RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 CHTF8P0CG12 524 aa3.4□□□□□ -1.87
CASC19-260ENST00000641828 MT3P25713 68 aa3.4□□□□□ -1.87
CASC19-260ENST00000641828 NUPR2A6NF83 97 aa3.38□□□□□ -1.87
CASC19-260ENST00000641828 A8MUU9 505 aa3.37□□□□□ -1.87
CASC19-260ENST00000641828 KRTAP1-5Q9BYS1 174 aa3.36□□□□□ -1.87
CASC19-260ENST00000641828 SPINK6Q6UWN8 80 aa3.34□□□□□ -1.87
CASC19-260ENST00000641828 LINC00304Q8N9R0 145 aa3.34□□□□□ -1.88
CASC19-260ENST00000641828 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
CASC19-260ENST00000641828 DYNC1H1Q14204 4646 aaKnown RBP3.32□□□□□ -1.88
CASC19-260ENST00000641828 KMT2AQ03164 3969 aa3.32□□□□□ -1.88
CASC19-260ENST00000641828 HSPG2P98160 4391 aa3.31□□□□□ -1.88
CASC19-260ENST00000641828 H0YAA0 97 aa3.3□□□□□ -1.88
CASC19-260ENST00000641828 P0C880 135 aa3.3□□□□□ -1.88
CASC19-260ENST00000641828 Q6ZSA8 131 aa3.3□□□□□ -1.88
CASC19-260ENST00000641828 DNAH11Q96DT5 4516 aa3.3□□□□□ -1.88
CASC19-260ENST00000641828 PANO1I0J062 215 aa3.29□□□□□ -1.88
CASC19-260ENST00000641828 PKHD1P08F94 4074 aa3.29□□□□□ -1.88
CASC19-260ENST00000641828 SSBP3-AS1Q7Z2R9 100 aa3.28□□□□□ -1.88
CASC19-260ENST00000641828 K7ERS5 55 aa3.27□□□□□ -1.89
CASC19-260ENST00000641828 SPACA4Q8TDM5 124 aa3.27□□□□□ -1.89
CASC19-260ENST00000641828 ANAPC11Q9NYG5 84 aa3.27□□□□□ -1.89
CASC19-260ENST00000641828 A0A1B0GU33 70 aa3.27□□□□□ -1.89
CASC19-260ENST00000641828 CIRBP-AS1Q8TBR5 109 aa3.27□□□□□ -1.89
CASC19-260ENST00000641828 SPINK1P00995 79 aa3.26□□□□□ -1.89
CASC19-260ENST00000641828 PSORS1C2Q9UIG4 136 aa3.26□□□□□ -1.89
CASC19-260ENST00000641828 DNAH6Q9C0G6 4158 aa3.26□□□□□ -1.89
CASC19-260ENST00000641828 FLG2Q5D862 2391 aaPredicted RBP3.25□□□□□ -1.89
CASC19-260ENST00000641828 Q5VSD8 79 aa3.25□□□□□ -1.89
CASC19-260ENST00000641828 UBE2DNLQ8IWF7 75 aa3.24□□□□□ -1.89
CASC19-260ENST00000641828 DNAH8Q96JB1 4490 aa3.24□□□□□ -1.89
CASC19-260ENST00000641828 DNAH17Q9UFH2 4485 aa3.24□□□□□ -1.89
CASC19-260ENST00000641828 H1FX-AS1Q4G0G2 97 aa3.24□□□□□ -1.89
CASC19-260ENST00000641828 CAMK2N1Q7Z7J9 78 aa3.23□□□□□ -1.89
CASC19-260ENST00000641828 VPS13DQ5THJ4 4388 aa3.23□□□□□ -1.89
CASC19-260ENST00000641828 FAT2Q9NYQ8 4349 aa3.23□□□□□ -1.89
CASC19-260ENST00000641828 DNAH2Q9P225 4427 aa3.23□□□□□ -1.89
CASC19-260ENST00000641828 PKD1P98161 4303 aa3.22□□□□□ -1.89
CASC19-260ENST00000641828 APLNQ9ULZ1 77 aa3.22□□□□□ -1.89
CASC19-260ENST00000641828 SPINT4Q6UDR6 99 aa3.21□□□□□ -1.9
CASC19-260ENST00000641828 CRIPTQ9P021 101 aa3.2□□□□□ -1.9
CASC19-260ENST00000641828 Q6ZRN7 208 aaPredicted RBP3.2□□□□□ -1.9
CASC19-260ENST00000641828 KRTAP2-2Q9BYT5 123 aa3.2□□□□□ -1.9
CASC19-260ENST00000641828 A0A087WTM6 91 aa3.19□□□□□ -1.9
CASC19-260ENST00000641828 NBDYA0A0U1RRE5 68 aa3.19□□□□□ -1.9
CASC19-260ENST00000641828 C20orf166-AS1Q96NR2 134 aa3.19□□□□□ -1.9
CASC19-260ENST00000641828 HMCN2Q8NDA2 5059 aa3.19□□□□□ -1.9
CASC19-260ENST00000641828 MYCBP2O75592 4640 aa3.18□□□□□ -1.9
CASC19-260ENST00000641828 APOBP04114 4563 aaKnown RBP3.18□□□□□ -1.9
CASC19-260ENST00000641828 RNF213Q63HN8 5207 aa3.17□□□□□ -1.9
CASC19-260ENST00000641828 SMR3BP02814 79 aaPredicted RBP3.16□□□□□ -1.9
CASC19-260ENST00000641828 COX6B2Q6YFQ2 88 aa3.15□□□□□ -1.91
CASC19-260ENST00000641828 RPL37P61927 97 aaKnown RBP3.14□□□□□ -1.91
CASC19-260ENST00000641828 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
CASC19-260ENST00000641828 TPRXLQ17RH7 258 aa3.14□□□□□ -1.91
CASC19-260ENST00000641828 LRP1BQ9NZR2 4599 aa3.13□□□□□ -1.91
CASC19-260ENST00000641828 KRTAP13-2Q52LG2 175 aa3.12□□□□□ -1.91
CASC19-260ENST00000641828 VPS13BQ7Z7G8 4022 aa3.12□□□□□ -1.91
CASC19-260ENST00000641828 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
CASC19-260ENST00000641828 CRCT1Q9UGL9 99 aa3.09□□□□□ -1.91
CASC19-260ENST00000641828 DNAH5Q8TE73 4624 aa3.08□□□□□ -1.92
CASC19-260ENST00000641828 FAT1Q14517 4588 aa3.05□□□□□ -1.92
CASC19-260ENST00000641828 FAT4Q6V0I7 4981 aa3.05□□□□□ -1.92
CASC19-260ENST00000641828 C10orf95Q9H7T3 257 aa3.05□□□□□ -1.92
CASC19-260ENST00000641828 KRTAP1-4P0C5Y4 121 aa3.04□□□□□ -1.92
CASC19-260ENST00000641828 KRTAP10-1P60331 282 aa3.04□□□□□ -1.92
CASC19-260ENST00000641828 RPS29P62273 56 aaKnown RBP3.04□□□□□ -1.92
CASC19-260ENST00000641828 MUC2Q02817 5179 aa3.04□□□□□ -1.92
CASC19-260ENST00000641828 KRTAP10-6P60371 365 aaPredicted RBP3.03□□□□□ -1.92
CASC19-260ENST00000641828 PKHD1L1Q86WI1 4243 aa3.03□□□□□ -1.92
CASC19-260ENST00000641828 A0A0D9SG42 100 aa3.02□□□□□ -1.93
CASC19-260ENST00000641828 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
CASC19-260ENST00000641828 KRTAP13-4Q3LI77 160 aa3.01□□□□□ -1.93
CASC19-260ENST00000641828 S4R3F8 94 aa3□□□□□ -1.93
CASC19-260ENST00000641828 LRP2P98164 4655 aa2.99□□□□□ -1.93
CASC19-260ENST00000641828 C9orf92A6NGG3 77 aa2.97□□□□□ -1.93
CASC19-260ENST00000641828 KRTAP12-2P59991 146 aa2.96□□□□□ -1.94
CASC19-260ENST00000641828 KRTAP10-12P60413 245 aa2.96□□□□□ -1.94
CASC19-260ENST00000641828 FSIP2Q5CZC0 6907 aa2.96□□□□□ -1.94
CASC19-260ENST00000641828 LRP1Q07954 4544 aaKnown RBP2.95□□□□□ -1.94
CASC19-260ENST00000641828 MT1HL1P0DM35 61 aa2.95□□□□□ -1.94
CASC19-260ENST00000641828 FAT3Q8TDW7 4589 aa2.93□□□□□ -1.94
CASC19-260ENST00000641828 KRTAP12-1P59990 96 aa2.93□□□□□ -1.94
CASC19-260ENST00000641828 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
CASC19-260ENST00000641828 KRTAP10-4P60372 401 aaPredicted RBP2.91□□□□□ -1.94
CASC19-260ENST00000641828 PLAC4Q8WY50 150 aa2.91□□□□□ -1.94
CASC19-260ENST00000641828 TNXBP22105 4242 aa2.9□□□□□ -1.95
CASC19-260ENST00000641828 M0QZ58 72 aa2.89□□□□□ -1.95
CASC19-260ENST00000641828 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
CASC19-260ENST00000641828 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
CASC19-260ENST00000641828 KRTAP10-8P60410 259 aa2.8□□□□□ -1.96
CASC19-260ENST00000641828 PP632Q6XCG6 107 aa2.79□□□□□ -1.96
CASC19-260ENST00000641828 LPAP08519 4548 aa2.79□□□□□ -1.96
CASC19-260ENST00000641828 KRTAP10-5P60370 271 aa2.73□□□□□ -1.97
CASC19-260ENST00000641828 R4GN34 69 aa2.73□□□□□ -1.97
CASC19-260ENST00000641828 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
CASC19-260ENST00000641828 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
CASC19-260ENST00000641828 PRO2289Q9P1D8 64 aa2.68□□□□□ -1.98
CASC19-260ENST00000641828 SPRR5A0A1B0GTR4 108 aa2.67□□□□□ -1.98
CASC19-260ENST00000641828 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
CASC19-260ENST00000641828 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms