RNA–Protein interactions for RNA: ENST00000282074.6

SPC25-201, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC25, Length 1,354 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-201ENST00000282074 LCE1AQ5T7P2 110 aa5.17□□□□□ -1.58
SPC25-201ENST00000282074 KRTAP5-11Q6L8G4 156 aa5.17□□□□□ -1.58
SPC25-201ENST00000282074 KRTAP25-1Q3LHN0 102 aa5.16□□□□□ -1.58
SPC25-201ENST00000282074 SPRR2DP22532 72 aa5.16□□□□□ -1.58
SPC25-201ENST00000282074 M0QZ58 72 aa5.15□□□□□ -1.59
SPC25-201ENST00000282074 KRTAP8-1Q8IUC2 63 aa5.15□□□□□ -1.59
SPC25-201ENST00000282074 CRIPTQ9P021 101 aa5.15□□□□□ -1.59
SPC25-201ENST00000282074 ROMO1P60602 79 aa5.14□□□□□ -1.59
SPC25-201ENST00000282074 KRTAP10-7P60409 375 aaPredicted RBP5.13□□□□□ -1.59
SPC25-201ENST00000282074 PRO2289Q9P1D8 64 aa5.12□□□□□ -1.59
SPC25-201ENST00000282074 KRTAP13-4Q3LI77 160 aa5.04□□□□□ -1.6
SPC25-201ENST00000282074 P0C880 135 aa5.03□□□□□ -1.6
SPC25-201ENST00000282074 MT1XP80297 61 aa5□□□□□ -1.61
SPC25-201ENST00000282074 KRTAP12-2P59991 146 aa4.99□□□□□ -1.61
SPC25-201ENST00000282074 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
SPC25-201ENST00000282074 KRTAP12-1P59990 96 aa4.96□□□□□ -1.62
SPC25-201ENST00000282074 PLAC4Q8WY50 150 aa4.96□□□□□ -1.62
SPC25-201ENST00000282074 A0A0D9SG42 100 aa4.95□□□□□ -1.62
SPC25-201ENST00000282074 DSTQ03001 7570 aaKnown RBP4.95□□□□□ -1.62
SPC25-201ENST00000282074 R4GN34 69 aa4.88□□□□□ -1.63
SPC25-201ENST00000282074 SPINT4Q6UDR6 99 aa4.84□□□□□ -1.63
SPC25-201ENST00000282074 KRTAP10-12P60413 245 aa4.76□□□□□ -1.65
SPC25-201ENST00000282074 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
SPC25-201ENST00000282074 LCE1EQ5T753 118 aa4.71□□□□□ -1.66
SPC25-201ENST00000282074 HMCN1Q96RW7 5635 aa4.69□□□□□ -1.66
SPC25-201ENST00000282074 C10orf95Q9H7T3 257 aa4.67□□□□□ -1.66
SPC25-201ENST00000282074 KRTAP5-1Q6L8H4 278 aa4.66□□□□□ -1.66
SPC25-201ENST00000282074 AHNAK2Q8IVF2 5795 aa4.61□□□□□ -1.67
SPC25-201ENST00000282074 CAMK2N1Q7Z7J9 78 aa4.6□□□□□ -1.67
SPC25-201ENST00000282074 KRTAP5-4Q6L8H1 288 aa4.56□□□□□ -1.68
SPC25-201ENST00000282074 MT4P47944 62 aa4.53□□□□□ -1.68
SPC25-201ENST00000282074 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
SPC25-201ENST00000282074 TNP1P09430 55 aa4.53□□□□□ -1.69
SPC25-201ENST00000282074 KRTAP5-10Q6L8G5 202 aa4.53□□□□□ -1.69
SPC25-201ENST00000282074 KRTAP4-4Q9BYR3 166 aa4.52□□□□□ -1.69
SPC25-201ENST00000282074 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
SPC25-201ENST00000282074 MT1EP04732 61 aa4.46□□□□□ -1.7
SPC25-201ENST00000282074 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
SPC25-201ENST00000282074 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
SPC25-201ENST00000282074 MT1GP13640 62 aa4.4□□□□□ -1.71
SPC25-201ENST00000282074 LUZP6Q538Z0 58 aa4.37□□□□□ -1.71
SPC25-201ENST00000282074 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
SPC25-201ENST00000282074 MT1MQ8N339 61 aa4.28□□□□□ -1.72
SPC25-201ENST00000282074 KRTAP19-5Q3LI72 72 aa4.27□□□□□ -1.73
SPC25-201ENST00000282074 MT1LQ93083 61 aa4.2□□□□□ -1.74
SPC25-201ENST00000282074 KRTAP4-3Q9BYR4 195 aa4.18□□□□□ -1.74
SPC25-201ENST00000282074 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
SPC25-201ENST00000282074 KRTAP20-2Q3LI61 65 aa4.13□□□□□ -1.75
SPC25-201ENST00000282074 LCE3AQ5TA76 89 aa4.13□□□□□ -1.75
SPC25-201ENST00000282074 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
SPC25-201ENST00000282074 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
SPC25-201ENST00000282074 OBSCNQ5VST9 7968 aa4.02□□□□□ -1.77
SPC25-201ENST00000282074 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
SPC25-201ENST00000282074 AHNAKQ09666 5890 aaKnown RBP3.99□□□□□ -1.77
SPC25-201ENST00000282074 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
SPC25-201ENST00000282074 MUC5ACP98088 5654 aa3.91□□□□□ -1.78
SPC25-201ENST00000282074 MUC5BQ9HC84 5762 aaPredicted RBP3.88□□□□□ -1.79
SPC25-201ENST00000282074 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
SPC25-201ENST00000282074 INE1O15225 51 aa3.87□□□□□ -1.79
SPC25-201ENST00000282074 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
SPC25-201ENST00000282074 MT3P25713 68 aa3.83□□□□□ -1.8
SPC25-201ENST00000282074 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
SPC25-201ENST00000282074 KRTAP5-8O75690 187 aa3.76□□□□□ -1.81
SPC25-201ENST00000282074 MT1AP04731 61 aa3.57□□□□□ -1.84
SPC25-201ENST00000282074 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
SPC25-201ENST00000282074 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
SPC25-201ENST00000282074 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
SPC25-201ENST00000282074 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
SPC25-201ENST00000282074 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
SPC25-201ENST00000282074 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
SPC25-201ENST00000282074 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
SPC25-201ENST00000282074 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
SPC25-201ENST00000282074 PRM1P04553 51 aa2.63□□□□□ -1.99
SPC25-201ENST00000282074 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
SPC25-201ENST00000282074 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
SPC25-201ENST00000282074 KRTAP21-1Q3LI58 79 aa2.06□□□□□ -2.08
SPC25-201ENST00000282074 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 123.2 ms