RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 EPPK1P58107 5090 aaKnown RBP-0.31□□□□□ -2.46
GYPB-216ENST00000638448 SPENQ96T58 3664 aaKnown RBP-0.32□□□□□ -2.46
GYPB-216ENST00000638448 M0QZ58 72 aa-0.32□□□□□ -2.46
GYPB-216ENST00000638448 WFDC10BQ8IUB3 73 aa-0.32□□□□□ -2.46
GYPB-216ENST00000638448 TEX15Q9BXT5 2789 aa-0.32□□□□□ -2.46
GYPB-216ENST00000638448 SPTBN5Q9NRC6 3674 aaKnown RBP-0.32□□□□□ -2.46
GYPB-216ENST00000638448 COL12A1Q99715 3063 aa-0.32□□□□□ -2.46
GYPB-216ENST00000638448 MAST1Q9Y2H9 1570 aa-0.32□□□□□ -2.46
GYPB-216ENST00000638448 EFCAB6Q5THR3 1501 aa-0.33□□□□□ -2.46
GYPB-216ENST00000638448 ALS2Q96Q42 1657 aa-0.33□□□□□ -2.46
GYPB-216ENST00000638448 DYNC1H1Q14204 4646 aaKnown RBP-0.33□□□□□ -2.46
GYPB-216ENST00000638448 PRXQ9BXM0 1461 aa-0.33□□□□□ -2.46
GYPB-216ENST00000638448 A8MTW9 85 aa-0.33□□□□□ -2.46
GYPB-216ENST00000638448 MT1HP80294 61 aa-0.33□□□□□ -2.46
GYPB-216ENST00000638448 CMYA5Q8N3K9 4069 aa-0.33□□□□□ -2.46
GYPB-216ENST00000638448 RELNP78509 3460 aa-0.33□□□□□ -2.46
GYPB-216ENST00000638448 COL6A5A8TX70 2615 aa-0.34□□□□□ -2.46
GYPB-216ENST00000638448 HYDINQ4G0P3 5121 aa-0.34□□□□□ -2.46
GYPB-216ENST00000638448 A0A1B0GUL6 1792 aa-0.34□□□□□ -2.46
GYPB-216ENST00000638448 MYO9AB2RTY4 2548 aa-0.34□□□□□ -2.46
GYPB-216ENST00000638448 DNAH7Q8WXX0 4024 aa-0.34□□□□□ -2.46
GYPB-216ENST00000638448 SMR3BP02814 79 aaPredicted RBP-0.34□□□□□ -2.46
GYPB-216ENST00000638448 KRTAP8-1Q8IUC2 63 aa-0.34□□□□□ -2.46
GYPB-216ENST00000638448 A0A0C4DFX4 3053 aa-0.35□□□□□ -2.47
GYPB-216ENST00000638448 DNHD1Q96M86 4753 aa-0.35□□□□□ -2.47
GYPB-216ENST00000638448 TRIOO75962 3097 aa-0.35□□□□□ -2.47
GYPB-216ENST00000638448 DNAH17Q9UFH2 4485 aa-0.35□□□□□ -2.47
GYPB-216ENST00000638448 C5orf42Q9H799 3197 aa-0.35□□□□□ -2.47
GYPB-216ENST00000638448 PLNP26678 52 aa-0.36□□□□□ -2.47
GYPB-216ENST00000638448 ITPR1Q14643 2758 aa-0.36□□□□□ -2.47
GYPB-216ENST00000638448 FAM208AQ9UK61 1670 aaKnown RBP-0.37□□□□□ -2.47
GYPB-216ENST00000638448 FRYQ5TBA9 3013 aa-0.37□□□□□ -2.47
GYPB-216ENST00000638448 AGLP35573 1532 aa-0.37□□□□□ -2.47
GYPB-216ENST00000638448 ERICH3Q5RHP9 1530 aa-0.37□□□□□ -2.47
GYPB-216ENST00000638448 KIF21BO75037 1637 aa-0.37□□□□□ -2.47
GYPB-216ENST00000638448 DNAH10Q8IVF4 4471 aa-0.37□□□□□ -2.47
GYPB-216ENST00000638448 BIRC6Q9NR09 4857 aa-0.37□□□□□ -2.47
GYPB-216ENST00000638448 CELSR3Q9NYQ7 3312 aa-0.37□□□□□ -2.47
GYPB-216ENST00000638448 PREX2Q70Z35 1606 aa-0.38□□□□□ -2.47
GYPB-216ENST00000638448 SPART-AS1P0CW21 52 aa-0.38□□□□□ -2.47
GYPB-216ENST00000638448 TFF3Q07654 80 aa-0.38□□□□□ -2.47
GYPB-216ENST00000638448 LRBAP50851 2863 aa-0.38□□□□□ -2.47
GYPB-216ENST00000638448 NEBP20929 6669 aa-0.39□□□□□ -2.47
GYPB-216ENST00000638448 DEFB131AP59861 70 aa-0.39□□□□□ -2.47
GYPB-216ENST00000638448 LAMA3Q16787 3333 aa-0.4□□□□□ -2.47
GYPB-216ENST00000638448 LINC01546A6NGU7 62 aa-0.4□□□□□ -2.47
GYPB-216ENST00000638448 SMIM2Q9BVW6 85 aa-0.4□□□□□ -2.47
GYPB-216ENST00000638448 CMC2Q9NRP2 79 aa-0.4□□□□□ -2.47
GYPB-216ENST00000638448 NIPBLQ6KC79 2804 aaeCLIP-0.4□□□□□ -2.47
GYPB-216ENST00000638448 LMO7Q8WWI1 1683 aa-0.4□□□□□ -2.47
GYPB-216ENST00000638448 CFAP46Q8IYW2 2715 aa-0.41□□□□□ -2.47
GYPB-216ENST00000638448 SYCP2Q9BX26 1530 aa-0.41□□□□□ -2.48
GYPB-216ENST00000638448 TRRAPQ9Y4A5 3859 aa-0.41□□□□□ -2.48
GYPB-216ENST00000638448 ADCY10Q96PN6 1610 aa-0.42□□□□□ -2.48
GYPB-216ENST00000638448 DNAH5Q8TE73 4624 aa-0.42□□□□□ -2.48
GYPB-216ENST00000638448 ADGRG4Q8IZF6 3080 aa-0.42□□□□□ -2.48
GYPB-216ENST00000638448 MT1EP04732 61 aa-0.42□□□□□ -2.48
GYPB-216ENST00000638448 POLR2KP53803 58 aaKnown RBP-0.42□□□□□ -2.48
GYPB-216ENST00000638448 MT1XP80297 61 aa-0.42□□□□□ -2.48
GYPB-216ENST00000638448 ABCA5Q8WWZ7 1642 aa-0.42□□□□□ -2.48
GYPB-216ENST00000638448 ABCC8Q09428 1581 aa-0.43□□□□□ -2.48
GYPB-216ENST00000638448 SRCAPQ6ZRS2 3230 aa-0.43□□□□□ -2.48
GYPB-216ENST00000638448 RNF213Q63HN8 5207 aa-0.43□□□□□ -2.48
GYPB-216ENST00000638448 CEP295Q9C0D2 2601 aa-0.43□□□□□ -2.48
GYPB-216ENST00000638448 MROH2AA6NES4 1674 aa-0.43□□□□□ -2.48
GYPB-216ENST00000638448 CSMD1Q96PZ7 3565 aa-0.44□□□□□ -2.48
GYPB-216ENST00000638448 RYR3Q15413 4870 aa-0.44□□□□□ -2.48
GYPB-216ENST00000638448 FANCD2Q9BXW9 1451 aa-0.45□□□□□ -2.48
GYPB-216ENST00000638448 MT1LQ93083 61 aa-0.45□□□□□ -2.48
GYPB-216ENST00000638448 CHD7Q9P2D1 2997 aa-0.45□□□□□ -2.48
GYPB-216ENST00000638448 LAMA2P24043 3122 aaKnown RBP-0.45□□□□□ -2.48
GYPB-216ENST00000638448 MGAQ8IWI9 3026 aa-0.46□□□□□ -2.48
GYPB-216ENST00000638448 KIAA1109Q2LD37 5005 aa-0.46□□□□□ -2.48
GYPB-216ENST00000638448 NRXN3Q9Y4C0 1643 aa-0.46□□□□□ -2.48
GYPB-216ENST00000638448 RYR2Q92736 4967 aa-0.46□□□□□ -2.48
GYPB-216ENST00000638448 DDX60Q8IY21 1712 aaKnown RBP-0.47□□□□□ -2.49
GYPB-216ENST00000638448 IQGAP1P46940 1657 aa-0.48□□□□□ -2.49
GYPB-216ENST00000638448 TLN1Q9Y490 2541 aaKnown RBP-0.48□□□□□ -2.49
GYPB-216ENST00000638448 SNRPGP15A8MWD9 76 aa-0.48□□□□□ -2.49
GYPB-216ENST00000638448 TRPM2O94759 1503 aa-0.48□□□□□ -2.49
GYPB-216ENST00000638448 ZFHX4Q86UP3 3567 aa-0.49□□□□□ -2.49
GYPB-216ENST00000638448 NDUFA1O15239 70 aa-0.49□□□□□ -2.49
GYPB-216ENST00000638448 LEAP2Q969E1 77 aa-0.49□□□□□ -2.49
GYPB-216ENST00000638448 ITPR2Q14571 2701 aa-0.49□□□□□ -2.49
GYPB-216ENST00000638448 NFAT5O94916 1531 aa-0.49□□□□□ -2.49
GYPB-216ENST00000638448 CLTCL1P53675 1640 aa-0.52□□□□□ -2.49
GYPB-216ENST00000638448 MT1HL1P0DM35 61 aa-0.52□□□□□ -2.49
GYPB-216ENST00000638448 MT1GP13640 62 aa-0.52□□□□□ -2.49
GYPB-216ENST00000638448 CSMD2Q7Z408 3487 aa-0.52□□□□□ -2.49
GYPB-216ENST00000638448 SMG1Q96Q15 3661 aaKnown RBP-0.53□□□□□ -2.49
GYPB-216ENST00000638448 CRYBG3Q68DQ2 2970 aa-0.54□□□□□ -2.5
GYPB-216ENST00000638448 DEFB4AO15263 64 aa-0.54□□□□□ -2.5
GYPB-216ENST00000638448 DEFB136Q30KP8 78 aa-0.54□□□□□ -2.5
GYPB-216ENST00000638448 CEP250Q9BV73 2442 aa-0.54□□□□□ -2.5
GYPB-216ENST00000638448 EYSQ5T1H1 3165 aa-0.55□□□□□ -2.5
GYPB-216ENST00000638448 MT2AP02795 61 aa-0.57□□□□□ -2.5
GYPB-216ENST00000638448 MT1MQ8N339 61 aa-0.57□□□□□ -2.5
GYPB-216ENST00000638448 DMXL2Q8TDJ6 3036 aa-0.58□□□□□ -2.5
GYPB-216ENST00000638448 TOMM5Q8N4H5 51 aa-0.58□□□□□ -2.5
GYPB-216ENST00000638448 VPS13CQ709C8 3753 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms