RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 SVEP1Q4LDE5 3571 aa6.59□□□□□ -1.35
CLN5-208ENST00000636183 BSNQ9UPA5 3926 aa6.59□□□□□ -1.36
CLN5-208ENST00000636183 MT1HP80294 61 aa6.55□□□□□ -1.36
CLN5-208ENST00000636183 CUBNO60494 3623 aa6.47□□□□□ -1.37
CLN5-208ENST00000636183 SPRR2EP22531 72 aa6.45□□□□□ -1.38
CLN5-208ENST00000636183 SPRR2BP35325 72 aa6.45□□□□□ -1.38
CLN5-208ENST00000636183 SPRR2AP35326 72 aa6.45□□□□□ -1.38
CLN5-208ENST00000636183 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
CLN5-208ENST00000636183 KRTAP4-1Q9BYQ7 146 aa6.41□□□□□ -1.38
CLN5-208ENST00000636183 VPS13CQ709C8 3753 aa6.4□□□□□ -1.38
CLN5-208ENST00000636183 MT2AP02795 61 aa6.35□□□□□ -1.39
CLN5-208ENST00000636183 CSMD3Q7Z407 3707 aa6.29□□□□□ -1.4
CLN5-208ENST00000636183 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
CLN5-208ENST00000636183 SPRR2DP22532 72 aa6.23□□□□□ -1.41
CLN5-208ENST00000636183 DNAH1Q9P2D7 4330 aa6.22□□□□□ -1.41
CLN5-208ENST00000636183 MT1FP04733 61 aa6.22□□□□□ -1.41
CLN5-208ENST00000636183 DNAH9Q9NYC9 4486 aa6.14□□□□□ -1.43
CLN5-208ENST00000636183 SPRR2GQ9BYE4 73 aa6.1□□□□□ -1.43
CLN5-208ENST00000636183 DNAH5Q8TE73 4624 aa6.09□□□□□ -1.44
CLN5-208ENST00000636183 LCE2BO14633 110 aa6.06□□□□□ -1.44
CLN5-208ENST00000636183 LCE3BQ5TA77 95 aa6.04□□□□□ -1.44
CLN5-208ENST00000636183 DNAH2Q9P225 4427 aa6.04□□□□□ -1.44
CLN5-208ENST00000636183 ZNF469Q96JG9 3925 aaPredicted RBP6.04□□□□□ -1.44
CLN5-208ENST00000636183 LCE3CQ5T5A8 94 aa6.03□□□□□ -1.44
CLN5-208ENST00000636183 AKAP9Q99996 3911 aa5.98□□□□□ -1.45
CLN5-208ENST00000636183 PLECQ15149 4684 aaKnown RBP5.98□□□□□ -1.45
CLN5-208ENST00000636183 DNAH10Q8IVF4 4471 aa5.97□□□□□ -1.45
CLN5-208ENST00000636183 KRTAP12-4P60329 112 aa5.95□□□□□ -1.46
CLN5-208ENST00000636183 MT1GP13640 62 aa5.86□□□□□ -1.47
CLN5-208ENST00000636183 FAT2Q9NYQ8 4349 aa5.85□□□□□ -1.47
CLN5-208ENST00000636183 DNAH11Q96DT5 4516 aa5.85□□□□□ -1.47
CLN5-208ENST00000636183 DNAH17Q9UFH2 4485 aa5.81□□□□□ -1.48
CLN5-208ENST00000636183 SPRR5A0A1B0GTR4 108 aa5.81□□□□□ -1.48
CLN5-208ENST00000636183 FAT1Q14517 4588 aa5.8□□□□□ -1.48
CLN5-208ENST00000636183 LCE2CQ5TA81 110 aa5.79□□□□□ -1.48
CLN5-208ENST00000636183 LCE2DQ5TA82 110 aaPredicted RBP5.75□□□□□ -1.49
CLN5-208ENST00000636183 KRTAP19-1Q8IUB9 90 aa5.72□□□□□ -1.49
CLN5-208ENST00000636183 LRP1BQ9NZR2 4599 aa5.72□□□□□ -1.49
CLN5-208ENST00000636183 KRTAP17-1Q9BYP8 105 aa5.69□□□□□ -1.5
CLN5-208ENST00000636183 VPS13BQ7Z7G8 4022 aa5.68□□□□□ -1.5
CLN5-208ENST00000636183 MT4P47944 62 aa5.66□□□□□ -1.5
CLN5-208ENST00000636183 DNAH3Q8TD57 4116 aa5.64□□□□□ -1.51
CLN5-208ENST00000636183 DNAH8Q96JB1 4490 aa5.62□□□□□ -1.51
CLN5-208ENST00000636183 DYNC1H1Q14204 4646 aaKnown RBP5.62□□□□□ -1.51
CLN5-208ENST00000636183 KRTAP4-8A0A0G2JLE6 195 aa5.61□□□□□ -1.51
CLN5-208ENST00000636183 KRTAP4-8Q9BYQ9 185 aa5.61□□□□□ -1.51
CLN5-208ENST00000636183 VPS13DQ5THJ4 4388 aa5.6□□□□□ -1.51
CLN5-208ENST00000636183 SACSQ9NZJ4 4579 aa5.6□□□□□ -1.51
CLN5-208ENST00000636183 RYR1P21817 5038 aa5.59□□□□□ -1.51
CLN5-208ENST00000636183 DYNC2H1Q8NCM8 4307 aaKnown RBP5.59□□□□□ -1.51
CLN5-208ENST00000636183 DNHD1Q96M86 4753 aa5.58□□□□□ -1.52
CLN5-208ENST00000636183 ANK2Q01484 3957 aa5.58□□□□□ -1.52
CLN5-208ENST00000636183 KRTAP19-4Q3LI73 84 aa5.58□□□□□ -1.52
CLN5-208ENST00000636183 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
CLN5-208ENST00000636183 MT1XP80297 61 aa5.54□□□□□ -1.52
CLN5-208ENST00000636183 STARD9Q9P2P6 4700 aa5.52□□□□□ -1.53
CLN5-208ENST00000636183 KMT2AQ03164 3969 aa5.5□□□□□ -1.53
CLN5-208ENST00000636183 DNAH7Q8WXX0 4024 aa5.48□□□□□ -1.53
CLN5-208ENST00000636183 PRKDCP78527 4128 aaKnown RBP5.47□□□□□ -1.53
CLN5-208ENST00000636183 LCE3DQ9BYE3 92 aa5.46□□□□□ -1.54
CLN5-208ENST00000636183 MT1BP07438 61 aa5.44□□□□□ -1.54
CLN5-208ENST00000636183 KRTAP9-2Q9BYQ4 174 aa5.44□□□□□ -1.54
CLN5-208ENST00000636183 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
CLN5-208ENST00000636183 FAT3Q8TDW7 4589 aa5.42□□□□□ -1.54
CLN5-208ENST00000636183 APOBP04114 4563 aaKnown RBP5.41□□□□□ -1.54
CLN5-208ENST00000636183 LCE1BQ5T7P3 118 aa5.39□□□□□ -1.55
CLN5-208ENST00000636183 LYSTQ99698 3801 aa5.38□□□□□ -1.55
CLN5-208ENST00000636183 LRP1Q07954 4544 aaKnown RBP5.36□□□□□ -1.55
CLN5-208ENST00000636183 KRTAP9-3Q9BYQ3 159 aa5.34□□□□□ -1.55
CLN5-208ENST00000636183 FRAS1Q86XX4 4008 aa5.32□□□□□ -1.56
CLN5-208ENST00000636183 LCE3EQ5T5B0 92 aa5.32□□□□□ -1.56
CLN5-208ENST00000636183 RYR3Q15413 4870 aa5.32□□□□□ -1.56
CLN5-208ENST00000636183 LCE1DQ5T752 114 aa5.3□□□□□ -1.56
CLN5-208ENST00000636183 KRTAP19-3Q7Z4W3 81 aa5.3□□□□□ -1.56
CLN5-208ENST00000636183 KRTAP9-6A0A140TA67 174 aa5.27□□□□□ -1.57
CLN5-208ENST00000636183 CMYA5Q8N3K9 4069 aa5.25□□□□□ -1.57
CLN5-208ENST00000636183 DNAH6Q9C0G6 4158 aa5.24□□□□□ -1.57
CLN5-208ENST00000636183 KRTAP4-7Q9BYR0 210 aa5.23□□□□□ -1.57
CLN5-208ENST00000636183 PKHD1L1Q86WI1 4243 aa5.21□□□□□ -1.58
CLN5-208ENST00000636183 KRTAP20-1Q3LI63 56 aa5.17□□□□□ -1.58
CLN5-208ENST00000636183 LCE5AQ5TCM9 118 aa5.12□□□□□ -1.59
CLN5-208ENST00000636183 MT3P25713 68 aa5.11□□□□□ -1.59
CLN5-208ENST00000636183 MT1LQ93083 61 aa5.09□□□□□ -1.6
CLN5-208ENST00000636183 PKD1P98161 4303 aa5.06□□□□□ -1.6
CLN5-208ENST00000636183 KRTAP19-6Q3LI70 58 aa5.06□□□□□ -1.6
CLN5-208ENST00000636183 MT1EP04732 61 aa5.05□□□□□ -1.6
CLN5-208ENST00000636183 MYCBP2O75592 4640 aa5.05□□□□□ -1.6
CLN5-208ENST00000636183 HSPG2P98160 4391 aa5.03□□□□□ -1.6
CLN5-208ENST00000636183 LPAP08519 4548 aa5.03□□□□□ -1.6
CLN5-208ENST00000636183 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
CLN5-208ENST00000636183 HERC1Q15751 4861 aa4.99□□□□□ -1.61
CLN5-208ENST00000636183 KRTAP9-7A8MTY7 169 aa4.98□□□□□ -1.61
CLN5-208ENST00000636183 MT1MQ8N339 61 aa4.98□□□□□ -1.61
CLN5-208ENST00000636183 KRTAP4-3Q9BYR4 195 aa4.96□□□□□ -1.62
CLN5-208ENST00000636183 PKHD1P08F94 4074 aa4.94□□□□□ -1.62
CLN5-208ENST00000636183 PRM1P04553 51 aa4.91□□□□□ -1.62
CLN5-208ENST00000636183 HECTD4Q9Y4D8 3996 aa4.89□□□□□ -1.63
CLN5-208ENST00000636183 LCE1CQ5T751 118 aa4.85□□□□□ -1.63
CLN5-208ENST00000636183 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
CLN5-208ENST00000636183 LCE1FQ5T754 118 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms