RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 PLAC4Q8WY50 150 aa4.71□□□□□ -1.66
C9orf85-201ENST00000334731 PRO2289Q9P1D8 64 aa4.71□□□□□ -1.66
C9orf85-201ENST00000334731 R4GN34 69 aa4.7□□□□□ -1.66
C9orf85-201ENST00000334731 KMT2DO14686 5537 aa4.7□□□□□ -1.66
C9orf85-201ENST00000334731 KRTAP20-1Q3LI63 56 aa4.69□□□□□ -1.66
C9orf85-201ENST00000334731 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
C9orf85-201ENST00000334731 M0QZ58 72 aa4.66□□□□□ -1.66
C9orf85-201ENST00000334731 MDN1Q9NU22 5596 aa4.62□□□□□ -1.67
C9orf85-201ENST00000334731 SPRR2FQ96RM1 72 aa4.62□□□□□ -1.67
C9orf85-201ENST00000334731 KRTAP12-2P59991 146 aa4.6□□□□□ -1.67
C9orf85-201ENST00000334731 KRTAP5-4Q6L8H1 288 aa4.6□□□□□ -1.67
C9orf85-201ENST00000334731 A0A0D9SG42 100 aa4.59□□□□□ -1.67
C9orf85-201ENST00000334731 KRTAP8-1Q8IUC2 63 aa4.59□□□□□ -1.67
C9orf85-201ENST00000334731 LCE1EQ5T753 118 aa4.57□□□□□ -1.68
C9orf85-201ENST00000334731 SPRR2EP22531 72 aa4.56□□□□□ -1.68
C9orf85-201ENST00000334731 SPRR2BP35325 72 aa4.56□□□□□ -1.68
C9orf85-201ENST00000334731 SPRR2AP35326 72 aa4.56□□□□□ -1.68
C9orf85-201ENST00000334731 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
C9orf85-201ENST00000334731 KRTAP4-4Q9BYR3 166 aa4.55□□□□□ -1.68
C9orf85-201ENST00000334731 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
C9orf85-201ENST00000334731 NDUFAF8A1L188 74 aa4.52□□□□□ -1.69
C9orf85-201ENST00000334731 KRTAP13-4Q3LI77 160 aa4.49□□□□□ -1.69
C9orf85-201ENST00000334731 KRTAP10-12P60413 245 aa4.48□□□□□ -1.69
C9orf85-201ENST00000334731 C10orf95Q9H7T3 257 aa4.45□□□□□ -1.7
C9orf85-201ENST00000334731 GPR98Q8WXG9 6306 aa4.43□□□□□ -1.7
C9orf85-201ENST00000334731 SPRR2DP22532 72 aa4.4□□□□□ -1.71
C9orf85-201ENST00000334731 KRTAP12-1P59990 96 aa4.4□□□□□ -1.71
C9orf85-201ENST00000334731 PP632Q6XCG6 107 aa4.4□□□□□ -1.71
C9orf85-201ENST00000334731 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.71
C9orf85-201ENST00000334731 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
C9orf85-201ENST00000334731 MT3P25713 68 aa4.35□□□□□ -1.71
C9orf85-201ENST00000334731 CAMK2N1Q7Z7J9 78 aa4.31□□□□□ -1.72
C9orf85-201ENST00000334731 KRTAP19-7Q3SYF9 63 aa4.22□□□□□ -1.73
C9orf85-201ENST00000334731 MT1EP04732 61 aa4.18□□□□□ -1.74
C9orf85-201ENST00000334731 KRTAP19-3Q7Z4W3 81 aa4.15□□□□□ -1.75
C9orf85-201ENST00000334731 TNP1P09430 55 aa4.12□□□□□ -1.75
C9orf85-201ENST00000334731 KRTAP19-5Q3LI72 72 aa4.1□□□□□ -1.75
C9orf85-201ENST00000334731 MT1GP13640 62 aa4.06□□□□□ -1.76
C9orf85-201ENST00000334731 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
C9orf85-201ENST00000334731 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
C9orf85-201ENST00000334731 MT1LQ93083 61 aa3.99□□□□□ -1.77
C9orf85-201ENST00000334731 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
C9orf85-201ENST00000334731 MT1MQ8N339 61 aa3.98□□□□□ -1.77
C9orf85-201ENST00000334731 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
C9orf85-201ENST00000334731 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
C9orf85-201ENST00000334731 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
C9orf85-201ENST00000334731 KRTAP5-2Q701N4 177 aa3.93□□□□□ -1.78
C9orf85-201ENST00000334731 KRTAP4-3Q9BYR4 195 aa3.93□□□□□ -1.78
C9orf85-201ENST00000334731 MT4P47944 62 aa3.86□□□□□ -1.79
C9orf85-201ENST00000334731 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
C9orf85-201ENST00000334731 INE1O15225 51 aa3.82□□□□□ -1.8
C9orf85-201ENST00000334731 HMCN1Q96RW7 5635 aa3.8□□□□□ -1.8
C9orf85-201ENST00000334731 AHNAK2Q8IVF2 5795 aa3.78□□□□□ -1.8
C9orf85-201ENST00000334731 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
C9orf85-201ENST00000334731 KRTAP5-10Q6L8G5 202 aa3.68□□□□□ -1.82
C9orf85-201ENST00000334731 KRTAP5-5Q701N2 237 aaPredicted RBP3.67□□□□□ -1.82
C9orf85-201ENST00000334731 KRTAP20-2Q3LI61 65 aa3.61□□□□□ -1.83
C9orf85-201ENST00000334731 KRTAP5-7Q6L8G8 165 aa3.6□□□□□ -1.83
C9orf85-201ENST00000334731 KRTAP12-4P60329 112 aa3.57□□□□□ -1.84
C9orf85-201ENST00000334731 SYNE1Q8NF91 8797 aaKnown RBP3.49□□□□□ -1.85
C9orf85-201ENST00000334731 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
C9orf85-201ENST00000334731 AHNAKQ09666 5890 aaKnown RBP3.38□□□□□ -1.87
C9orf85-201ENST00000334731 MT1AP04731 61 aa3.38□□□□□ -1.87
C9orf85-201ENST00000334731 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
C9orf85-201ENST00000334731 KRTAP5-8O75690 187 aa3.36□□□□□ -1.87
C9orf85-201ENST00000334731 KRTAP6-2Q3LI66 62 aa3.24□□□□□ -1.89
C9orf85-201ENST00000334731 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
C9orf85-201ENST00000334731 MUC5BQ9HC84 5762 aaPredicted RBP3.19□□□□□ -1.9
C9orf85-201ENST00000334731 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
C9orf85-201ENST00000334731 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
C9orf85-201ENST00000334731 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
C9orf85-201ENST00000334731 PRM1P04553 51 aa2.51□□□□□ -2.01
C9orf85-201ENST00000334731 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
C9orf85-201ENST00000334731 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
C9orf85-201ENST00000334731 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
C9orf85-201ENST00000334731 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
C9orf85-201ENST00000334731 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 116.5 ms