RNA–Protein interactions for RNA: ENST00000639496.1

KCNQ3-208, Transcript of potassium voltage-gated channel subfamily Q member 3, humanhuman

TSL 5

Gene KCNQ3, Length 4,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3-208ENST00000639496 VPS13CQ709C8 3753 aa4.31□□□□□ -1.72
KCNQ3-208ENST00000639496 LORP23490 312 aaPredicted RBP4.26□□□□□ -1.73
KCNQ3-208ENST00000639496 PLECQ15149 4684 aaKnown RBP4.24□□□□□ -1.73
KCNQ3-208ENST00000639496 MT1HP80294 61 aa4.2□□□□□ -1.74
KCNQ3-208ENST00000639496 DNAH5Q8TE73 4624 aa4.2□□□□□ -1.74
KCNQ3-208ENST00000639496 HUWE1Q7Z6Z7 4374 aaKnown RBP4.19□□□□□ -1.74
KCNQ3-208ENST00000639496 MT2AP02795 61 aa4.16□□□□□ -1.74
KCNQ3-208ENST00000639496 KRTAP10-5P60370 271 aa4.16□□□□□ -1.74
KCNQ3-208ENST00000639496 KRTAP4-1Q9BYQ7 146 aa4.15□□□□□ -1.74
KCNQ3-208ENST00000639496 ALMS1Q8TCU4 4167 aa4.15□□□□□ -1.74
KCNQ3-208ENST00000639496 ZNF469Q96JG9 3925 aaPredicted RBP4.13□□□□□ -1.75
KCNQ3-208ENST00000639496 DNHD1Q96M86 4753 aa4.13□□□□□ -1.75
KCNQ3-208ENST00000639496 KRTAP17-1Q9BYP8 105 aa4.12□□□□□ -1.75
KCNQ3-208ENST00000639496 FAT1Q14517 4588 aa4.11□□□□□ -1.75
KCNQ3-208ENST00000639496 CSMD3Q7Z407 3707 aa4.11□□□□□ -1.75
KCNQ3-208ENST00000639496 SPRR2GQ9BYE4 73 aa4.11□□□□□ -1.75
KCNQ3-208ENST00000639496 DNAH11Q96DT5 4516 aa4.1□□□□□ -1.75
KCNQ3-208ENST00000639496 AKAP9Q99996 3911 aa4.08□□□□□ -1.76
KCNQ3-208ENST00000639496 SPRR2FQ96RM1 72 aa4.06□□□□□ -1.76
KCNQ3-208ENST00000639496 KRTAP10-7P60409 375 aaPredicted RBP4.05□□□□□ -1.76
KCNQ3-208ENST00000639496 DNAH1Q9P2D7 4330 aa4.04□□□□□ -1.76
KCNQ3-208ENST00000639496 DNAH10Q8IVF4 4471 aa4.03□□□□□ -1.76
KCNQ3-208ENST00000639496 RYR1P21817 5038 aa4.03□□□□□ -1.76
KCNQ3-208ENST00000639496 MT1FP04733 61 aa4.03□□□□□ -1.76
KCNQ3-208ENST00000639496 DNAH9Q9NYC9 4486 aa4.01□□□□□ -1.77
KCNQ3-208ENST00000639496 KRTAP19-4Q3LI73 84 aa3.99□□□□□ -1.77
KCNQ3-208ENST00000639496 DYNC1H1Q14204 4646 aaKnown RBP3.94□□□□□ -1.78
KCNQ3-208ENST00000639496 KRTAP19-5Q3LI72 72 aa3.91□□□□□ -1.78
KCNQ3-208ENST00000639496 SACSQ9NZJ4 4579 aa3.9□□□□□ -1.79
KCNQ3-208ENST00000639496 DNAH2Q9P225 4427 aa3.88□□□□□ -1.79
KCNQ3-208ENST00000639496 DNAH8Q96JB1 4490 aa3.85□□□□□ -1.79
KCNQ3-208ENST00000639496 DNAH17Q9UFH2 4485 aa3.85□□□□□ -1.79
KCNQ3-208ENST00000639496 LRP1BQ9NZR2 4599 aa3.84□□□□□ -1.79
KCNQ3-208ENST00000639496 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
KCNQ3-208ENST00000639496 KRTAP19-8Q3LI54 63 aa3.83□□□□□ -1.8
KCNQ3-208ENST00000639496 KIAA1109Q2LD37 5005 aa3.81□□□□□ -1.8
KCNQ3-208ENST00000639496 SPRR2EP22531 72 aa3.81□□□□□ -1.8
KCNQ3-208ENST00000639496 SPRR2BP35325 72 aa3.81□□□□□ -1.8
KCNQ3-208ENST00000639496 SPRR2AP35326 72 aa3.81□□□□□ -1.8
KCNQ3-208ENST00000639496 FAT3Q8TDW7 4589 aa3.8□□□□□ -1.8
KCNQ3-208ENST00000639496 VPS13DQ5THJ4 4388 aa3.79□□□□□ -1.8
KCNQ3-208ENST00000639496 KRTAP19-1Q8IUB9 90 aa3.77□□□□□ -1.81
KCNQ3-208ENST00000639496 RYR3Q15413 4870 aa3.76□□□□□ -1.81
KCNQ3-208ENST00000639496 LRP1Q07954 4544 aaKnown RBP3.75□□□□□ -1.81
KCNQ3-208ENST00000639496 FAT2Q9NYQ8 4349 aa3.72□□□□□ -1.81
KCNQ3-208ENST00000639496 APOBP04114 4563 aaKnown RBP3.72□□□□□ -1.81
KCNQ3-208ENST00000639496 SPRR2DP22532 72 aa3.7□□□□□ -1.82
KCNQ3-208ENST00000639496 STARD9Q9P2P6 4700 aa3.69□□□□□ -1.82
KCNQ3-208ENST00000639496 LCE2BO14633 110 aa3.69□□□□□ -1.82
KCNQ3-208ENST00000639496 KRTAP12-4P60329 112 aa3.69□□□□□ -1.82
KCNQ3-208ENST00000639496 ANK2Q01484 3957 aa3.68□□□□□ -1.82
KCNQ3-208ENST00000639496 DYNC2H1Q8NCM8 4307 aaKnown RBP3.66□□□□□ -1.82
KCNQ3-208ENST00000639496 DNAH3Q8TD57 4116 aa3.66□□□□□ -1.82
KCNQ3-208ENST00000639496 MT1XP80297 61 aa3.65□□□□□ -1.83
KCNQ3-208ENST00000639496 MT1GP13640 62 aa3.65□□□□□ -1.83
KCNQ3-208ENST00000639496 KRTAP9-8Q9BYQ0 159 aa3.65□□□□□ -1.83
KCNQ3-208ENST00000639496 MT1BP07438 61 aa3.64□□□□□ -1.83
KCNQ3-208ENST00000639496 RYR2Q92736 4967 aa3.62□□□□□ -1.83
KCNQ3-208ENST00000639496 PCLOQ9Y6V0 5065 aa3.62□□□□□ -1.83
KCNQ3-208ENST00000639496 HERC2O95714 4834 aa3.62□□□□□ -1.83
KCNQ3-208ENST00000639496 MYCBP2O75592 4640 aa3.62□□□□□ -1.83
KCNQ3-208ENST00000639496 KMT2AQ03164 3969 aa3.61□□□□□ -1.83
KCNQ3-208ENST00000639496 EPPK1P58107 5090 aaKnown RBP3.61□□□□□ -1.83
KCNQ3-208ENST00000639496 KRTAP9-3Q9BYQ3 159 aa3.58□□□□□ -1.84
KCNQ3-208ENST00000639496 BIRC6Q9NR09 4857 aa3.58□□□□□ -1.84
KCNQ3-208ENST00000639496 LCE3BQ5TA77 95 aa3.58□□□□□ -1.84
KCNQ3-208ENST00000639496 PRKDCP78527 4128 aaKnown RBP3.58□□□□□ -1.84
KCNQ3-208ENST00000639496 FRAS1Q86XX4 4008 aa3.57□□□□□ -1.84
KCNQ3-208ENST00000639496 VPS13BQ7Z7G8 4022 aa3.57□□□□□ -1.84
KCNQ3-208ENST00000639496 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
KCNQ3-208ENST00000639496 HERC1Q15751 4861 aa3.57□□□□□ -1.84
KCNQ3-208ENST00000639496 LCE2CQ5TA81 110 aa3.55□□□□□ -1.84
KCNQ3-208ENST00000639496 LYSTQ99698 3801 aa3.55□□□□□ -1.84
KCNQ3-208ENST00000639496 KRTAP4-8A0A0G2JLE6 195 aa3.52□□□□□ -1.85
KCNQ3-208ENST00000639496 KRTAP4-8Q9BYQ9 185 aa3.52□□□□□ -1.85
KCNQ3-208ENST00000639496 PKD1P98161 4303 aa3.49□□□□□ -1.85
KCNQ3-208ENST00000639496 HECTD4Q9Y4D8 3996 aa3.48□□□□□ -1.85
KCNQ3-208ENST00000639496 CMYA5Q8N3K9 4069 aa3.47□□□□□ -1.85
KCNQ3-208ENST00000639496 DNAH6Q9C0G6 4158 aa3.47□□□□□ -1.85
KCNQ3-208ENST00000639496 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.86
KCNQ3-208ENST00000639496 LOC100996750A0A140TA64 210 aa3.45□□□□□ -1.86
KCNQ3-208ENST00000639496 KRTAP4-6Q9BYQ5 205 aa3.45□□□□□ -1.86
KCNQ3-208ENST00000639496 DNAH7Q8WXX0 4024 aa3.44□□□□□ -1.86
KCNQ3-208ENST00000639496 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
KCNQ3-208ENST00000639496 HSPG2P98160 4391 aa3.41□□□□□ -1.86
KCNQ3-208ENST00000639496 LRP2P98164 4655 aa3.4□□□□□ -1.87
KCNQ3-208ENST00000639496 HYDINQ4G0P3 5121 aa3.39□□□□□ -1.87
KCNQ3-208ENST00000639496 MT1LQ93083 61 aa3.38□□□□□ -1.87
KCNQ3-208ENST00000639496 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
KCNQ3-208ENST00000639496 KRTAP9-2Q9BYQ4 174 aa3.37□□□□□ -1.87
KCNQ3-208ENST00000639496 LCE2AQ5TA79 106 aaPredicted RBP3.37□□□□□ -1.87
KCNQ3-208ENST00000639496 MT1EP04732 61 aa3.34□□□□□ -1.88
KCNQ3-208ENST00000639496 KRTAP19-6Q3LI70 58 aa3.34□□□□□ -1.88
KCNQ3-208ENST00000639496 KMT2CQ8NEZ4 4911 aaKnown RBP3.33□□□□□ -1.88
KCNQ3-208ENST00000639496 KRTAP19-2Q3LHN2 52 aa3.32□□□□□ -1.88
KCNQ3-208ENST00000639496 SPRR5A0A1B0GTR4 108 aa3.31□□□□□ -1.88
KCNQ3-208ENST00000639496 UBR4Q5T4S7 5183 aa3.3□□□□□ -1.88
KCNQ3-208ENST00000639496 ABCA13Q86UQ4 5058 aa3.29□□□□□ -1.88
KCNQ3-208ENST00000639496 MT3P25713 68 aa3.29□□□□□ -1.88
KCNQ3-208ENST00000639496 PKHD1L1Q86WI1 4243 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 269.9 ms