RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 CHTF8P0CG12 524 aa3.4□□□□□ -1.87
CASC19-260ENST00000641828 MT3P25713 68 aa3.4□□□□□ -1.87
CASC19-260ENST00000641828 NUPR2A6NF83 97 aa3.38□□□□□ -1.87
CASC19-260ENST00000641828 A8MUU9 505 aa3.37□□□□□ -1.87
CASC19-260ENST00000641828 KRTAP1-5Q9BYS1 174 aa3.36□□□□□ -1.87
CASC19-260ENST00000641828 SPINK6Q6UWN8 80 aa3.34□□□□□ -1.87
CASC19-260ENST00000641828 LINC00304Q8N9R0 145 aa3.34□□□□□ -1.88
CASC19-260ENST00000641828 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.32□□□□□ -1.88
CASC19-260ENST00000641828 DYNC1H1Q14204 4646 aaKnown RBP3.32□□□□□ -1.88
CASC19-260ENST00000641828 KMT2AQ03164 3969 aa3.32□□□□□ -1.88
CASC19-260ENST00000641828 HSPG2P98160 4391 aa3.31□□□□□ -1.88
CASC19-260ENST00000641828 H0YAA0 97 aa3.3□□□□□ -1.88
CASC19-260ENST00000641828 P0C880 135 aa3.3□□□□□ -1.88
CASC19-260ENST00000641828 Q6ZSA8 131 aa3.3□□□□□ -1.88
CASC19-260ENST00000641828 DNAH11Q96DT5 4516 aa3.3□□□□□ -1.88
CASC19-260ENST00000641828 PANO1I0J062 215 aa3.29□□□□□ -1.88
CASC19-260ENST00000641828 PKHD1P08F94 4074 aa3.29□□□□□ -1.88
CASC19-260ENST00000641828 SSBP3-AS1Q7Z2R9 100 aa3.28□□□□□ -1.88
CASC19-260ENST00000641828 K7ERS5 55 aa3.27□□□□□ -1.89
CASC19-260ENST00000641828 SPACA4Q8TDM5 124 aa3.27□□□□□ -1.89
CASC19-260ENST00000641828 ANAPC11Q9NYG5 84 aa3.27□□□□□ -1.89
CASC19-260ENST00000641828 A0A1B0GU33 70 aa3.27□□□□□ -1.89
CASC19-260ENST00000641828 CIRBP-AS1Q8TBR5 109 aa3.27□□□□□ -1.89
CASC19-260ENST00000641828 SPINK1P00995 79 aa3.26□□□□□ -1.89
CASC19-260ENST00000641828 PSORS1C2Q9UIG4 136 aa3.26□□□□□ -1.89
CASC19-260ENST00000641828 DNAH6Q9C0G6 4158 aa3.26□□□□□ -1.89
CASC19-260ENST00000641828 FLG2Q5D862 2391 aaPredicted RBP3.25□□□□□ -1.89
CASC19-260ENST00000641828 Q5VSD8 79 aa3.25□□□□□ -1.89
CASC19-260ENST00000641828 UBE2DNLQ8IWF7 75 aa3.24□□□□□ -1.89
CASC19-260ENST00000641828 DNAH8Q96JB1 4490 aa3.24□□□□□ -1.89
CASC19-260ENST00000641828 DNAH17Q9UFH2 4485 aa3.24□□□□□ -1.89
CASC19-260ENST00000641828 H1FX-AS1Q4G0G2 97 aa3.24□□□□□ -1.89
CASC19-260ENST00000641828 CAMK2N1Q7Z7J9 78 aa3.23□□□□□ -1.89
CASC19-260ENST00000641828 VPS13DQ5THJ4 4388 aa3.23□□□□□ -1.89
CASC19-260ENST00000641828 FAT2Q9NYQ8 4349 aa3.23□□□□□ -1.89
CASC19-260ENST00000641828 DNAH2Q9P225 4427 aa3.23□□□□□ -1.89
CASC19-260ENST00000641828 PKD1P98161 4303 aa3.22□□□□□ -1.89
CASC19-260ENST00000641828 APLNQ9ULZ1 77 aa3.22□□□□□ -1.89
CASC19-260ENST00000641828 SPINT4Q6UDR6 99 aa3.21□□□□□ -1.9
CASC19-260ENST00000641828 CRIPTQ9P021 101 aa3.2□□□□□ -1.9
CASC19-260ENST00000641828 Q6ZRN7 208 aaPredicted RBP3.2□□□□□ -1.9
CASC19-260ENST00000641828 KRTAP2-2Q9BYT5 123 aa3.2□□□□□ -1.9
CASC19-260ENST00000641828 A0A087WTM6 91 aa3.19□□□□□ -1.9
CASC19-260ENST00000641828 NBDYA0A0U1RRE5 68 aa3.19□□□□□ -1.9
CASC19-260ENST00000641828 C20orf166-AS1Q96NR2 134 aa3.19□□□□□ -1.9
CASC19-260ENST00000641828 HMCN2Q8NDA2 5059 aa3.19□□□□□ -1.9
CASC19-260ENST00000641828 MYCBP2O75592 4640 aa3.18□□□□□ -1.9
CASC19-260ENST00000641828 APOBP04114 4563 aaKnown RBP3.18□□□□□ -1.9
CASC19-260ENST00000641828 RNF213Q63HN8 5207 aa3.17□□□□□ -1.9
CASC19-260ENST00000641828 SMR3BP02814 79 aaPredicted RBP3.16□□□□□ -1.9
CASC19-260ENST00000641828 COX6B2Q6YFQ2 88 aa3.15□□□□□ -1.91
CASC19-260ENST00000641828 RPL37P61927 97 aaKnown RBP3.14□□□□□ -1.91
CASC19-260ENST00000641828 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
CASC19-260ENST00000641828 TPRXLQ17RH7 258 aa3.14□□□□□ -1.91
CASC19-260ENST00000641828 LRP1BQ9NZR2 4599 aa3.13□□□□□ -1.91
CASC19-260ENST00000641828 KRTAP13-2Q52LG2 175 aa3.12□□□□□ -1.91
CASC19-260ENST00000641828 VPS13BQ7Z7G8 4022 aa3.12□□□□□ -1.91
CASC19-260ENST00000641828 KRTAP5-9P26371 169 aa3.1□□□□□ -1.91
CASC19-260ENST00000641828 CRCT1Q9UGL9 99 aa3.09□□□□□ -1.91
CASC19-260ENST00000641828 DNAH5Q8TE73 4624 aa3.08□□□□□ -1.92
CASC19-260ENST00000641828 FAT1Q14517 4588 aa3.05□□□□□ -1.92
CASC19-260ENST00000641828 FAT4Q6V0I7 4981 aa3.05□□□□□ -1.92
CASC19-260ENST00000641828 C10orf95Q9H7T3 257 aa3.05□□□□□ -1.92
CASC19-260ENST00000641828 KRTAP1-4P0C5Y4 121 aa3.04□□□□□ -1.92
CASC19-260ENST00000641828 KRTAP10-1P60331 282 aa3.04□□□□□ -1.92
CASC19-260ENST00000641828 RPS29P62273 56 aaKnown RBP3.04□□□□□ -1.92
CASC19-260ENST00000641828 MUC2Q02817 5179 aa3.04□□□□□ -1.92
CASC19-260ENST00000641828 KRTAP10-6P60371 365 aaPredicted RBP3.03□□□□□ -1.92
CASC19-260ENST00000641828 PKHD1L1Q86WI1 4243 aa3.03□□□□□ -1.92
CASC19-260ENST00000641828 A0A0D9SG42 100 aa3.02□□□□□ -1.93
CASC19-260ENST00000641828 LUZP6Q538Z0 58 aa3.02□□□□□ -1.93
CASC19-260ENST00000641828 KRTAP13-4Q3LI77 160 aa3.01□□□□□ -1.93
CASC19-260ENST00000641828 S4R3F8 94 aa3□□□□□ -1.93
CASC19-260ENST00000641828 LRP2P98164 4655 aa2.99□□□□□ -1.93
CASC19-260ENST00000641828 C9orf92A6NGG3 77 aa2.97□□□□□ -1.93
CASC19-260ENST00000641828 KRTAP12-2P59991 146 aa2.96□□□□□ -1.94
CASC19-260ENST00000641828 KRTAP10-12P60413 245 aa2.96□□□□□ -1.94
CASC19-260ENST00000641828 FSIP2Q5CZC0 6907 aa2.96□□□□□ -1.94
CASC19-260ENST00000641828 LRP1Q07954 4544 aaKnown RBP2.95□□□□□ -1.94
CASC19-260ENST00000641828 MT1HL1P0DM35 61 aa2.95□□□□□ -1.94
CASC19-260ENST00000641828 FAT3Q8TDW7 4589 aa2.93□□□□□ -1.94
CASC19-260ENST00000641828 KRTAP12-1P59990 96 aa2.93□□□□□ -1.94
CASC19-260ENST00000641828 LCE3CQ5T5A8 94 aa2.92□□□□□ -1.94
CASC19-260ENST00000641828 KRTAP10-4P60372 401 aaPredicted RBP2.91□□□□□ -1.94
CASC19-260ENST00000641828 PLAC4Q8WY50 150 aa2.91□□□□□ -1.94
CASC19-260ENST00000641828 TNXBP22105 4242 aa2.9□□□□□ -1.95
CASC19-260ENST00000641828 M0QZ58 72 aa2.89□□□□□ -1.95
CASC19-260ENST00000641828 KRTAP5-4Q6L8H1 288 aa2.86□□□□□ -1.95
CASC19-260ENST00000641828 HMCN1Q96RW7 5635 aa2.81□□□□□ -1.96
CASC19-260ENST00000641828 KRTAP10-8P60410 259 aa2.8□□□□□ -1.96
CASC19-260ENST00000641828 PP632Q6XCG6 107 aa2.79□□□□□ -1.96
CASC19-260ENST00000641828 LPAP08519 4548 aa2.79□□□□□ -1.96
CASC19-260ENST00000641828 KRTAP10-5P60370 271 aa2.73□□□□□ -1.97
CASC19-260ENST00000641828 R4GN34 69 aa2.73□□□□□ -1.97
CASC19-260ENST00000641828 KRTAP4-4Q9BYR3 166 aa2.71□□□□□ -1.98
CASC19-260ENST00000641828 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
CASC19-260ENST00000641828 PRO2289Q9P1D8 64 aa2.68□□□□□ -1.98
CASC19-260ENST00000641828 SPRR5A0A1B0GTR4 108 aa2.67□□□□□ -1.98
CASC19-260ENST00000641828 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
CASC19-260ENST00000641828 KRTAP5-11Q6L8G4 156 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms