RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 SPINK8P0C7L1 97 aa0.47□□□□□ -2.33
ATM-230ENST00000640388 SMIM4Q8WVI0 70 aa0.47□□□□□ -2.33
ATM-230ENST00000640388 CMC2Q9NRP2 79 aa0.47□□□□□ -2.33
ATM-230ENST00000640388 V9GYH0 126 aa0.47□□□□□ -2.33
ATM-230ENST00000640388 NMBP08949 121 aa0.46□□□□□ -2.34
ATM-230ENST00000640388 COX17Q14061 63 aa0.46□□□□□ -2.34
ATM-230ENST00000640388 SSBP3-AS1Q7Z2R9 100 aa0.46□□□□□ -2.34
ATM-230ENST00000640388 CDC42SE2Q9NRR3 84 aa0.46□□□□□ -2.34
ATM-230ENST00000640388 TMEM218A2RU14 115 aa0.45□□□□□ -2.34
ATM-230ENST00000640388 NAP1L6A6NFF2 107 aa0.45□□□□□ -2.34
ATM-230ENST00000640388 UQCR11O14957 56 aa0.45□□□□□ -2.34
ATM-230ENST00000640388 S100A13Q99584 98 aa0.45□□□□□ -2.34
ATM-230ENST00000640388 C6orf48Q9UBA6 75 aa0.45□□□□□ -2.34
ATM-230ENST00000640388 TRBV25-1A0A075B6N4 114 aa0.44□□□□□ -2.34
ATM-230ENST00000640388 F8VRH5 84 aa0.44□□□□□ -2.34
ATM-230ENST00000640388 SNCAP37840 140 aa0.44□□□□□ -2.34
ATM-230ENST00000640388 GNG11P61952 73 aa0.44□□□□□ -2.34
ATM-230ENST00000640388 KRTAP19-5Q3LI72 72 aa0.44□□□□□ -2.34
ATM-230ENST00000640388 ACBD7Q8N6N7 88 aa0.44□□□□□ -2.34
ATM-230ENST00000640388 UQCR10Q9UDW1 63 aa0.44□□□□□ -2.34
ATM-230ENST00000640388 LINC01558Q9Y6Z2 57 aa0.44□□□□□ -2.34
ATM-230ENST00000640388 CTXND1A0A1B0GTU2 59 aa0.43□□□□□ -2.34
ATM-230ENST00000640388 APOC3P02656 99 aa0.43□□□□□ -2.34
ATM-230ENST00000640388 KRTDAPP60985 99 aa0.43□□□□□ -2.34
ATM-230ENST00000640388 BAGE2Q86Y30 109 aa0.43□□□□□ -2.34
ATM-230ENST00000640388 TRAV22A0A0B4J277 110 aa0.42□□□□□ -2.34
ATM-230ENST00000640388 TRBV6-1A0A0K0K1D8 114 aa0.42□□□□□ -2.34
ATM-230ENST00000640388 CHKB-CPT1BH3BT56 60 aa0.42□□□□□ -2.34
ATM-230ENST00000640388 M0R3E3 92 aa0.42□□□□□ -2.34
ATM-230ENST00000640388 SFT2D2O95562 160 aa0.42□□□□□ -2.34
ATM-230ENST00000640388 COX6CP09669 75 aa0.42□□□□□ -2.34
ATM-230ENST00000640388 TMEM170BQ5T4T1 132 aa0.42□□□□□ -2.34
ATM-230ENST00000640388 FAM213BQ8TBF2 198 aa0.42□□□□□ -2.34
ATM-230ENST00000640388 LINC00472Q9H8W2 130 aa0.42□□□□□ -2.34
ATM-230ENST00000640388 SNRPGP15A8MWD9 76 aa0.41□□□□□ -2.34
ATM-230ENST00000640388 MT1AP04731 61 aa0.41□□□□□ -2.34
ATM-230ENST00000640388 CNFNQ9BYD5 112 aa0.41□□□□□ -2.34
ATM-230ENST00000640388 NXT2Q9NPJ8 142 aaKnown RBP0.41□□□□□ -2.34
ATM-230ENST00000640388 PRO1854Q9UHT4 67 aa0.41□□□□□ -2.34
ATM-230ENST00000640388 LINC00959A0A1B0GUT2 108 aa0.4□□□□□ -2.35
ATM-230ENST00000640388 NDUFA1O15239 70 aa0.4□□□□□ -2.35
ATM-230ENST00000640388 S100A8P05109 93 aa0.4□□□□□ -2.35
ATM-230ENST00000640388 MGPP08493 103 aa0.4□□□□□ -2.35
ATM-230ENST00000640388 S100A10P60903 97 aa0.4□□□□□ -2.35
ATM-230ENST00000640388 ZNF815PA8K554 130 aa0.39□□□□□ -2.35
ATM-230ENST00000640388 NDUFC1O43677 76 aa0.39□□□□□ -2.35
ATM-230ENST00000640388 TRGV9Q99603 122 aa0.39□□□□□ -2.35
ATM-230ENST00000640388 MANBALQ9NQG1 85 aa0.39□□□□□ -2.35
ATM-230ENST00000640388 IGLC2P0DOY2 106 aa0.38□□□□□ -2.35
ATM-230ENST00000640388 WFDC13Q8IUB5 93 aa0.38□□□□□ -2.35
ATM-230ENST00000640388 AP4S1Q9Y587 144 aa0.38□□□□□ -2.35
ATM-230ENST00000640388 hADV29S1A0JD25 119 aa0.37□□□□□ -2.35
ATM-230ENST00000640388 CFDP00746 253 aaPredicted RBP0.37□□□□□ -2.35
ATM-230ENST00000640388 SEC11AP67812 179 aa0.37□□□□□ -2.35
ATM-230ENST00000640388 H1FX-AS1Q4G0G2 97 aa0.37□□□□□ -2.35
ATM-230ENST00000640388 Q6JHZ5 121 aa0.37□□□□□ -2.35
ATM-230ENST00000640388 ARL2-SNX15V9GYD0 113 aa0.37□□□□□ -2.35
ATM-230ENST00000640388 M0R143 59 aa0.36□□□□□ -2.35
ATM-230ENST00000640388 NMSQ5H8A3 153 aa0.36□□□□□ -2.35
ATM-230ENST00000640388 CRIPTQ9P021 101 aa0.36□□□□□ -2.35
ATM-230ENST00000640388 SPCS1Q9Y6A9 102 aa0.36□□□□□ -2.35
ATM-230ENST00000640388 TRAV21A0A0B4J279 112 aa0.35□□□□□ -2.35
ATM-230ENST00000640388 ATOX1O00244 68 aa0.35□□□□□ -2.35
ATM-230ENST00000640388 MPC2O95563 127 aa0.35□□□□□ -2.35
ATM-230ENST00000640388 SMIM11AP58511 58 aa0.35□□□□□ -2.35
ATM-230ENST00000640388 GNGT2O14610 69 aa0.34□□□□□ -2.36
ATM-230ENST00000640388 MT-ATP8P03928 68 aa0.34□□□□□ -2.36
ATM-230ENST00000640388 H3BVH4 76 aa0.33□□□□□ -2.36
ATM-230ENST00000640388 H7BZZ5 65 aa0.33□□□□□ -2.36
ATM-230ENST00000640388 Q5BKY6 102 aa0.33□□□□□ -2.36
ATM-230ENST00000640388 COL5A1-AS1Q5SY13 56 aa0.33□□□□□ -2.36
ATM-230ENST00000640388 PMCHL2Q9BQD1 86 aa0.33□□□□□ -2.36
ATM-230ENST00000640388 TP53AIP1Q9HCN2 124 aa0.33□□□□□ -2.36
ATM-230ENST00000640388 CACFD1Q9UGQ2 172 aa0.33□□□□□ -2.36
ATM-230ENST00000640388 TRBV7-7A0A0K0K1E9 115 aa0.32□□□□□ -2.36
ATM-230ENST00000640388 C10orf113Q5VZT2 155 aa0.32□□□□□ -2.36
ATM-230ENST00000640388 SERP2Q8N6R1 65 aa0.32□□□□□ -2.36
ATM-230ENST00000640388 PRO1933Q9H354 126 aa0.32□□□□□ -2.36
ATM-230ENST00000640388 A0A0G2JND7 137 aa0.31□□□□□ -2.36
ATM-230ENST00000640388 PMCHL1Q16048 86 aa0.31□□□□□ -2.36
ATM-230ENST00000640388 SFTA2Q6UW10 78 aa0.31□□□□□ -2.36
ATM-230ENST00000640388 Q8IZM0 81 aa0.31□□□□□ -2.36
ATM-230ENST00000640388 SNHG12Q9BXW3 62 aa0.31□□□□□ -2.36
ATM-230ENST00000640388 CEBPZOSA8MTT3 80 aa0.3□□□□□ -2.36
ATM-230ENST00000640388 SYS1-DBNDD2H3BUS1 97 aa0.3□□□□□ -2.36
ATM-230ENST00000640388 TRBV7-4A0A0J9YYF1 115 aa0.29□□□□□ -2.36
ATM-230ENST00000640388 SPRR1BP22528 89 aa0.29□□□□□ -2.36
ATM-230ENST00000640388 VAMP8Q9BV40 100 aa0.29□□□□□ -2.36
ATM-230ENST00000640388 FXYD6Q9H0Q3 95 aa0.29□□□□□ -2.36
ATM-230ENST00000640388 ARMS2P0C7Q2 107 aa0.28□□□□□ -2.36
ATM-230ENST00000640388 C7orf77A4D0Y5 90 aa0.27□□□□□ -2.37
ATM-230ENST00000640388 M0QY20 66 aa0.27□□□□□ -2.37
ATM-230ENST00000640388 SPRR1AP35321 89 aa0.27□□□□□ -2.37
ATM-230ENST00000640388 ALKAL2Q6UX46 152 aa0.27□□□□□ -2.37
ATM-230ENST00000640388 A0A087WVE0 104 aa0.26□□□□□ -2.37
ATM-230ENST00000640388 CRIP1P50238 77 aa0.25□□□□□ -2.37
ATM-230ENST00000640388 ETDCA0A1B0GVM5 59 aa0.24□□□□□ -2.37
ATM-230ENST00000640388 F8WEM9 126 aa0.24□□□□□ -2.37
ATM-230ENST00000640388 H0Y9P7 68 aa0.24□□□□□ -2.37
ATM-230ENST00000640388 FAUP35544 74 aaKnown RBP0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms