RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 U3KQA8 63 aa0.69□□□□□ -2.3
BRCA1-202ENST00000354071 PLXNA2O75051 1894 aa0.68□□□□□ -2.3
BRCA1-202ENST00000354071 LY6G6CO95867 125 aa0.68□□□□□ -2.3
BRCA1-202ENST00000354071 OBSCN-AS1Q96MR7 158 aa0.68□□□□□ -2.3
BRCA1-202ENST00000354071 CYSTM1Q9H1C7 97 aa0.68□□□□□ -2.3
BRCA1-202ENST00000354071 GVQW2A0A096LPI5 108 aaPredicted RBP0.68□□□□□ -2.3
BRCA1-202ENST00000354071 RPL37P61927 97 aaKnown RBP0.67□□□□□ -2.3
BRCA1-202ENST00000354071 CENPEQ02224 2701 aa0.67□□□□□ -2.3
BRCA1-202ENST00000354071 H3BNG1 76 aa0.66□□□□□ -2.3
BRCA1-202ENST00000354071 H1FX-AS1Q4G0G2 97 aa0.66□□□□□ -2.3
BRCA1-202ENST00000354071 Q5VSD8 79 aa0.66□□□□□ -2.3
BRCA1-202ENST00000354071 DSTQ03001 7570 aaKnown RBP0.66□□□□□ -2.3
BRCA1-202ENST00000354071 SPATA8Q6RVD6 105 aa0.66□□□□□ -2.3
BRCA1-202ENST00000354071 COX6B2Q6YFQ2 88 aa0.66□□□□□ -2.3
BRCA1-202ENST00000354071 SPRR4Q96PI1 79 aa0.66□□□□□ -2.3
BRCA1-202ENST00000354071 C9orf92A6NGG3 77 aa0.66□□□□□ -2.3
BRCA1-202ENST00000354071 PLAC4Q8WY50 150 aa0.66□□□□□ -2.3
BRCA1-202ENST00000354071 OBSCNQ5VST9 7968 aa0.65□□□□□ -2.31
BRCA1-202ENST00000354071 MMP24-AS1A0A0U1RRL7 71 aa0.65□□□□□ -2.31
BRCA1-202ENST00000354071 A0A096LNT2 108 aa0.64□□□□□ -2.31
BRCA1-202ENST00000354071 NBDYA0A0U1RRE5 68 aa0.64□□□□□ -2.31
BRCA1-202ENST00000354071 S4R3F8 94 aa0.64□□□□□ -2.31
BRCA1-202ENST00000354071 KLK9Q2XQG4 91 aa0.64□□□□□ -2.31
BRCA1-202ENST00000354071 LINC00472Q9H8W2 130 aa0.63□□□□□ -2.31
BRCA1-202ENST00000354071 C10orf142B7Z368 130 aa0.63□□□□□ -2.31
BRCA1-202ENST00000354071 Q6ZSA8 131 aa0.63□□□□□ -2.31
BRCA1-202ENST00000354071 M0QZ58 72 aa0.63□□□□□ -2.31
BRCA1-202ENST00000354071 SMR3BP02814 79 aaPredicted RBP0.62□□□□□ -2.31
BRCA1-202ENST00000354071 SPRR2DP22532 72 aa0.62□□□□□ -2.31
BRCA1-202ENST00000354071 K7EIL1 84 aa0.62□□□□□ -2.31
BRCA1-202ENST00000354071 C10orf95Q9H7T3 257 aa0.62□□□□□ -2.31
BRCA1-202ENST00000354071 A0A087WTM6 91 aa0.62□□□□□ -2.31
BRCA1-202ENST00000354071 SPRR1BP22528 89 aa0.62□□□□□ -2.31
BRCA1-202ENST00000354071 SPRR2EP22531 72 aa0.62□□□□□ -2.31
BRCA1-202ENST00000354071 SPRR1AP35321 89 aa0.62□□□□□ -2.31
BRCA1-202ENST00000354071 SPRR2BP35325 72 aa0.62□□□□□ -2.31
BRCA1-202ENST00000354071 SPRR2AP35326 72 aa0.62□□□□□ -2.31
BRCA1-202ENST00000354071 M0R2T5 61 aa0.61□□□□□ -2.31
BRCA1-202ENST00000354071 KRTAP10-4P60372 401 aaPredicted RBP0.6□□□□□ -2.31
BRCA1-202ENST00000354071 KRTAP19-6Q3LI70 58 aa0.6□□□□□ -2.31
BRCA1-202ENST00000354071 TNP1P09430 55 aa0.6□□□□□ -2.31
BRCA1-202ENST00000354071 INE1O15225 51 aa0.6□□□□□ -2.31
BRCA1-202ENST00000354071 KRTAP12-4P60329 112 aa0.59□□□□□ -2.31
BRCA1-202ENST00000354071 PLAC8Q9NZF1 115 aa0.59□□□□□ -2.32
BRCA1-202ENST00000354071 H0YAA0 97 aa0.57□□□□□ -2.32
BRCA1-202ENST00000354071 KRTAP21-2Q3LI59 83 aa0.57□□□□□ -2.32
BRCA1-202ENST00000354071 RPS29P62273 56 aaKnown RBP0.55□□□□□ -2.32
BRCA1-202ENST00000354071 MUC19Q7Z5P9 8384 aa0.52□□□□□ -2.33
BRCA1-202ENST00000354071 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
BRCA1-202ENST00000354071 KRTAP21-1Q3LI58 79 aa0.5□□□□□ -2.33
BRCA1-202ENST00000354071 MT4P47944 62 aa0.48□□□□□ -2.33
BRCA1-202ENST00000354071 SPRR2FQ96RM1 72 aa0.47□□□□□ -2.33
BRCA1-202ENST00000354071 MT1HL1P0DM35 61 aa0.44□□□□□ -2.34
BRCA1-202ENST00000354071 KRTAP4-1Q9BYQ7 146 aa0.43□□□□□ -2.34
BRCA1-202ENST00000354071 MT1HP80294 61 aa0.42□□□□□ -2.34
BRCA1-202ENST00000354071 KRTAP19-2Q3LHN2 52 aa0.4□□□□□ -2.35
BRCA1-202ENST00000354071 MUC16Q8WXI7 14507 aa0.4□□□□□ -2.35
BRCA1-202ENST00000354071 KRTAP8-1Q8IUC2 63 aa0.39□□□□□ -2.35
BRCA1-202ENST00000354071 KRTAP20-2Q3LI61 65 aa0.37□□□□□ -2.35
BRCA1-202ENST00000354071 KRTAP19-5Q3LI72 72 aa0.37□□□□□ -2.35
BRCA1-202ENST00000354071 KRTAP19-3Q7Z4W3 81 aa0.37□□□□□ -2.35
BRCA1-202ENST00000354071 SYNE1Q8NF91 8797 aaKnown RBP0.37□□□□□ -2.35
BRCA1-202ENST00000354071 SPRR2GQ9BYE4 73 aa0.36□□□□□ -2.35
BRCA1-202ENST00000354071 PRM1P04553 51 aa0.35□□□□□ -2.35
BRCA1-202ENST00000354071 MT1GP13640 62 aa0.34□□□□□ -2.35
BRCA1-202ENST00000354071 MT2AP02795 61 aa0.34□□□□□ -2.36
BRCA1-202ENST00000354071 MT1FP04733 61 aa0.32□□□□□ -2.36
BRCA1-202ENST00000354071 KRTAP19-8Q3LI54 63 aa0.32□□□□□ -2.36
BRCA1-202ENST00000354071 MT1LQ93083 61 aa0.32□□□□□ -2.36
BRCA1-202ENST00000354071 MT1XP80297 61 aa0.32□□□□□ -2.36
BRCA1-202ENST00000354071 MT1EP04732 61 aa0.3□□□□□ -2.36
BRCA1-202ENST00000354071 MT1BP07438 61 aa0.3□□□□□ -2.36
BRCA1-202ENST00000354071 KRTAP6-2Q3LI66 62 aa0.29□□□□□ -2.36
BRCA1-202ENST00000354071 MT1AP04731 61 aa0.28□□□□□ -2.36
BRCA1-202ENST00000354071 MT1MQ8N339 61 aa0.28□□□□□ -2.36
BRCA1-202ENST00000354071 KRTAP19-7Q3SYF9 63 aa0.25□□□□□ -2.37
BRCA1-202ENST00000354071 KRTAP6-1Q3LI64 71 aa0.25□□□□□ -2.37
Retrieved 77 of 20,778 RNA–protein pairs in 5.9 ms