4P60329 112 aa2.01□□□□□ -2.09
CDC42SE2-201ENST00000360515 KRTAP4-3Q9BYR4 195 aa1.95□□□□□ -2.1
CDC42SE2-201ENST00000360515 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.93□□□□□ -2.1
CDC42SE2-201ENST00000360515 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.11
CDC42SE2-201ENST00000360515 LCE3AQ5TA76 89 aa1.88□□□□□ -2.11
CDC42SE2-201ENST00000360515 TNP1P09430 55 aa1.84□□□□□ -2.11
CDC42SE2-201ENST00000360515 MT1AP04731 61 aa1.84□□□□□ -2.11
CDC42SE2-201ENST00000360515 LCE1EQ5T753 118 aa1.8□□□□□ -2.12
CDC42SE2-201ENST00000360515 SYNE1Q8NF91 8797 aaKnown RBP1.74□□□□□ -2.13
CDC42SE2-201ENST00000360515 KRTAP6-1Q3LI64 71 aa1.74□□□□□ -2.13
CDC42SE2-201ENST00000360515 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
CDC42SE2-201ENST00000360515 KRTAP12-3P60328 96 aa1.73□□□□□ -2.13
CDC42SE2-201ENST00000360515 KRTAP6-2Q3LI66 62 aa1.7□□□□□ -2.14
CDC42SE2-201ENST00000360515 MT3P25713 68 aa1.64□□□□□ -2.15
CDC42SE2-201ENST00000360515 LCE1FQ5T754 118 aa1.62□□□□□ -2.15
CDC42SE2-201ENST00000360515 LCE3CQ5T5A8 94 aa1.62□□□□□ -2.15
CDC42SE2-201ENST00000360515 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
CDC42SE2-201ENST00000360515 LCE1BQ5T7P3 118 aa1.62□□□□□ -2.15
CDC42SE2-201ENST00000360515 OBSCNQ5VST9 7968 aa1.54□□□□□ -2.16
CDC42SE2-201ENST00000360515 KRTAP9-6A8MVA2 160 aa1.53□□□□□ -2.16
CDC42SE2-201ENST00000360515 KRTAP4-4Q9BYR3 166 aa1.45□□□□□ -2.18
CDC42SE2-201ENST00000360515 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
CDC42SE2-201ENST00000360515 PRM1P04553 51 aa1.34□□□□□ -2.19
CDC42SE2-201ENST00000360515 LCE3EQ5T5B0 92 aa1.31□□□□□ -2.2
CDC42SE2-201ENST00000360515 KRTAP21-2Q3LI59 83 aa1.25□□□□□ -2.21
CDC42SE2-201ENST00000360515 LCE3DQ9BYE3 92 aa1.23□□□□□ -2.21
CDC42SE2-201ENST00000360515 KRTAP21-1Q3LI58 79 aa1.18□□□□□ -2.22
CDC42SE2-201ENST00000360515 MUC19Q7Z5P9 8384 aa1.15□□□□□ -2.23
CDC42SE2-201ENST00000360515 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 9.6 ms