RNA–Protein interactions for RNA: ENST00000640655.1

AC116366.3-205, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AC116366.3, Length 8,032 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC116366.3-205ENST00000640655 HECTD4Q9Y4D8 3996 aa3.35□□□□□ -1.87
AC116366.3-205ENST00000640655 ALMS1Q8TCU4 4167 aa3.34□□□□□ -1.88
AC116366.3-205ENST00000640655 KRTAP10-12P60413 245 aa3.33□□□□□ -1.88
AC116366.3-205ENST00000640655 KRTAP3-2Q9BYR7 98 aa3.32□□□□□ -1.88
AC116366.3-205ENST00000640655 KRTAP3-3Q9BYR6 98 aa3.3□□□□□ -1.88
AC116366.3-205ENST00000640655 DNAH2Q9P225 4427 aa3.3□□□□□ -1.88
AC116366.3-205ENST00000640655 KRTAP23-1A1A580 65 aa3.28□□□□□ -1.88
AC116366.3-205ENST00000640655 CRCT1Q9UGL9 99 aa3.27□□□□□ -1.89
AC116366.3-205ENST00000640655 KRTAP12-3P60328 96 aa3.26□□□□□ -1.89
AC116366.3-205ENST00000640655 DNAH1Q9P2D7 4330 aa3.22□□□□□ -1.89
AC116366.3-205ENST00000640655 PRKDCP78527 4128 aaKnown RBP3.22□□□□□ -1.89
AC116366.3-205ENST00000640655 LCE3AQ5TA76 89 aa3.18□□□□□ -1.9
AC116366.3-205ENST00000640655 MT1HL1P0DM35 61 aa3.15□□□□□ -1.91
AC116366.3-205ENST00000640655 DNAH6Q9C0G6 4158 aa3.15□□□□□ -1.91
AC116366.3-205ENST00000640655 DNAH10Q8IVF4 4471 aa3.15□□□□□ -1.91
AC116366.3-205ENST00000640655 KRTAP10-5P60370 271 aa3.11□□□□□ -1.91
AC116366.3-205ENST00000640655 DNAH9Q9NYC9 4486 aa3.08□□□□□ -1.92
AC116366.3-205ENST00000640655 KRTAP4-5Q9BYR2 181 aa3.08□□□□□ -1.92
AC116366.3-205ENST00000640655 LORP23490 312 aaPredicted RBP3.04□□□□□ -1.92
AC116366.3-205ENST00000640655 FAT2Q9NYQ8 4349 aa3.04□□□□□ -1.92
AC116366.3-205ENST00000640655 KRTAP10-4P60372 401 aaPredicted RBP3.03□□□□□ -1.93
AC116366.3-205ENST00000640655 FLGP20930 4061 aaPredicted RBP3.01□□□□□ -1.93
AC116366.3-205ENST00000640655 KRTAP8-1Q8IUC2 63 aa2.99□□□□□ -1.93
AC116366.3-205ENST00000640655 VPS13DQ5THJ4 4388 aa2.96□□□□□ -1.93
AC116366.3-205ENST00000640655 DYNC2H1Q8NCM8 4307 aaKnown RBP2.94□□□□□ -1.94
AC116366.3-205ENST00000640655 PKHD1P08F94 4074 aa2.93□□□□□ -1.94
AC116366.3-205ENST00000640655 DNAH11Q96DT5 4516 aa2.92□□□□□ -1.94
AC116366.3-205ENST00000640655 DNAH8Q96JB1 4490 aa2.92□□□□□ -1.94
AC116366.3-205ENST00000640655 STARD9Q9P2P6 4700 aa2.91□□□□□ -1.94
AC116366.3-205ENST00000640655 DNAH17Q9UFH2 4485 aa2.89□□□□□ -1.95
AC116366.3-205ENST00000640655 PKHD1L1Q86WI1 4243 aa2.86□□□□□ -1.95
AC116366.3-205ENST00000640655 LCE2DQ5TA82 110 aaPredicted RBP2.86□□□□□ -1.95
AC116366.3-205ENST00000640655 SPRR2GQ9BYE4 73 aa2.85□□□□□ -1.95
AC116366.3-205ENST00000640655 PLECQ15149 4684 aaKnown RBP2.84□□□□□ -1.95
AC116366.3-205ENST00000640655 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.96
AC116366.3-205ENST00000640655 KRTAP10-7P60409 375 aaPredicted RBP2.81□□□□□ -1.96
AC116366.3-205ENST00000640655 KRTAP19-5Q3LI72 72 aa2.8□□□□□ -1.96
AC116366.3-205ENST00000640655 RYR1P21817 5038 aa2.8□□□□□ -1.96
AC116366.3-205ENST00000640655 MT1HP80294 61 aa2.79□□□□□ -1.96
AC116366.3-205ENST00000640655 KRTAP19-4Q3LI73 84 aa2.78□□□□□ -1.96
AC116366.3-205ENST00000640655 SPRR2FQ96RM1 72 aa2.77□□□□□ -1.97
AC116366.3-205ENST00000640655 KRTAP4-1Q9BYQ7 146 aa2.77□□□□□ -1.97
AC116366.3-205ENST00000640655 PKD1P98161 4303 aa2.76□□□□□ -1.97
AC116366.3-205ENST00000640655 MT2AP02795 61 aa2.75□□□□□ -1.97
AC116366.3-205ENST00000640655 TNXBP22105 4242 aa2.73□□□□□ -1.97
AC116366.3-205ENST00000640655 LRP1BQ9NZR2 4599 aa2.71□□□□□ -1.98
AC116366.3-205ENST00000640655 MT1FP04733 61 aa2.69□□□□□ -1.98
AC116366.3-205ENST00000640655 DNAH5Q8TE73 4624 aa2.68□□□□□ -1.98
AC116366.3-205ENST00000640655 KRTAP12-4P60329 112 aa2.67□□□□□ -1.98
AC116366.3-205ENST00000640655 FAT1Q14517 4588 aa2.65□□□□□ -1.99
AC116366.3-205ENST00000640655 LCE3BQ5TA77 95 aa2.65□□□□□ -1.99
AC116366.3-205ENST00000640655 SPRR2EP22531 72 aa2.63□□□□□ -1.99
AC116366.3-205ENST00000640655 SPRR2BP35325 72 aa2.63□□□□□ -1.99
AC116366.3-205ENST00000640655 SPRR2AP35326 72 aa2.63□□□□□ -1.99
AC116366.3-205ENST00000640655 FAT3Q8TDW7 4589 aa2.62□□□□□ -1.99
AC116366.3-205ENST00000640655 HSPG2P98160 4391 aa2.6□□□□□ -1.99
AC116366.3-205ENST00000640655 LPAP08519 4548 aa2.58□□□□□ -2
AC116366.3-205ENST00000640655 SPRR5A0A1B0GTR4 108 aa2.58□□□□□ -2
AC116366.3-205ENST00000640655 APOBP04114 4563 aaKnown RBP2.57□□□□□ -2
AC116366.3-205ENST00000640655 KRTAP19-8Q3LI54 63 aa2.56□□□□□ -2
AC116366.3-205ENST00000640655 DYNC1H1Q14204 4646 aaKnown RBP2.56□□□□□ -2
AC116366.3-205ENST00000640655 KRTAP19-1Q8IUB9 90 aa2.56□□□□□ -2
AC116366.3-205ENST00000640655 LRP1Q07954 4544 aaKnown RBP2.55□□□□□ -2
AC116366.3-205ENST00000640655 SACSQ9NZJ4 4579 aa2.54□□□□□ -2
AC116366.3-205ENST00000640655 MT1GP13640 62 aa2.54□□□□□ -2
AC116366.3-205ENST00000640655 SPRR2DP22532 72 aa2.54□□□□□ -2
AC116366.3-205ENST00000640655 LCE2BO14633 110 aa2.53□□□□□ -2
AC116366.3-205ENST00000640655 MT1XP80297 61 aa2.53□□□□□ -2
AC116366.3-205ENST00000640655 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
AC116366.3-205ENST00000640655 MYCBP2O75592 4640 aa2.49□□□□□ -2.01
AC116366.3-205ENST00000640655 LCE3EQ5T5B0 92 aa2.49□□□□□ -2.01
AC116366.3-205ENST00000640655 MT1BP07438 61 aa2.43□□□□□ -2.02
AC116366.3-205ENST00000640655 KRTAP4-8A0A0G2JLE6 195 aa2.42□□□□□ -2.02
AC116366.3-205ENST00000640655 KRTAP4-8Q9BYQ9 185 aa2.42□□□□□ -2.02
AC116366.3-205ENST00000640655 HERC1Q15751 4861 aa2.41□□□□□ -2.02
AC116366.3-205ENST00000640655 KRTAP17-1Q9BYP8 105 aa2.41□□□□□ -2.02
AC116366.3-205ENST00000640655 KRTAP9-8Q9BYQ0 159 aa2.4□□□□□ -2.03
AC116366.3-205ENST00000640655 MT1LQ93083 61 aa2.38□□□□□ -2.03
AC116366.3-205ENST00000640655 LCE2CQ5TA81 110 aa2.37□□□□□ -2.03
AC116366.3-205ENST00000640655 PRM1P04553 51 aa2.35□□□□□ -2.03
AC116366.3-205ENST00000640655 KRTAP19-3Q7Z4W3 81 aa2.35□□□□□ -2.03
AC116366.3-205ENST00000640655 KRTAP9-3Q9BYQ3 159 aa2.33□□□□□ -2.04
AC116366.3-205ENST00000640655 KRTAP4-7Q9BYR0 210 aa2.31□□□□□ -2.04
AC116366.3-205ENST00000640655 LRP2P98164 4655 aa2.3□□□□□ -2.04
AC116366.3-205ENST00000640655 MT4P47944 62 aa2.3□□□□□ -2.04
AC116366.3-205ENST00000640655 MT1EP04732 61 aa2.29□□□□□ -2.04
AC116366.3-205ENST00000640655 DNHD1Q96M86 4753 aa2.27□□□□□ -2.05
AC116366.3-205ENST00000640655 MT3P25713 68 aa2.27□□□□□ -2.05
AC116366.3-205ENST00000640655 MUC17Q685J3 4493 aa2.25□□□□□ -2.05
AC116366.3-205ENST00000640655 PCLOQ9Y6V0 5065 aa2.25□□□□□ -2.05
AC116366.3-205ENST00000640655 MT1MQ8N339 61 aa2.22□□□□□ -2.05
AC116366.3-205ENST00000640655 LOC100996750A0A140TA64 210 aa2.2□□□□□ -2.06
AC116366.3-205ENST00000640655 KRTAP4-6Q9BYQ5 205 aa2.19□□□□□ -2.06
AC116366.3-205ENST00000640655 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
AC116366.3-205ENST00000640655 LCE1DQ5T752 114 aa2.18□□□□□ -2.06
AC116366.3-205ENST00000640655 KRTAP9-2Q9BYQ4 174 aa2.17□□□□□ -2.06
AC116366.3-205ENST00000640655 HYDINQ4G0P3 5121 aa2.16□□□□□ -2.06
AC116366.3-205ENST00000640655 SYNE2Q8WXH0 6885 aaKnown RBP2.16□□□□□ -2.06
AC116366.3-205ENST00000640655 RYR3Q15413 4870 aa2.15□□□□□ -2.07
AC116366.3-205ENST00000640655 KRTAP4-3Q9BYR4 195 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms