RNA–Protein interactions for RNA: ENST00000637651.1

EPB41L3-236, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

TSL 5

Gene EPB41L3, Length 6,962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-236ENST00000637651 MEGF8Q7Z7M0 2845 aa5.36□□□□□ -1.55
EPB41L3-236ENST00000637651 COL7A1Q02388 2944 aa5.33□□□□□ -1.56
EPB41L3-236ENST00000637651 CSMD2Q7Z408 3487 aa5.29□□□□□ -1.56
EPB41L3-236ENST00000637651 SPRR2DP22532 72 aa5.23□□□□□ -1.57
EPB41L3-236ENST00000637651 ALMS1Q8TCU4 4167 aa5.22□□□□□ -1.57
EPB41L3-236ENST00000637651 ANK3Q12955 4377 aaKnown RBP5.22□□□□□ -1.57
EPB41L3-236ENST00000637651 TRRAPQ9Y4A5 3859 aa5.21□□□□□ -1.58
EPB41L3-236ENST00000637651 KRTAP10-4P60372 401 aaPredicted RBP5.2□□□□□ -1.58
EPB41L3-236ENST00000637651 MT1HP80294 61 aa5.2□□□□□ -1.58
EPB41L3-236ENST00000637651 KRTAP19-5Q3LI72 72 aa5.19□□□□□ -1.58
EPB41L3-236ENST00000637651 LCE3BQ5TA77 95 aa5.15□□□□□ -1.58
EPB41L3-236ENST00000637651 VPS13CQ709C8 3753 aa5.12□□□□□ -1.59
EPB41L3-236ENST00000637651 LCE2BO14633 110 aa5.06□□□□□ -1.6
EPB41L3-236ENST00000637651 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
EPB41L3-236ENST00000637651 HUWE1Q7Z6Z7 4374 aaKnown RBP5.05□□□□□ -1.6
EPB41L3-236ENST00000637651 KRTAP12-4P60329 112 aa5.04□□□□□ -1.6
EPB41L3-236ENST00000637651 MT2AP02795 61 aa5.02□□□□□ -1.61
EPB41L3-236ENST00000637651 SPRR5A0A1B0GTR4 108 aa4.96□□□□□ -1.61
EPB41L3-236ENST00000637651 AKAP9Q99996 3911 aa4.94□□□□□ -1.62
EPB41L3-236ENST00000637651 KRTAP4-1Q9BYQ7 146 aa4.93□□□□□ -1.62
EPB41L3-236ENST00000637651 ZNF469Q96JG9 3925 aaPredicted RBP4.92□□□□□ -1.62
EPB41L3-236ENST00000637651 MT1FP04733 61 aa4.9□□□□□ -1.63
EPB41L3-236ENST00000637651 MT1GP13640 62 aa4.88□□□□□ -1.63
EPB41L3-236ENST00000637651 LCE2CQ5TA81 110 aa4.88□□□□□ -1.63
EPB41L3-236ENST00000637651 SPRR2GQ9BYE4 73 aa4.83□□□□□ -1.64
EPB41L3-236ENST00000637651 LCE2DQ5TA82 110 aaPredicted RBP4.82□□□□□ -1.64
EPB41L3-236ENST00000637651 CSMD3Q7Z407 3707 aa4.8□□□□□ -1.64
EPB41L3-236ENST00000637651 DNAH10Q8IVF4 4471 aa4.76□□□□□ -1.65
EPB41L3-236ENST00000637651 PLECQ15149 4684 aaKnown RBP4.76□□□□□ -1.65
EPB41L3-236ENST00000637651 DNAH8Q96JB1 4490 aa4.74□□□□□ -1.65
EPB41L3-236ENST00000637651 DNAH11Q96DT5 4516 aa4.74□□□□□ -1.65
EPB41L3-236ENST00000637651 MT4P47944 62 aa4.72□□□□□ -1.65
EPB41L3-236ENST00000637651 DNAH2Q9P225 4427 aa4.72□□□□□ -1.65
EPB41L3-236ENST00000637651 DNAH17Q9UFH2 4485 aa4.72□□□□□ -1.65
EPB41L3-236ENST00000637651 DNAH1Q9P2D7 4330 aa4.72□□□□□ -1.65
EPB41L3-236ENST00000637651 LRP1BQ9NZR2 4599 aa4.7□□□□□ -1.66
EPB41L3-236ENST00000637651 LCE3EQ5T5B0 92 aa4.68□□□□□ -1.66
EPB41L3-236ENST00000637651 LCE3DQ9BYE3 92 aa4.67□□□□□ -1.66
EPB41L3-236ENST00000637651 DNAH9Q9NYC9 4486 aa4.67□□□□□ -1.66
EPB41L3-236ENST00000637651 VPS13DQ5THJ4 4388 aa4.66□□□□□ -1.66
EPB41L3-236ENST00000637651 DNAH5Q8TE73 4624 aa4.65□□□□□ -1.67
EPB41L3-236ENST00000637651 KRTAP19-4Q3LI73 84 aa4.6□□□□□ -1.67
EPB41L3-236ENST00000637651 LCE1BQ5T7P3 118 aa4.6□□□□□ -1.67
EPB41L3-236ENST00000637651 KRTAP19-1Q8IUB9 90 aa4.56□□□□□ -1.68
EPB41L3-236ENST00000637651 STARD9Q9P2P6 4700 aa4.52□□□□□ -1.69
EPB41L3-236ENST00000637651 FAT1Q14517 4588 aa4.51□□□□□ -1.69
EPB41L3-236ENST00000637651 LCE1DQ5T752 114 aa4.5□□□□□ -1.69
EPB41L3-236ENST00000637651 DYNC1H1Q14204 4646 aaKnown RBP4.49□□□□□ -1.69
EPB41L3-236ENST00000637651 SACSQ9NZJ4 4579 aa4.47□□□□□ -1.69
EPB41L3-236ENST00000637651 KRTAP4-8A0A0G2JLE6 195 aa4.45□□□□□ -1.7
EPB41L3-236ENST00000637651 KRTAP4-8Q9BYQ9 185 aa4.45□□□□□ -1.7
EPB41L3-236ENST00000637651 DNHD1Q96M86 4753 aa4.4□□□□□ -1.7
EPB41L3-236ENST00000637651 MYCBP2O75592 4640 aa4.4□□□□□ -1.71
EPB41L3-236ENST00000637651 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
EPB41L3-236ENST00000637651 DNAH3Q8TD57 4116 aa4.38□□□□□ -1.71
EPB41L3-236ENST00000637651 MT1XP80297 61 aa4.36□□□□□ -1.71
EPB41L3-236ENST00000637651 DYNC2H1Q8NCM8 4307 aaKnown RBP4.33□□□□□ -1.72
EPB41L3-236ENST00000637651 APOBP04114 4563 aaKnown RBP4.33□□□□□ -1.72
EPB41L3-236ENST00000637651 FAT2Q9NYQ8 4349 aa4.33□□□□□ -1.72
EPB41L3-236ENST00000637651 KIAA1109Q2LD37 5005 aa4.32□□□□□ -1.72
EPB41L3-236ENST00000637651 ANK2Q01484 3957 aa4.31□□□□□ -1.72
EPB41L3-236ENST00000637651 KRTAP19-8Q3LI54 63 aa4.31□□□□□ -1.72
EPB41L3-236ENST00000637651 MT3P25713 68 aa4.29□□□□□ -1.72
EPB41L3-236ENST00000637651 RYR1P21817 5038 aa4.29□□□□□ -1.72
EPB41L3-236ENST00000637651 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
EPB41L3-236ENST00000637651 PRM1P04553 51 aa4.28□□□□□ -1.72
EPB41L3-236ENST00000637651 LYSTQ99698 3801 aa4.25□□□□□ -1.73
EPB41L3-236ENST00000637651 HECTD4Q9Y4D8 3996 aa4.24□□□□□ -1.73
EPB41L3-236ENST00000637651 LCE1CQ5T751 118 aa4.23□□□□□ -1.73
EPB41L3-236ENST00000637651 LCE1EQ5T753 118 aa4.23□□□□□ -1.73
EPB41L3-236ENST00000637651 LCE1FQ5T754 118 aa4.23□□□□□ -1.73
EPB41L3-236ENST00000637651 LCE1AQ5T7P2 110 aa4.23□□□□□ -1.73
EPB41L3-236ENST00000637651 DNAH7Q8WXX0 4024 aa4.23□□□□□ -1.73
EPB41L3-236ENST00000637651 KRTAP20-1Q3LI63 56 aa4.23□□□□□ -1.73
EPB41L3-236ENST00000637651 VPS13BQ7Z7G8 4022 aa4.23□□□□□ -1.73
EPB41L3-236ENST00000637651 PRKDCP78527 4128 aaKnown RBP4.23□□□□□ -1.73
EPB41L3-236ENST00000637651 KMT2AQ03164 3969 aa4.21□□□□□ -1.74
EPB41L3-236ENST00000637651 KRTAP9-2Q9BYQ4 174 aa4.2□□□□□ -1.74
EPB41L3-236ENST00000637651 FAT3Q8TDW7 4589 aa4.19□□□□□ -1.74
EPB41L3-236ENST00000637651 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
EPB41L3-236ENST00000637651 CMYA5Q8N3K9 4069 aa4.19□□□□□ -1.74
EPB41L3-236ENST00000637651 MT1BP07438 61 aa4.19□□□□□ -1.74
EPB41L3-236ENST00000637651 LRP1Q07954 4544 aaKnown RBP4.18□□□□□ -1.74
EPB41L3-236ENST00000637651 FRAS1Q86XX4 4008 aa4.17□□□□□ -1.74
EPB41L3-236ENST00000637651 DNAH6Q9C0G6 4158 aa4.16□□□□□ -1.74
EPB41L3-236ENST00000637651 KRTAP17-1Q9BYP8 105 aa4.15□□□□□ -1.74
EPB41L3-236ENST00000637651 RYR2Q92736 4967 aa4.12□□□□□ -1.75
EPB41L3-236ENST00000637651 LRP2P98164 4655 aa4.12□□□□□ -1.75
EPB41L3-236ENST00000637651 KRTAP19-6Q3LI70 58 aa4.11□□□□□ -1.75
EPB41L3-236ENST00000637651 KRTAP9-8Q9BYQ0 159 aa4.1□□□□□ -1.75
EPB41L3-236ENST00000637651 KRTAP9-6A0A140TA67 174 aa4.1□□□□□ -1.75
EPB41L3-236ENST00000637651 LOC100996750A0A140TA64 210 aa4.07□□□□□ -1.76
EPB41L3-236ENST00000637651 MT1LQ93083 61 aa4.07□□□□□ -1.76
EPB41L3-236ENST00000637651 KRTAP9-3Q9BYQ3 159 aa4.07□□□□□ -1.76
EPB41L3-236ENST00000637651 HYDINQ4G0P3 5121 aa4.06□□□□□ -1.76
EPB41L3-236ENST00000637651 RYR3Q15413 4870 aa4.05□□□□□ -1.76
EPB41L3-236ENST00000637651 MT1EP04732 61 aa4.01□□□□□ -1.77
EPB41L3-236ENST00000637651 MT1MQ8N339 61 aa3.99□□□□□ -1.77
EPB41L3-236ENST00000637651 KMT2CQ8NEZ4 4911 aaKnown RBP3.97□□□□□ -1.77
EPB41L3-236ENST00000637651 PKHD1L1Q86WI1 4243 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms