RNA–Protein interactions for RNA: ENST00000330149.9

TRAPPC6B-201, Transcript of trafficking protein particle complex 6B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,242 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-201ENST00000330149 KMT2DO14686 5537 aa2.68□□□□□ -1.98
TRAPPC6B-201ENST00000330149 LCE3CQ5T5A8 94 aa2.67□□□□□ -1.98
TRAPPC6B-201ENST00000330149 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
TRAPPC6B-201ENST00000330149 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
TRAPPC6B-201ENST00000330149 MDN1Q9NU22 5596 aa2.66□□□□□ -1.98
TRAPPC6B-201ENST00000330149 KRTAP19-6Q3LI70 58 aa2.64□□□□□ -1.99
TRAPPC6B-201ENST00000330149 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
TRAPPC6B-201ENST00000330149 KRTAP20-1Q3LI63 56 aa2.63□□□□□ -1.99
TRAPPC6B-201ENST00000330149 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
TRAPPC6B-201ENST00000330149 PP632Q6XCG6 107 aa2.59□□□□□ -1.99
TRAPPC6B-201ENST00000330149 LCE1EQ5T753 118 aa2.53□□□□□ -2
TRAPPC6B-201ENST00000330149 TNP1P09430 55 aa2.53□□□□□ -2.01
TRAPPC6B-201ENST00000330149 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
TRAPPC6B-201ENST00000330149 KRTAP2-3P0C7H8 128 aa2.46□□□□□ -2.02
TRAPPC6B-201ENST00000330149 KRTAP2-4Q9BYR9 128 aa2.46□□□□□ -2.02
TRAPPC6B-201ENST00000330149 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
TRAPPC6B-201ENST00000330149 KRTAP5-9P26371 169 aa2.45□□□□□ -2.02
TRAPPC6B-201ENST00000330149 DSTQ03001 7570 aaKnown RBP2.44□□□□□ -2.02
TRAPPC6B-201ENST00000330149 MT1BP07438 61 aa2.41□□□□□ -2.02
TRAPPC6B-201ENST00000330149 SPRR2EP22531 72 aa2.4□□□□□ -2.02
TRAPPC6B-201ENST00000330149 SPRR2BP35325 72 aa2.4□□□□□ -2.02
TRAPPC6B-201ENST00000330149 SPRR2AP35326 72 aa2.4□□□□□ -2.02
TRAPPC6B-201ENST00000330149 SPRR2FQ96RM1 72 aa2.4□□□□□ -2.03
TRAPPC6B-201ENST00000330149 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
TRAPPC6B-201ENST00000330149 KRTAP2-1Q9BYU5 128 aa2.38□□□□□ -2.03
TRAPPC6B-201ENST00000330149 KRTAP10-5P60370 271 aa2.37□□□□□ -2.03
TRAPPC6B-201ENST00000330149 OBSCNQ5VST9 7968 aa2.37□□□□□ -2.03
TRAPPC6B-201ENST00000330149 SPRR5A0A1B0GTR4 108 aa2.36□□□□□ -2.03
TRAPPC6B-201ENST00000330149 LCE1AQ5T7P2 110 aa2.35□□□□□ -2.03
TRAPPC6B-201ENST00000330149 LCE3AQ5TA76 89 aa2.33□□□□□ -2.04
TRAPPC6B-201ENST00000330149 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
TRAPPC6B-201ENST00000330149 SPRR2GQ9BYE4 73 aa2.32□□□□□ -2.04
TRAPPC6B-201ENST00000330149 INE1O15225 51 aa2.32□□□□□ -2.04
TRAPPC6B-201ENST00000330149 SPRR2DP22532 72 aa2.32□□□□□ -2.04
TRAPPC6B-201ENST00000330149 KRTAP19-8Q3LI54 63 aa2.3□□□□□ -2.04
TRAPPC6B-201ENST00000330149 SYNE1Q8NF91 8797 aaKnown RBP2.3□□□□□ -2.04
TRAPPC6B-201ENST00000330149 KRTAP8-1Q8IUC2 63 aa2.28□□□□□ -2.04
TRAPPC6B-201ENST00000330149 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
TRAPPC6B-201ENST00000330149 KRTAP12-3P60328 96 aa2.22□□□□□ -2.05
TRAPPC6B-201ENST00000330149 MT1XP80297 61 aa2.2□□□□□ -2.06
TRAPPC6B-201ENST00000330149 KRTAP10-12P60413 245 aa2.19□□□□□ -2.06
TRAPPC6B-201ENST00000330149 AHNAKQ09666 5890 aaKnown RBP2.14□□□□□ -2.07
TRAPPC6B-201ENST00000330149 KRTAP10-7P60409 375 aaPredicted RBP2.13□□□□□ -2.07
TRAPPC6B-201ENST00000330149 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
TRAPPC6B-201ENST00000330149 MT4P47944 62 aa2.11□□□□□ -2.07
TRAPPC6B-201ENST00000330149 MT3P25713 68 aa2.08□□□□□ -2.08
TRAPPC6B-201ENST00000330149 KRTAP5-7Q6L8G8 165 aa2.06□□□□□ -2.08
TRAPPC6B-201ENST00000330149 KRTAP19-5Q3LI72 72 aa2.06□□□□□ -2.08
TRAPPC6B-201ENST00000330149 KRTAP5-10Q6L8G5 202 aa2.06□□□□□ -2.08
TRAPPC6B-201ENST00000330149 KRTAP19-3Q7Z4W3 81 aa1.98□□□□□ -2.09
TRAPPC6B-201ENST00000330149 KRTAP19-7Q3SYF9 63 aa1.97□□□□□ -2.09
TRAPPC6B-201ENST00000330149 KRTAP9-6A8MVA2 160 aa1.97□□□□□ -2.09
TRAPPC6B-201ENST00000330149 MT1EP04732 61 aa1.95□□□□□ -2.1
TRAPPC6B-201ENST00000330149 KRTAP4-3Q9BYR4 195 aa1.94□□□□□ -2.1
TRAPPC6B-201ENST00000330149 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
TRAPPC6B-201ENST00000330149 KRTAP5-4Q6L8H1 288 aa1.9□□□□□ -2.11
TRAPPC6B-201ENST00000330149 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
TRAPPC6B-201ENST00000330149 MT1MQ8N339 61 aa1.88□□□□□ -2.11
TRAPPC6B-201ENST00000330149 MT1GP13640 62 aa1.88□□□□□ -2.11
TRAPPC6B-201ENST00000330149 KRTAP20-2Q3LI61 65 aa1.85□□□□□ -2.11
TRAPPC6B-201ENST00000330149 MT1LQ93083 61 aa1.85□□□□□ -2.11
TRAPPC6B-201ENST00000330149 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
TRAPPC6B-201ENST00000330149 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
TRAPPC6B-201ENST00000330149 KRTAP5-1Q6L8H4 278 aa1.77□□□□□ -2.13
TRAPPC6B-201ENST00000330149 KRTAP5-8O75690 187 aa1.74□□□□□ -2.13
TRAPPC6B-201ENST00000330149 KRTAP5-5Q701N2 237 aaPredicted RBP1.72□□□□□ -2.13
TRAPPC6B-201ENST00000330149 PRM1P04553 51 aa1.65□□□□□ -2.15
TRAPPC6B-201ENST00000330149 KRTAP5-2Q701N4 177 aa1.64□□□□□ -2.15
TRAPPC6B-201ENST00000330149 KRTAP6-1Q3LI64 71 aa1.59□□□□□ -2.16
TRAPPC6B-201ENST00000330149 MT1AP04731 61 aa1.59□□□□□ -2.16
TRAPPC6B-201ENST00000330149 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
TRAPPC6B-201ENST00000330149 LCE1CQ5T751 118 aa1.57□□□□□ -2.16
TRAPPC6B-201ENST00000330149 LCE1BQ5T7P3 118 aa1.57□□□□□ -2.16
TRAPPC6B-201ENST00000330149 PHGR1C9JFL3 82 aa1.24□□□□□ -2.21
TRAPPC6B-201ENST00000330149 KRTAP21-2Q3LI59 83 aa1.05□□□□□ -2.24
TRAPPC6B-201ENST00000330149 KRTAP21-1Q3LI58 79 aa0.97□□□□□ -2.25
TRAPPC6B-201ENST00000330149 MUC16Q8WXI7 14507 aa0.92□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 139.8 ms