RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 KRTAP5-9P26371 169 aa2.58□□□□□ -2
ZNF440-201ENST00000304060 KRTAP12-2P59991 146 aa2.58□□□□□ -2
ZNF440-201ENST00000304060 KRTAP19-8Q3LI54 63 aa2.58□□□□□ -2
ZNF440-201ENST00000304060 SPRR2GQ9BYE4 73 aa2.57□□□□□ -2
ZNF440-201ENST00000304060 TNP1P09430 55 aa2.56□□□□□ -2
ZNF440-201ENST00000304060 PP632Q6XCG6 107 aa2.55□□□□□ -2
ZNF440-201ENST00000304060 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
ZNF440-201ENST00000304060 LCE1AQ5T7P2 110 aa2.52□□□□□ -2.01
ZNF440-201ENST00000304060 MT1BP07438 61 aa2.51□□□□□ -2.01
ZNF440-201ENST00000304060 LCE3BQ5TA77 95 aa2.5□□□□□ -2.01
ZNF440-201ENST00000304060 LOC100996750A0A140TA64 210 aa2.48□□□□□ -2.01
ZNF440-201ENST00000304060 KRTAP4-6Q9BYQ5 205 aa2.48□□□□□ -2.01
ZNF440-201ENST00000304060 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
ZNF440-201ENST00000304060 KRTAP19-4Q3LI73 84 aa2.41□□□□□ -2.02
ZNF440-201ENST00000304060 KMT2DO14686 5537 aa2.39□□□□□ -2.03
ZNF440-201ENST00000304060 MDN1Q9NU22 5596 aa2.34□□□□□ -2.03
ZNF440-201ENST00000304060 LCE3CQ5T5A8 94 aa2.34□□□□□ -2.03
ZNF440-201ENST00000304060 KRTAP10-12P60413 245 aa2.31□□□□□ -2.04
ZNF440-201ENST00000304060 MT1XP80297 61 aa2.31□□□□□ -2.04
ZNF440-201ENST00000304060 KRTAP10-7P60409 375 aaPredicted RBP2.28□□□□□ -2.04
ZNF440-201ENST00000304060 KRTAP4-9Q9BYQ8 210 aa2.25□□□□□ -2.05
ZNF440-201ENST00000304060 MUC12Q9UKN1 5478 aa2.25□□□□□ -2.05
ZNF440-201ENST00000304060 MT4P47944 62 aa2.23□□□□□ -2.05
ZNF440-201ENST00000304060 KRTAP4-8A0A0G2JLE6 195 aa2.22□□□□□ -2.05
ZNF440-201ENST00000304060 KRTAP4-8Q9BYQ9 185 aa2.22□□□□□ -2.05
ZNF440-201ENST00000304060 MT1GP13640 62 aa2.22□□□□□ -2.05
ZNF440-201ENST00000304060 KRTAP19-3Q7Z4W3 81 aa2.22□□□□□ -2.05
ZNF440-201ENST00000304060 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
ZNF440-201ENST00000304060 LCE1DQ5T752 114 aa2.19□□□□□ -2.06
ZNF440-201ENST00000304060 KRTAP12-4P60329 112 aa2.17□□□□□ -2.06
ZNF440-201ENST00000304060 LCE1EQ5T753 118 aa2.15□□□□□ -2.06
ZNF440-201ENST00000304060 KRTAP12-3P60328 96 aa2.14□□□□□ -2.07
ZNF440-201ENST00000304060 MT1EP04732 61 aa2.12□□□□□ -2.07
ZNF440-201ENST00000304060 KRTAP5-7Q6L8G8 165 aa2.11□□□□□ -2.07
ZNF440-201ENST00000304060 KRTAP4-12Q9BQ66 201 aa2.08□□□□□ -2.08
ZNF440-201ENST00000304060 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
ZNF440-201ENST00000304060 KRTAP5-3Q6L8H2 238 aa2.07□□□□□ -2.08
ZNF440-201ENST00000304060 LCE3AQ5TA76 89 aa2.07□□□□□ -2.08
ZNF440-201ENST00000304060 DSTQ03001 7570 aaKnown RBP2.06□□□□□ -2.08
ZNF440-201ENST00000304060 MT1MQ8N339 61 aa2.05□□□□□ -2.08
ZNF440-201ENST00000304060 KRTAP19-5Q3LI72 72 aa2.05□□□□□ -2.08
ZNF440-201ENST00000304060 KRTAP5-4Q6L8H1 288 aa2.03□□□□□ -2.08
ZNF440-201ENST00000304060 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
ZNF440-201ENST00000304060 KRTAP19-7Q3SYF9 63 aa2.02□□□□□ -2.09
ZNF440-201ENST00000304060 AHNAK2Q8IVF2 5795 aa2.02□□□□□ -2.09
ZNF440-201ENST00000304060 LCE3DQ9BYE3 92 aa2□□□□□ -2.09
ZNF440-201ENST00000304060 MT1LQ93083 61 aa1.99□□□□□ -2.09
ZNF440-201ENST00000304060 KRTAP4-7Q9BYR0 210 aa1.99□□□□□ -2.09
ZNF440-201ENST00000304060 MT3P25713 68 aa1.99□□□□□ -2.09
ZNF440-201ENST00000304060 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
ZNF440-201ENST00000304060 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
ZNF440-201ENST00000304060 KRTAP4-2Q9BYR5 136 aa1.95□□□□□ -2.1
ZNF440-201ENST00000304060 KRTAP4-11Q9BYQ6 195 aa1.88□□□□□ -2.11
ZNF440-201ENST00000304060 KRTAP4-3Q9BYR4 195 aa1.85□□□□□ -2.11
ZNF440-201ENST00000304060 OBSCNQ5VST9 7968 aa1.83□□□□□ -2.12
ZNF440-201ENST00000304060 SYNE1Q8NF91 8797 aaKnown RBP1.81□□□□□ -2.12
ZNF440-201ENST00000304060 KRTAP9-6A8MVA2 160 aa1.8□□□□□ -2.12
ZNF440-201ENST00000304060 MUC5BQ9HC84 5762 aaPredicted RBP1.78□□□□□ -2.12
ZNF440-201ENST00000304060 MT1AP04731 61 aa1.78□□□□□ -2.12
ZNF440-201ENST00000304060 KRTAP5-8O75690 187 aa1.75□□□□□ -2.13
ZNF440-201ENST00000304060 KRTAP5-5Q701N2 237 aaPredicted RBP1.73□□□□□ -2.13
ZNF440-201ENST00000304060 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
ZNF440-201ENST00000304060 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
ZNF440-201ENST00000304060 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
ZNF440-201ENST00000304060 KRTAP6-2Q3LI66 62 aa1.66□□□□□ -2.14
ZNF440-201ENST00000304060 KRTAP6-1Q3LI64 71 aa1.64□□□□□ -2.15
ZNF440-201ENST00000304060 LCE1BQ5T7P3 118 aa1.57□□□□□ -2.16
ZNF440-201ENST00000304060 PRM1P04553 51 aa1.52□□□□□ -2.17
ZNF440-201ENST00000304060 KRTAP5-1Q6L8H4 278 aa1.5□□□□□ -2.17
ZNF440-201ENST00000304060 LCE1CQ5T751 118 aa1.39□□□□□ -2.19
ZNF440-201ENST00000304060 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
ZNF440-201ENST00000304060 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.37□□□□□ -2.19
ZNF440-201ENST00000304060 KRTAP5-11Q6L8G4 156 aa1.28□□□□□ -2.2
ZNF440-201ENST00000304060 KRTAP4-4Q9BYR3 166 aa1.24□□□□□ -2.21
ZNF440-201ENST00000304060 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
ZNF440-201ENST00000304060 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
ZNF440-201ENST00000304060 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 112.5 ms