RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 SPATA8Q6RVD6 105 aa5.7□□□□□ -1.5
RPP40-201ENST00000319533 SVIPQ8NHG7 77 aa5.7□□□□□ -1.5
RPP40-201ENST00000319533 KRTAP10-7P60409 375 aaPredicted RBP5.69□□□□□ -1.5
RPP40-201ENST00000319533 UQCR11O14957 56 aa5.63□□□□□ -1.51
RPP40-201ENST00000319533 A6NED7 52 aa5.61□□□□□ -1.51
RPP40-201ENST00000319533 A8MU10 97 aa5.61□□□□□ -1.51
RPP40-201ENST00000319533 A0A0D9SG42 100 aa5.58□□□□□ -1.52
RPP40-201ENST00000319533 MIR22HGQ0VDD5 57 aa5.58□□□□□ -1.52
RPP40-201ENST00000319533 KRTAP12-1P59990 96 aa5.51□□□□□ -1.53
RPP40-201ENST00000319533 CAMK2N1Q7Z7J9 78 aa5.51□□□□□ -1.53
RPP40-201ENST00000319533 CDC42SE1Q9NRR8 79 aa5.5□□□□□ -1.53
RPP40-201ENST00000319533 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
RPP40-201ENST00000319533 BRK1Q8WUW1 75 aa5.44□□□□□ -1.54
RPP40-201ENST00000319533 SPINT4Q6UDR6 99 aa5.43□□□□□ -1.54
RPP40-201ENST00000319533 KRTAP19-7Q3SYF9 63 aa5.37□□□□□ -1.55
RPP40-201ENST00000319533 A0A0A0MQY5 61 aa5.36□□□□□ -1.55
RPP40-201ENST00000319533 MT1EP04732 61 aa5.33□□□□□ -1.56
RPP40-201ENST00000319533 KRTAP19-3Q7Z4W3 81 aa5.33□□□□□ -1.56
RPP40-201ENST00000319533 K7ERS5 55 aa5.27□□□□□ -1.57
RPP40-201ENST00000319533 PRO0628Q9UI54 55 aa5.25□□□□□ -1.57
RPP40-201ENST00000319533 C10orf95Q9H7T3 257 aa5.23□□□□□ -1.57
RPP40-201ENST00000319533 HMCN1Q96RW7 5635 aa5.21□□□□□ -1.58
RPP40-201ENST00000319533 MT1GP13640 62 aa5.19□□□□□ -1.58
RPP40-201ENST00000319533 AHNAK2Q8IVF2 5795 aa5.12□□□□□ -1.59
RPP40-201ENST00000319533 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
RPP40-201ENST00000319533 ROMO1P60602 79 aa5.11□□□□□ -1.59
RPP40-201ENST00000319533 PP632Q6XCG6 107 aa5.11□□□□□ -1.59
RPP40-201ENST00000319533 TNP1P09430 55 aa5.1□□□□□ -1.59
RPP40-201ENST00000319533 MT4P47944 62 aa5.1□□□□□ -1.59
RPP40-201ENST00000319533 PMAIP1Q13794 54 aa5.1□□□□□ -1.59
RPP40-201ENST00000319533 MT1MQ8N339 61 aa5.08□□□□□ -1.6
RPP40-201ENST00000319533 KRTAP5-4Q6L8H1 288 aa5.06□□□□□ -1.6
RPP40-201ENST00000319533 MT1LQ93083 61 aa5.04□□□□□ -1.6
RPP40-201ENST00000319533 KRTAP5-10Q6L8G5 202 aa5.03□□□□□ -1.6
RPP40-201ENST00000319533 LCE3AQ5TA76 89 aa5□□□□□ -1.61
RPP40-201ENST00000319533 KRTAP25-1Q3LHN0 102 aa4.99□□□□□ -1.61
RPP40-201ENST00000319533 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
RPP40-201ENST00000319533 MT3P25713 68 aa4.93□□□□□ -1.62
RPP40-201ENST00000319533 KRTAP5-7Q6L8G8 165 aa4.9□□□□□ -1.63
RPP40-201ENST00000319533 PRAC1Q96KF2 57 aa4.9□□□□□ -1.63
RPP40-201ENST00000319533 KTN1-AS1Q86SY8 53 aa4.87□□□□□ -1.63
RPP40-201ENST00000319533 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
RPP40-201ENST00000319533 SPRR5A0A1B0GTR4 108 aa4.76□□□□□ -1.65
RPP40-201ENST00000319533 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
RPP40-201ENST00000319533 KRTAP5-5Q701N2 237 aaPredicted RBP4.73□□□□□ -1.65
RPP40-201ENST00000319533 KRTAP5-11Q6L8G4 156 aa4.7□□□□□ -1.66
RPP40-201ENST00000319533 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
RPP40-201ENST00000319533 KRTAP12-4P60329 112 aa4.63□□□□□ -1.67
RPP40-201ENST00000319533 LCE1FQ5T754 118 aa4.59□□□□□ -1.67
RPP40-201ENST00000319533 SYNE1Q8NF91 8797 aaKnown RBP4.56□□□□□ -1.68
RPP40-201ENST00000319533 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.54□□□□□ -1.68
RPP40-201ENST00000319533 AHNAKQ09666 5890 aaKnown RBP4.45□□□□□ -1.7
RPP40-201ENST00000319533 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
RPP40-201ENST00000319533 KRTAP5-2Q701N4 177 aa4.39□□□□□ -1.71
RPP40-201ENST00000319533 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
RPP40-201ENST00000319533 NDUFAF8A1L188 74 aa4.29□□□□□ -1.72
RPP40-201ENST00000319533 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
RPP40-201ENST00000319533 MT1AP04731 61 aa4.28□□□□□ -1.72
RPP40-201ENST00000319533 MUC5BQ9HC84 5762 aaPredicted RBP4.27□□□□□ -1.73
RPP40-201ENST00000319533 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
RPP40-201ENST00000319533 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
RPP40-201ENST00000319533 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
RPP40-201ENST00000319533 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
RPP40-201ENST00000319533 KRTAP5-1Q6L8H4 278 aa3.97□□□□□ -1.77
RPP40-201ENST00000319533 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
RPP40-201ENST00000319533 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
RPP40-201ENST00000319533 KRTAP4-4Q9BYR3 166 aa3.78□□□□□ -1.8
RPP40-201ENST00000319533 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
RPP40-201ENST00000319533 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
RPP40-201ENST00000319533 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
RPP40-201ENST00000319533 INE1O15225 51 aa3.13□□□□□ -1.91
RPP40-201ENST00000319533 PHGR1C9JFL3 82 aa2.98□□□□□ -1.93
RPP40-201ENST00000319533 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
RPP40-201ENST00000319533 PRM1P04553 51 aa2.69□□□□□ -1.98
RPP40-201ENST00000319533 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
RPP40-201ENST00000319533 KRTAP21-1Q3LI58 79 aa2.32□□□□□ -2.04
RPP40-201ENST00000319533 MUC16Q8WXI7 14507 aa1.82□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 289.4 ms