RNA–Protein interactions for RNA: ENST00000358813.4

CCL20-201, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCL20, Length 800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-201ENST00000358813 KRTAP12-3P60328 96 aa2.15□□□□□ -2.07
CCL20-201ENST00000358813 MDN1Q9NU22 5596 aa2.14□□□□□ -2.07
CCL20-201ENST00000358813 KRTAP8-1Q8IUC2 63 aa2.14□□□□□ -2.07
CCL20-201ENST00000358813 MRPL34Q9BQ48 92 aaKnown RBP2.14□□□□□ -2.07
CCL20-201ENST00000358813 KLKP1Q107X0 134 aa2.13□□□□□ -2.07
CCL20-201ENST00000358813 ETDBQ3ZM63 59 aa2.13□□□□□ -2.07
CCL20-201ENST00000358813 SERP1Q9Y6X1 66 aa2.13□□□□□ -2.07
CCL20-201ENST00000358813 MT1BP07438 61 aa2.12□□□□□ -2.07
CCL20-201ENST00000358813 NREPQ16612 68 aa2.12□□□□□ -2.07
CCL20-201ENST00000358813 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
CCL20-201ENST00000358813 K7EQZ3 153 aa2.11□□□□□ -2.07
CCL20-201ENST00000358813 SPRR2GQ9BYE4 73 aa2.11□□□□□ -2.07
CCL20-201ENST00000358813 CRIPTQ9P021 101 aa2.11□□□□□ -2.07
CCL20-201ENST00000358813 ATP5EP56381 51 aaPredicted RBP2.1□□□□□ -2.07
CCL20-201ENST00000358813 KRTAP19-8Q3LI54 63 aa2.1□□□□□ -2.07
CCL20-201ENST00000358813 PLAC4Q8WY50 150 aa2.1□□□□□ -2.07
CCL20-201ENST00000358813 HCG22E2RYF7 251 aa2.08□□□□□ -2.08
CCL20-201ENST00000358813 ACYP1P07311 99 aa2.08□□□□□ -2.08
CCL20-201ENST00000358813 MMP24-AS1A0A0U1RRL7 71 aa2.07□□□□□ -2.08
CCL20-201ENST00000358813 ATOX1O00244 68 aa2.07□□□□□ -2.08
CCL20-201ENST00000358813 NDUFC1O43677 76 aa2.06□□□□□ -2.08
CCL20-201ENST00000358813 MT-ATP8P03928 68 aa2.06□□□□□ -2.08
CCL20-201ENST00000358813 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
CCL20-201ENST00000358813 UBL5Q9BZL1 73 aa2.04□□□□□ -2.08
CCL20-201ENST00000358813 LOC101927531A0A1B0GV80 90 aa2.03□□□□□ -2.08
CCL20-201ENST00000358813 LINC00643Q86TS7 51 aa2.03□□□□□ -2.08
CCL20-201ENST00000358813 SERP2Q8N6R1 65 aa2.02□□□□□ -2.09
CCL20-201ENST00000358813 C20orf197Q8N268 126 aa2.01□□□□□ -2.09
CCL20-201ENST00000358813 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
CCL20-201ENST00000358813 ATP5EP2Q5VTU8 51 aa1.99□□□□□ -2.09
CCL20-201ENST00000358813 SPTSSBQ8NFR3 76 aa1.99□□□□□ -2.09
CCL20-201ENST00000358813 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
CCL20-201ENST00000358813 TP53AIP1Q9HCN2 124 aa1.98□□□□□ -2.09
CCL20-201ENST00000358813 A0A087WVE0 104 aa1.97□□□□□ -2.09
CCL20-201ENST00000358813 M0QZ58 72 aa1.97□□□□□ -2.09
CCL20-201ENST00000358813 CYP4F30PQ9H0H9 118 aa1.97□□□□□ -2.09
CCL20-201ENST00000358813 LINC00208Q96KT6 92 aa1.96□□□□□ -2.1
CCL20-201ENST00000358813 H0YAA0 97 aa1.95□□□□□ -2.1
CCL20-201ENST00000358813 MT1XP80297 61 aa1.95□□□□□ -2.1
CCL20-201ENST00000358813 DSTQ03001 7570 aaKnown RBP1.95□□□□□ -2.1
CCL20-201ENST00000358813 TRAV22A0A0B4J277 110 aa1.93□□□□□ -2.1
CCL20-201ENST00000358813 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
CCL20-201ENST00000358813 H0Y9P7 68 aa1.89□□□□□ -2.11
CCL20-201ENST00000358813 MT4P47944 62 aa1.89□□□□□ -2.11
CCL20-201ENST00000358813 H7BZZ5 65 aa1.88□□□□□ -2.11
CCL20-201ENST00000358813 CHKB-CPT1BH3BT56 60 aa1.86□□□□□ -2.11
CCL20-201ENST00000358813 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.11
CCL20-201ENST00000358813 KRTAP19-3Q7Z4W3 81 aa1.83□□□□□ -2.12
CCL20-201ENST00000358813 AHNAK2Q8IVF2 5795 aa1.79□□□□□ -2.12
CCL20-201ENST00000358813 MT1GP13640 62 aa1.77□□□□□ -2.13
CCL20-201ENST00000358813 ACYP2P14621 99 aa1.77□□□□□ -2.13
CCL20-201ENST00000358813 UQCR11O14957 56 aa1.75□□□□□ -2.13
CCL20-201ENST00000358813 MT1EP04732 61 aa1.75□□□□□ -2.13
CCL20-201ENST00000358813 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
CCL20-201ENST00000358813 PRR15LQ9BU68 103 aa1.75□□□□□ -2.13
CCL20-201ENST00000358813 A0A0D9SG42 100 aa1.73□□□□□ -2.13
CCL20-201ENST00000358813 LINC01558Q9Y6Z2 57 aa1.73□□□□□ -2.13
CCL20-201ENST00000358813 KRTAP19-7Q3SYF9 63 aa1.72□□□□□ -2.13
CCL20-201ENST00000358813 KRTAP19-5Q3LI72 72 aa1.7□□□□□ -2.14
CCL20-201ENST00000358813 MT1MQ8N339 61 aa1.7□□□□□ -2.14
CCL20-201ENST00000358813 SPATA8Q6RVD6 105 aa1.68□□□□□ -2.14
CCL20-201ENST00000358813 A0A1B0GU69 56 aa1.67□□□□□ -2.14
CCL20-201ENST00000358813 KRTAP20-2Q3LI61 65 aa1.65□□□□□ -2.15
CCL20-201ENST00000358813 MT1LQ93083 61 aa1.65□□□□□ -2.15
CCL20-201ENST00000358813 TNP1P09430 55 aa1.63□□□□□ -2.15
CCL20-201ENST00000358813 C10orf95Q9H7T3 257 aa1.62□□□□□ -2.15
CCL20-201ENST00000358813 AHNAKQ09666 5890 aaKnown RBP1.61□□□□□ -2.15
CCL20-201ENST00000358813 MUC5ACP98088 5654 aa1.57□□□□□ -2.16
CCL20-201ENST00000358813 MUC5BQ9HC84 5762 aaPredicted RBP1.54□□□□□ -2.16
CCL20-201ENST00000358813 SYNE1Q8NF91 8797 aaKnown RBP1.47□□□□□ -2.17
CCL20-201ENST00000358813 MT1AP04731 61 aa1.42□□□□□ -2.18
CCL20-201ENST00000358813 KRTAP6-1Q3LI64 71 aa1.4□□□□□ -2.19
CCL20-201ENST00000358813 KRTAP6-2Q3LI66 62 aa1.4□□□□□ -2.19
CCL20-201ENST00000358813 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
CCL20-201ENST00000358813 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
CCL20-201ENST00000358813 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
CCL20-201ENST00000358813 PRM1P04553 51 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms