RNA–Protein interactions for RNA: ENST00000641558.1

MFSD8-238, Transcript of major facilitator superfamily domain containing 8, human

Gene MFSD8, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MFSD8-238	ENST00000641558	NIPBL	Q6KC79	2804 aa	eCLIP	0.31	□□□□□ -2.36
MFSD8-238	ENST00000641558	LRBA	P50851	2863 aa		0.31	□□□□□ -2.36
MFSD8-238	ENST00000641558	CFAP54	Q96N23	3096 aa		0.3	□□□□□ -2.36
MFSD8-238	ENST00000641558	FREM2	Q5SZK8	3169 aa		0.3	□□□□□ -2.36
MFSD8-238	ENST00000641558	ATP7A	Q04656	1500 aa		0.3	□□□□□ -2.36
MFSD8-238	ENST00000641558	IGLV5-48	A0A075B6I7	105 aa		0.3	□□□□□ -2.36
MFSD8-238	ENST00000641558	TFF3	Q07654	80 aa		0.3	□□□□□ -2.36
MFSD8-238	ENST00000641558	CRYBG3	Q68DQ2	2970 aa		0.3	□□□□□ -2.36
MFSD8-238	ENST00000641558	TRPM2	O94759	1503 aa		0.29	□□□□□ -2.36
MFSD8-238	ENST00000641558	NFAT5	O94916	1531 aa		0.29	□□□□□ -2.36
MFSD8-238	ENST00000641558	C9orf92	A6NGG3	77 aa		0.29	□□□□□ -2.36
MFSD8-238	ENST00000641558	CENPF	P49454	3210 aa		0.29	□□□□□ -2.36
MFSD8-238	ENST00000641558	TOP2A	P11388	1531 aa	Known RBP	0.28	□□□□□ -2.36
MFSD8-238	ENST00000641558	DCHS2	Q6V1P9	2916 aa		0.28	□□□□□ -2.36
MFSD8-238	ENST00000641558	SAMD9L	Q8IVG5	1584 aa		0.28	□□□□□ -2.36
MFSD8-238	ENST00000641558	ASPM	Q8IZT6	3477 aa		0.28	□□□□□ -2.36
MFSD8-238	ENST00000641558	USH2A	O75445	5202 aa		0.28	□□□□□ -2.36
MFSD8-238	ENST00000641558	SPRR2B	P35325	72 aa		0.28	□□□□□ -2.36
MFSD8-238	ENST00000641558	KAAG1	Q9UBP8	84 aa		0.28	□□□□□ -2.36
MFSD8-238	ENST00000641558	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.28	□□□□□ -2.36
MFSD8-238	ENST00000641558	LRP1	Q07954	4544 aa	Known RBP	0.28	□□□□□ -2.36
MFSD8-238	ENST00000641558	PRKDC	P78527	4128 aa	Known RBP	0.28	□□□□□ -2.36
MFSD8-238	ENST00000641558	BRCA2	P51587	3418 aa		0.28	□□□□□ -2.37
MFSD8-238	ENST00000641558	HTT	P42858	3142 aa		0.27	□□□□□ -2.37
MFSD8-238	ENST00000641558	SYNE1	Q8NF91	8797 aa	Known RBP	0.27	□□□□□ -2.37
MFSD8-238	ENST00000641558	DEFB131A	P59861	70 aa		0.27	□□□□□ -2.37
MFSD8-238	ENST00000641558	WFDC10B	Q8IUB3	73 aa		0.27	□□□□□ -2.37
MFSD8-238	ENST00000641558	MGA	Q8IWI9	3026 aa		0.27	□□□□□ -2.37
MFSD8-238	ENST00000641558	CLTCL1	P53675	1640 aa		0.27	□□□□□ -2.37
MFSD8-238	ENST00000641558	SRRM2	Q9UQ35	2752 aa	Known RBP	0.27	□□□□□ -2.37
MFSD8-238	ENST00000641558	DMXL2	Q8TDJ6	3036 aa		0.27	□□□□□ -2.37
MFSD8-238	ENST00000641558	MYCBP2	O75592	4640 aa		0.26	□□□□□ -2.37
MFSD8-238	ENST00000641558	CENPE	Q02224	2701 aa		0.26	□□□□□ -2.37
MFSD8-238	ENST00000641558	NF1	P21359	2839 aa		0.26	□□□□□ -2.37
MFSD8-238	ENST00000641558	NDUFA1	O15239	70 aa		0.26	□□□□□ -2.37
MFSD8-238	ENST00000641558	USP34	Q70CQ2	3546 aa		0.26	□□□□□ -2.37
MFSD8-238	ENST00000641558	NBPF19	A0A087WUL8	3843 aa		0.26	□□□□□ -2.37
MFSD8-238	ENST00000641558	FAT3	Q8TDW7	4589 aa		0.26	□□□□□ -2.37
MFSD8-238	ENST00000641558		A8MTW9	85 aa		0.25	□□□□□ -2.37
MFSD8-238	ENST00000641558	MUC12	Q9UKN1	5478 aa		0.25	□□□□□ -2.37
MFSD8-238	ENST00000641558	LOC400499	M0QZD8	3231 aa		0.25	□□□□□ -2.37
MFSD8-238	ENST00000641558	VPS13A	Q96RL7	3174 aa		0.25	□□□□□ -2.37
MFSD8-238	ENST00000641558	SVEP1	Q4LDE5	3571 aa		0.25	□□□□□ -2.37
MFSD8-238	ENST00000641558	MMP24-AS1	A0A0U1RRL7	71 aa		0.24	□□□□□ -2.37
MFSD8-238	ENST00000641558	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.24	□□□□□ -2.37
MFSD8-238	ENST00000641558	TACC2	O95359	2948 aa		0.23	□□□□□ -2.37
MFSD8-238	ENST00000641558	SPTBN5	Q9NRC6	3674 aa	Known RBP	0.23	□□□□□ -2.37
MFSD8-238	ENST00000641558	LPA	P08519	4548 aa		0.23	□□□□□ -2.37
MFSD8-238	ENST00000641558	WDFY3	Q8IZQ1	3526 aa		0.22	□□□□□ -2.37
MFSD8-238	ENST00000641558	PRUNE2	Q8WUY3	3088 aa		0.22	□□□□□ -2.37
MFSD8-238	ENST00000641558	CSMD2	Q7Z408	3487 aa		0.22	□□□□□ -2.37
MFSD8-238	ENST00000641558	MUC3A	Q02505	3323 aa		0.22	□□□□□ -2.37
MFSD8-238	ENST00000641558	CUBN	O60494	3623 aa		0.22	□□□□□ -2.37
MFSD8-238	ENST00000641558		H3BNG1	76 aa		0.22	□□□□□ -2.37
MFSD8-238	ENST00000641558		M0QY20	66 aa		0.22	□□□□□ -2.37
MFSD8-238	ENST00000641558		M0QZ58	72 aa		0.22	□□□□□ -2.37
MFSD8-238	ENST00000641558	LYST	Q99698	3801 aa		0.22	□□□□□ -2.37
MFSD8-238	ENST00000641558	TRIO	O75962	3097 aa		0.22	□□□□□ -2.37
MFSD8-238	ENST00000641558	LAMA1	P25391	3075 aa		0.22	□□□□□ -2.37
MFSD8-238	ENST00000641558	ADGRG4	Q8IZF6	3080 aa		0.21	□□□□□ -2.38
MFSD8-238	ENST00000641558	SPRR2A	P35326	72 aa		0.21	□□□□□ -2.38
MFSD8-238	ENST00000641558	FRY	Q5TBA9	3013 aa		0.21	□□□□□ -2.38
MFSD8-238	ENST00000641558	KMT2A	Q03164	3969 aa		0.21	□□□□□ -2.38
MFSD8-238	ENST00000641558	DMXL1	Q9Y485	3027 aa		0.2	□□□□□ -2.38
MFSD8-238	ENST00000641558	KRTAP19-6	Q3LI70	58 aa		0.2	□□□□□ -2.38
MFSD8-238	ENST00000641558	GOLGB1	Q14789	3259 aa	Known RBP	0.19	□□□□□ -2.38
MFSD8-238	ENST00000641558	ATM	Q13315	3056 aa		0.19	□□□□□ -2.38
MFSD8-238	ENST00000641558	TNP1	P09430	55 aa		0.19	□□□□□ -2.38
MFSD8-238	ENST00000641558	DNAH14	Q0VDD8	3507 aa		0.18	□□□□□ -2.38
MFSD8-238	ENST00000641558	LAMA5	O15230	3695 aa		0.18	□□□□□ -2.38
MFSD8-238	ENST00000641558	MT1A	P04731	61 aa		0.18	□□□□□ -2.38
MFSD8-238	ENST00000641558	UTRN	P46939	3433 aa		0.18	□□□□□ -2.38
MFSD8-238	ENST00000641558	XIRP2	A4UGR9	3374 aa		0.18	□□□□□ -2.38
MFSD8-238	ENST00000641558	MT4	P47944	62 aa		0.17	□□□□□ -2.38
MFSD8-238	ENST00000641558	KRTAP6-2	Q3LI66	62 aa		0.17	□□□□□ -2.38
MFSD8-238	ENST00000641558	MYO15A	Q9UKN7	3530 aa		0.17	□□□□□ -2.38
MFSD8-238	ENST00000641558	CHD7	Q9P2D1	2997 aa		0.17	□□□□□ -2.38
MFSD8-238	ENST00000641558	CDH23	Q9H251	3354 aa		0.16	□□□□□ -2.38
MFSD8-238	ENST00000641558	LRP1B	Q9NZR2	4599 aa		0.16	□□□□□ -2.38
MFSD8-238	ENST00000641558	SPEN	Q96T58	3664 aa	Known RBP	0.15	□□□□□ -2.38
MFSD8-238	ENST00000641558	VPS13B	Q7Z7G8	4022 aa		0.15	□□□□□ -2.39
MFSD8-238	ENST00000641558	SPRR2E	P22531	72 aa		0.15	□□□□□ -2.39
MFSD8-238	ENST00000641558	SNRPG	P62308	76 aa	Known RBP	0.15	□□□□□ -2.39
MFSD8-238	ENST00000641558	DEFB110	Q30KQ9	67 aa		0.15	□□□□□ -2.39
MFSD8-238	ENST00000641558	CLPSL2	Q6UWE3	100 aa		0.15	□□□□□ -2.39
MFSD8-238	ENST00000641558	HSPG2	P98160	4391 aa		0.15	□□□□□ -2.39
MFSD8-238	ENST00000641558	VPS13C	Q709C8	3753 aa		0.15	□□□□□ -2.39
MFSD8-238	ENST00000641558	DUOX1	Q9NRD9	1551 aa		0.15	□□□□□ -2.39
MFSD8-238	ENST00000641558	LRP2	P98164	4655 aa		0.14	□□□□□ -2.39
MFSD8-238	ENST00000641558	SMG1	Q96Q15	3661 aa	Known RBP	0.14	□□□□□ -2.39
MFSD8-238	ENST00000641558	ZZEF1	O43149	2961 aa		0.14	□□□□□ -2.39
MFSD8-238	ENST00000641558	SACS	Q9NZJ4	4579 aa		0.14	□□□□□ -2.39
MFSD8-238	ENST00000641558	MROH2B	Q7Z745	1585 aa		0.14	□□□□□ -2.39
MFSD8-238	ENST00000641558	HECTD4	Q9Y4D8	3996 aa		0.13	□□□□□ -2.39
MFSD8-238	ENST00000641558	DNAH7	Q8WXX0	4024 aa		0.13	□□□□□ -2.39
MFSD8-238	ENST00000641558	POLR2K	P53803	58 aa	Known RBP	0.13	□□□□□ -2.39
MFSD8-238	ENST00000641558	DYNC1H1	Q14204	4646 aa	Known RBP	0.13	□□□□□ -2.39
MFSD8-238	ENST00000641558	PKHD1	P08F94	4074 aa		0.12	□□□□□ -2.39
MFSD8-238	ENST00000641558	PKD1	P98161	4303 aa		0.12	□□□□□ -2.39
MFSD8-238	ENST00000641558	STARD9	Q9P2P6	4700 aa		0.11	□□□□□ -2.39

Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms