RNA–Protein interactions for RNA: ENST00000338252.7

CAST-203, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-203ENST00000338252 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
CAST-203ENST00000338252 KRTAP10-10P60014 251 aa2.66□□□□□ -1.98
CAST-203ENST00000338252 KRTAP20-1Q3LI63 56 aa2.64□□□□□ -1.99
CAST-203ENST00000338252 SPRR2GQ9BYE4 73 aa2.64□□□□□ -1.99
CAST-203ENST00000338252 LCE5AQ5TCM9 118 aa2.63□□□□□ -1.99
CAST-203ENST00000338252 KRTAP12-3P60328 96 aa2.6□□□□□ -1.99
CAST-203ENST00000338252 MUC12Q9UKN1 5478 aa2.59□□□□□ -1.99
CAST-203ENST00000338252 KRTAP5-9P26371 169 aa2.58□□□□□ -2
CAST-203ENST00000338252 KRTAP10-5P60370 271 aa2.58□□□□□ -2
CAST-203ENST00000338252 KRTAP19-6Q3LI70 58 aa2.56□□□□□ -2
CAST-203ENST00000338252 KMT2DO14686 5537 aa2.55□□□□□ -2
CAST-203ENST00000338252 MT2AP02795 61 aa2.53□□□□□ -2
CAST-203ENST00000338252 KRTAP9-3Q9BYQ3 159 aa2.53□□□□□ -2
CAST-203ENST00000338252 MT1FP04733 61 aa2.51□□□□□ -2.01
CAST-203ENST00000338252 MT1XP80297 61 aa2.5□□□□□ -2.01
CAST-203ENST00000338252 KRTAP2-3P0C7H8 128 aa2.49□□□□□ -2.01
CAST-203ENST00000338252 KRTAP2-4Q9BYR9 128 aa2.49□□□□□ -2.01
CAST-203ENST00000338252 KRTAP2-1Q9BYU5 128 aa2.49□□□□□ -2.01
CAST-203ENST00000338252 LCE3CQ5T5A8 94 aa2.49□□□□□ -2.01
CAST-203ENST00000338252 MDN1Q9NU22 5596 aa2.48□□□□□ -2.01
CAST-203ENST00000338252 KRTAP19-8Q3LI54 63 aa2.46□□□□□ -2.01
CAST-203ENST00000338252 LCE4AQ5TA78 99 aa2.46□□□□□ -2.01
CAST-203ENST00000338252 GPR98Q8WXG9 6306 aa2.46□□□□□ -2.02
CAST-203ENST00000338252 KRTAP9-6A8MVA2 160 aa2.46□□□□□ -2.02
CAST-203ENST00000338252 KRTAP10-7P60409 375 aaPredicted RBP2.46□□□□□ -2.02
CAST-203ENST00000338252 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
CAST-203ENST00000338252 MT1BP07438 61 aa2.43□□□□□ -2.02
CAST-203ENST00000338252 KRTAP2-2Q9BYT5 123 aa2.4□□□□□ -2.03
CAST-203ENST00000338252 KRTAP19-5Q3LI72 72 aa2.4□□□□□ -2.03
CAST-203ENST00000338252 HMCN1Q96RW7 5635 aa2.37□□□□□ -2.03
CAST-203ENST00000338252 KRTAP5-4Q6L8H1 288 aa2.34□□□□□ -2.03
CAST-203ENST00000338252 SPRR2EP22531 72 aa2.32□□□□□ -2.04
CAST-203ENST00000338252 SPRR2BP35325 72 aa2.32□□□□□ -2.04
CAST-203ENST00000338252 SPRR2AP35326 72 aa2.32□□□□□ -2.04
CAST-203ENST00000338252 MT3P25713 68 aa2.28□□□□□ -2.04
CAST-203ENST00000338252 SPRR2FQ96RM1 72 aa2.28□□□□□ -2.05
CAST-203ENST00000338252 DSTQ03001 7570 aaKnown RBP2.27□□□□□ -2.05
CAST-203ENST00000338252 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
CAST-203ENST00000338252 SPRR2DP22532 72 aa2.25□□□□□ -2.05
CAST-203ENST00000338252 KRTAP12-4P60329 112 aa2.25□□□□□ -2.05
CAST-203ENST00000338252 LCE1AQ5T7P2 110 aa2.23□□□□□ -2.05
CAST-203ENST00000338252 KRTAP19-7Q3SYF9 63 aa2.22□□□□□ -2.05
CAST-203ENST00000338252 OBSCNQ5VST9 7968 aa2.19□□□□□ -2.06
CAST-203ENST00000338252 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
CAST-203ENST00000338252 MT1LQ93083 61 aa2.18□□□□□ -2.06
CAST-203ENST00000338252 MT1EP04732 61 aa2.12□□□□□ -2.07
CAST-203ENST00000338252 KRTAP4-4Q9BYR3 166 aa2.11□□□□□ -2.07
CAST-203ENST00000338252 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
CAST-203ENST00000338252 SYNE1Q8NF91 8797 aaKnown RBP2.1□□□□□ -2.07
CAST-203ENST00000338252 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
CAST-203ENST00000338252 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
CAST-203ENST00000338252 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
CAST-203ENST00000338252 MT1GP13640 62 aa2.05□□□□□ -2.08
CAST-203ENST00000338252 KRTAP4-3Q9BYR4 195 aa2.04□□□□□ -2.08
CAST-203ENST00000338252 LCE3DQ9BYE3 92 aa2.04□□□□□ -2.08
CAST-203ENST00000338252 PRM1P04553 51 aa2.03□□□□□ -2.08
CAST-203ENST00000338252 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
CAST-203ENST00000338252 KRTAP5-5Q701N2 237 aaPredicted RBP2.03□□□□□ -2.08
CAST-203ENST00000338252 MT1AP04731 61 aa2.01□□□□□ -2.09
CAST-203ENST00000338252 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
CAST-203ENST00000338252 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
CAST-203ENST00000338252 MT4P47944 62 aa2□□□□□ -2.09
CAST-203ENST00000338252 MT1MQ8N339 61 aa1.96□□□□□ -2.1
CAST-203ENST00000338252 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
CAST-203ENST00000338252 KRTAP19-3Q7Z4W3 81 aa1.9□□□□□ -2.1
CAST-203ENST00000338252 KRTAP6-2Q3LI66 62 aa1.87□□□□□ -2.11
CAST-203ENST00000338252 AHNAKQ09666 5890 aaKnown RBP1.87□□□□□ -2.11
CAST-203ENST00000338252 KRTAP6-1Q3LI64 71 aa1.86□□□□□ -2.11
CAST-203ENST00000338252 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
CAST-203ENST00000338252 KRTAP20-2Q3LI61 65 aa1.77□□□□□ -2.13
CAST-203ENST00000338252 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
CAST-203ENST00000338252 LCE1CQ5T751 118 aa1.43□□□□□ -2.18
CAST-203ENST00000338252 LCE1BQ5T7P3 118 aa1.43□□□□□ -2.18
CAST-203ENST00000338252 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
CAST-203ENST00000338252 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
CAST-203ENST00000338252 KRTAP21-2Q3LI59 83 aa1.2□□□□□ -2.22
CAST-203ENST00000338252 MUC16Q8WXI7 14507 aa0.68□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 129.4 ms