RNA–Protein interactions for RNA: ENST00000639486.1

KCNMA1-261, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 8,850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-261ENST00000639486 DNAH7Q8WXX0 4024 aa7.14□□□□□ -1.27
KCNMA1-261ENST00000639486 HECTD4Q9Y4D8 3996 aa7.14□□□□□ -1.27
KCNMA1-261ENST00000639486 DNAH3Q8TD57 4116 aa7.14□□□□□ -1.27
KCNMA1-261ENST00000639486 LCE3AQ5TA76 89 aa7.1□□□□□ -1.27
KCNMA1-261ENST00000639486 ANK2Q01484 3957 aa7.08□□□□□ -1.28
KCNMA1-261ENST00000639486 DNAH2Q9P225 4427 aa7.07□□□□□ -1.28
KCNMA1-261ENST00000639486 VPS13BQ7Z7G8 4022 aa7.03□□□□□ -1.28
KCNMA1-261ENST00000639486 ANK3Q12955 4377 aaKnown RBP6.99□□□□□ -1.29
KCNMA1-261ENST00000639486 KMT2AQ03164 3969 aa6.97□□□□□ -1.29
KCNMA1-261ENST00000639486 KRTAP10-5P60370 271 aa6.96□□□□□ -1.3
KCNMA1-261ENST00000639486 HUWE1Q7Z6Z7 4374 aaKnown RBP6.92□□□□□ -1.3
KCNMA1-261ENST00000639486 MT1HL1P0DM35 61 aa6.86□□□□□ -1.31
KCNMA1-261ENST00000639486 DNAH6Q9C0G6 4158 aa6.84□□□□□ -1.31
KCNMA1-261ENST00000639486 DNAH1Q9P2D7 4330 aa6.7□□□□□ -1.34
KCNMA1-261ENST00000639486 LORP23490 312 aaPredicted RBP6.66□□□□□ -1.34
KCNMA1-261ENST00000639486 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
KCNMA1-261ENST00000639486 KRTAP10-4P60372 401 aaPredicted RBP6.63□□□□□ -1.35
KCNMA1-261ENST00000639486 FLGP20930 4061 aaPredicted RBP6.5□□□□□ -1.37
KCNMA1-261ENST00000639486 PRKDCP78527 4128 aaKnown RBP6.43□□□□□ -1.38
KCNMA1-261ENST00000639486 LCE3CQ5T5A8 94 aa6.42□□□□□ -1.38
KCNMA1-261ENST00000639486 DNAH10Q8IVF4 4471 aa6.4□□□□□ -1.38
KCNMA1-261ENST00000639486 SPRR2GQ9BYE4 73 aa6.36□□□□□ -1.39
KCNMA1-261ENST00000639486 KRTAP19-4Q3LI73 84 aa6.34□□□□□ -1.4
KCNMA1-261ENST00000639486 KRTAP4-5Q9BYR2 181 aa6.31□□□□□ -1.4
KCNMA1-261ENST00000639486 KRTAP10-7P60409 375 aaPredicted RBP6.29□□□□□ -1.4
KCNMA1-261ENST00000639486 DNAH8Q96JB1 4490 aa6.28□□□□□ -1.4
KCNMA1-261ENST00000639486 KRTAP19-5Q3LI72 72 aa6.26□□□□□ -1.41
KCNMA1-261ENST00000639486 FAT2Q9NYQ8 4349 aa6.23□□□□□ -1.41
KCNMA1-261ENST00000639486 DNAH9Q9NYC9 4486 aa6.2□□□□□ -1.42
KCNMA1-261ENST00000639486 VPS13DQ5THJ4 4388 aa6.17□□□□□ -1.42
KCNMA1-261ENST00000639486 DNAH17Q9UFH2 4485 aa6.14□□□□□ -1.43
KCNMA1-261ENST00000639486 DYNC2H1Q8NCM8 4307 aaKnown RBP6.12□□□□□ -1.43
KCNMA1-261ENST00000639486 DNAH11Q96DT5 4516 aa6.1□□□□□ -1.43
KCNMA1-261ENST00000639486 MT1HP80294 61 aa6.09□□□□□ -1.43
KCNMA1-261ENST00000639486 SPRR2FQ96RM1 72 aa6.02□□□□□ -1.45
KCNMA1-261ENST00000639486 KRTAP4-1Q9BYQ7 146 aa6.01□□□□□ -1.45
KCNMA1-261ENST00000639486 MT2AP02795 61 aa6□□□□□ -1.45
KCNMA1-261ENST00000639486 KRTAP12-4P60329 112 aa6□□□□□ -1.45
KCNMA1-261ENST00000639486 STARD9Q9P2P6 4700 aa5.96□□□□□ -1.45
KCNMA1-261ENST00000639486 PKHD1L1Q86WI1 4243 aa5.96□□□□□ -1.46
KCNMA1-261ENST00000639486 LCE3BQ5TA77 95 aa5.93□□□□□ -1.46
KCNMA1-261ENST00000639486 MT1FP04733 61 aa5.87□□□□□ -1.47
KCNMA1-261ENST00000639486 PLECQ15149 4684 aaKnown RBP5.86□□□□□ -1.47
KCNMA1-261ENST00000639486 SPRR5A0A1B0GTR4 108 aa5.86□□□□□ -1.47
KCNMA1-261ENST00000639486 PKHD1P08F94 4074 aa5.84□□□□□ -1.48
KCNMA1-261ENST00000639486 DNAH5Q8TE73 4624 aa5.72□□□□□ -1.49
KCNMA1-261ENST00000639486 LCE3DQ9BYE3 92 aa5.68□□□□□ -1.5
KCNMA1-261ENST00000639486 PKD1P98161 4303 aa5.67□□□□□ -1.5
KCNMA1-261ENST00000639486 KRTAP19-8Q3LI54 63 aa5.65□□□□□ -1.5
KCNMA1-261ENST00000639486 MT1GP13640 62 aa5.63□□□□□ -1.51
KCNMA1-261ENST00000639486 MT1XP80297 61 aa5.62□□□□□ -1.51
KCNMA1-261ENST00000639486 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
KCNMA1-261ENST00000639486 LCE3EQ5T5B0 92 aa5.58□□□□□ -1.52
KCNMA1-261ENST00000639486 SPRR2EP22531 72 aa5.57□□□□□ -1.52
KCNMA1-261ENST00000639486 SPRR2BP35325 72 aa5.57□□□□□ -1.52
KCNMA1-261ENST00000639486 SPRR2AP35326 72 aa5.57□□□□□ -1.52
KCNMA1-261ENST00000639486 LRP1BQ9NZR2 4599 aa5.55□□□□□ -1.52
KCNMA1-261ENST00000639486 APOBP04114 4563 aaKnown RBP5.51□□□□□ -1.53
KCNMA1-261ENST00000639486 LCE2BO14633 110 aa5.51□□□□□ -1.53
KCNMA1-261ENST00000639486 TNXBP22105 4242 aa5.46□□□□□ -1.53
KCNMA1-261ENST00000639486 FAT1Q14517 4588 aa5.44□□□□□ -1.54
KCNMA1-261ENST00000639486 LRP1Q07954 4544 aaKnown RBP5.43□□□□□ -1.54
KCNMA1-261ENST00000639486 SPRR2DP22532 72 aa5.41□□□□□ -1.54
KCNMA1-261ENST00000639486 DYNC1H1Q14204 4646 aaKnown RBP5.35□□□□□ -1.55
KCNMA1-261ENST00000639486 MT1LQ93083 61 aa5.32□□□□□ -1.56
KCNMA1-261ENST00000639486 HSPG2P98160 4391 aa5.31□□□□□ -1.56
KCNMA1-261ENST00000639486 PRM1P04553 51 aa5.3□□□□□ -1.56
KCNMA1-261ENST00000639486 MYCBP2O75592 4640 aa5.29□□□□□ -1.56
KCNMA1-261ENST00000639486 MT1BP07438 61 aa5.29□□□□□ -1.56
KCNMA1-261ENST00000639486 MT3P25713 68 aa5.28□□□□□ -1.56
KCNMA1-261ENST00000639486 FAT3Q8TDW7 4589 aa5.28□□□□□ -1.56
KCNMA1-261ENST00000639486 SACSQ9NZJ4 4579 aa5.27□□□□□ -1.57
KCNMA1-261ENST00000639486 KRTAP4-8A0A0G2JLE6 195 aa5.25□□□□□ -1.57
KCNMA1-261ENST00000639486 KRTAP4-8Q9BYQ9 185 aa5.25□□□□□ -1.57
KCNMA1-261ENST00000639486 KRTAP9-8Q9BYQ0 159 aa5.22□□□□□ -1.57
KCNMA1-261ENST00000639486 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
KCNMA1-261ENST00000639486 LCE2CQ5TA81 110 aa5.08□□□□□ -1.6
KCNMA1-261ENST00000639486 KRTAP9-3Q9BYQ3 159 aa5.07□□□□□ -1.6
KCNMA1-261ENST00000639486 MT1EP04732 61 aa5.07□□□□□ -1.6
KCNMA1-261ENST00000639486 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
KCNMA1-261ENST00000639486 LPAP08519 4548 aa4.97□□□□□ -1.61
KCNMA1-261ENST00000639486 LCE2DQ5TA82 110 aaPredicted RBP4.93□□□□□ -1.62
KCNMA1-261ENST00000639486 MT1MQ8N339 61 aa4.91□□□□□ -1.62
KCNMA1-261ENST00000639486 MUC17Q685J3 4493 aa4.86□□□□□ -1.63
KCNMA1-261ENST00000639486 LRP2P98164 4655 aa4.86□□□□□ -1.63
KCNMA1-261ENST00000639486 LOC100996750A0A140TA64 210 aa4.85□□□□□ -1.63
KCNMA1-261ENST00000639486 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
KCNMA1-261ENST00000639486 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
KCNMA1-261ENST00000639486 KRTAP2-1Q9BYU5 128 aa4.82□□□□□ -1.64
KCNMA1-261ENST00000639486 LCE1DQ5T752 114 aa4.8□□□□□ -1.64
KCNMA1-261ENST00000639486 LCE1BQ5T7P3 118 aa4.79□□□□□ -1.64
KCNMA1-261ENST00000639486 MT4P47944 62 aa4.78□□□□□ -1.64
KCNMA1-261ENST00000639486 MT1AP04731 61 aa4.72□□□□□ -1.65
KCNMA1-261ENST00000639486 KRTAP17-1Q9BYP8 105 aa4.68□□□□□ -1.66
KCNMA1-261ENST00000639486 DNHD1Q96M86 4753 aa4.66□□□□□ -1.66
KCNMA1-261ENST00000639486 RYR1P21817 5038 aa4.65□□□□□ -1.67
KCNMA1-261ENST00000639486 KRTAP4-3Q9BYR4 195 aa4.63□□□□□ -1.67
KCNMA1-261ENST00000639486 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
KCNMA1-261ENST00000639486 KRTAP19-2Q3LHN2 52 aa4.56□□□□□ -1.68
KCNMA1-261ENST00000639486 KRTAP6-2Q3LI66 62 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms