RNA–Protein interactions for RNA: ENST00000635822.2

TCF4-276, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 7,805 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-276ENST00000635822 KRTAP21-3Q3LHN1 58 aa5□□□□□ -1.61
TCF4-276ENST00000635822 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
TCF4-276ENST00000635822 DNAH2Q9P225 4427 aa4.99□□□□□ -1.61
TCF4-276ENST00000635822 KRTAP23-1A1A580 65 aa4.93□□□□□ -1.62
TCF4-276ENST00000635822 DNAH1Q9P2D7 4330 aa4.93□□□□□ -1.62
TCF4-276ENST00000635822 MT1HL1P0DM35 61 aa4.93□□□□□ -1.62
TCF4-276ENST00000635822 ANK2Q01484 3957 aa4.91□□□□□ -1.62
TCF4-276ENST00000635822 DNAH8Q96JB1 4490 aa4.87□□□□□ -1.63
TCF4-276ENST00000635822 KRTAP10-4P60372 401 aaPredicted RBP4.86□□□□□ -1.63
TCF4-276ENST00000635822 LYSTQ99698 3801 aa4.84□□□□□ -1.64
TCF4-276ENST00000635822 KMT2AQ03164 3969 aa4.81□□□□□ -1.64
TCF4-276ENST00000635822 DNAH9Q9NYC9 4486 aa4.8□□□□□ -1.64
TCF4-276ENST00000635822 VPS13BQ7Z7G8 4022 aa4.78□□□□□ -1.64
TCF4-276ENST00000635822 DNAH3Q8TD57 4116 aa4.78□□□□□ -1.64
TCF4-276ENST00000635822 DNAH11Q96DT5 4516 aa4.78□□□□□ -1.64
TCF4-276ENST00000635822 PLECQ15149 4684 aaKnown RBP4.77□□□□□ -1.65
TCF4-276ENST00000635822 KRTAP10-5P60370 271 aa4.76□□□□□ -1.65
TCF4-276ENST00000635822 CMYA5Q8N3K9 4069 aa4.75□□□□□ -1.65
TCF4-276ENST00000635822 KRTAP4-5Q9BYR2 181 aa4.69□□□□□ -1.66
TCF4-276ENST00000635822 DNAH17Q9UFH2 4485 aa4.64□□□□□ -1.67
TCF4-276ENST00000635822 DNAH5Q8TE73 4624 aa4.62□□□□□ -1.67
TCF4-276ENST00000635822 DNAH7Q8WXX0 4024 aa4.6□□□□□ -1.67
TCF4-276ENST00000635822 VPS13DQ5THJ4 4388 aa4.6□□□□□ -1.67
TCF4-276ENST00000635822 STARD9Q9P2P6 4700 aa4.59□□□□□ -1.67
TCF4-276ENST00000635822 HECTD4Q9Y4D8 3996 aa4.59□□□□□ -1.68
TCF4-276ENST00000635822 DNAH6Q9C0G6 4158 aa4.56□□□□□ -1.68
TCF4-276ENST00000635822 KRTAP4-1Q9BYQ7 146 aa4.56□□□□□ -1.68
TCF4-276ENST00000635822 FAT1Q14517 4588 aa4.53□□□□□ -1.68
TCF4-276ENST00000635822 APOBP04114 4563 aaKnown RBP4.51□□□□□ -1.69
TCF4-276ENST00000635822 LRP1BQ9NZR2 4599 aa4.5□□□□□ -1.69
TCF4-276ENST00000635822 DYNC2H1Q8NCM8 4307 aaKnown RBP4.46□□□□□ -1.7
TCF4-276ENST00000635822 FAT2Q9NYQ8 4349 aa4.44□□□□□ -1.7
TCF4-276ENST00000635822 MYCBP2O75592 4640 aa4.44□□□□□ -1.7
TCF4-276ENST00000635822 PRKDCP78527 4128 aaKnown RBP4.42□□□□□ -1.7
TCF4-276ENST00000635822 LCE3CQ5T5A8 94 aa4.42□□□□□ -1.7
TCF4-276ENST00000635822 KRTAP19-5Q3LI72 72 aa4.41□□□□□ -1.7
TCF4-276ENST00000635822 SPRR2GQ9BYE4 73 aa4.4□□□□□ -1.71
TCF4-276ENST00000635822 KRTAP8-1Q8IUC2 63 aa4.37□□□□□ -1.71
TCF4-276ENST00000635822 SACSQ9NZJ4 4579 aa4.35□□□□□ -1.71
TCF4-276ENST00000635822 DYNC1H1Q14204 4646 aaKnown RBP4.33□□□□□ -1.72
TCF4-276ENST00000635822 LRP1Q07954 4544 aaKnown RBP4.31□□□□□ -1.72
TCF4-276ENST00000635822 FAT3Q8TDW7 4589 aa4.31□□□□□ -1.72
TCF4-276ENST00000635822 MT2AP02795 61 aa4.29□□□□□ -1.72
TCF4-276ENST00000635822 SPRR5A0A1B0GTR4 108 aa4.29□□□□□ -1.72
TCF4-276ENST00000635822 MT1HP80294 61 aa4.29□□□□□ -1.72
TCF4-276ENST00000635822 MT1FP04733 61 aa4.26□□□□□ -1.73
TCF4-276ENST00000635822 KRTAP10-7P60409 375 aaPredicted RBP4.23□□□□□ -1.73
TCF4-276ENST00000635822 KRTAP12-4P60329 112 aa4.21□□□□□ -1.74
TCF4-276ENST00000635822 PKHD1P08F94 4074 aa4.17□□□□□ -1.74
TCF4-276ENST00000635822 KRTAP19-1Q8IUB9 90 aa4.14□□□□□ -1.75
TCF4-276ENST00000635822 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
TCF4-276ENST00000635822 LRP2P98164 4655 aa4.08□□□□□ -1.76
TCF4-276ENST00000635822 DNHD1Q96M86 4753 aa4.08□□□□□ -1.76
TCF4-276ENST00000635822 RYR1P21817 5038 aa4.07□□□□□ -1.76
TCF4-276ENST00000635822 PKD1P98161 4303 aa4.07□□□□□ -1.76
TCF4-276ENST00000635822 MT1XP80297 61 aa4.07□□□□□ -1.76
TCF4-276ENST00000635822 LPAP08519 4548 aa4.06□□□□□ -1.76
TCF4-276ENST00000635822 HSPG2P98160 4391 aa4.05□□□□□ -1.76
TCF4-276ENST00000635822 SPRR2FQ96RM1 72 aa4.02□□□□□ -1.77
TCF4-276ENST00000635822 MT1GP13640 62 aa4.02□□□□□ -1.77
TCF4-276ENST00000635822 KRTAP17-1Q9BYP8 105 aa4□□□□□ -1.77
TCF4-276ENST00000635822 FLGP20930 4061 aaPredicted RBP4□□□□□ -1.77
TCF4-276ENST00000635822 KRTAP4-8A0A0G2JLE6 195 aa3.98□□□□□ -1.77
TCF4-276ENST00000635822 KRTAP4-8Q9BYQ9 185 aa3.98□□□□□ -1.77
TCF4-276ENST00000635822 KRTAP19-8Q3LI54 63 aa3.98□□□□□ -1.77
TCF4-276ENST00000635822 PKHD1L1Q86WI1 4243 aa3.96□□□□□ -1.78
TCF4-276ENST00000635822 MT1BP07438 61 aa3.92□□□□□ -1.78
TCF4-276ENST00000635822 KRTAP4-7Q9BYR0 210 aa3.92□□□□□ -1.78
TCF4-276ENST00000635822 TNXBP22105 4242 aa3.9□□□□□ -1.79
TCF4-276ENST00000635822 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
TCF4-276ENST00000635822 HYDINQ4G0P3 5121 aa3.87□□□□□ -1.79
TCF4-276ENST00000635822 LCE3DQ9BYE3 92 aa3.87□□□□□ -1.79
TCF4-276ENST00000635822 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
TCF4-276ENST00000635822 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
TCF4-276ENST00000635822 KMT2CQ8NEZ4 4911 aaKnown RBP3.77□□□□□ -1.81
TCF4-276ENST00000635822 RYR3Q15413 4870 aa3.77□□□□□ -1.81
TCF4-276ENST00000635822 PRM1P04553 51 aa3.76□□□□□ -1.81
TCF4-276ENST00000635822 LCE2CQ5TA81 110 aa3.72□□□□□ -1.81
TCF4-276ENST00000635822 LOC100996750A0A140TA64 210 aa3.69□□□□□ -1.82
TCF4-276ENST00000635822 KIAA1109Q2LD37 5005 aa3.69□□□□□ -1.82
TCF4-276ENST00000635822 KRTAP9-3Q9BYQ3 159 aa3.68□□□□□ -1.82
TCF4-276ENST00000635822 MT1LQ93083 61 aa3.67□□□□□ -1.82
TCF4-276ENST00000635822 KRTAP19-2Q3LHN2 52 aa3.65□□□□□ -1.82
TCF4-276ENST00000635822 SPRR2EP22531 72 aa3.64□□□□□ -1.83
TCF4-276ENST00000635822 SPRR2BP35325 72 aa3.64□□□□□ -1.83
TCF4-276ENST00000635822 SPRR2AP35326 72 aa3.64□□□□□ -1.83
TCF4-276ENST00000635822 MT1EP04732 61 aa3.59□□□□□ -1.83
TCF4-276ENST00000635822 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
TCF4-276ENST00000635822 MUC17Q685J3 4493 aa3.57□□□□□ -1.84
TCF4-276ENST00000635822 RYR2Q92736 4967 aa3.56□□□□□ -1.84
TCF4-276ENST00000635822 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
TCF4-276ENST00000635822 KRTAP4-9Q9BYQ8 210 aa3.55□□□□□ -1.84
TCF4-276ENST00000635822 LCE2BO14633 110 aa3.55□□□□□ -1.84
TCF4-276ENST00000635822 HERC2O95714 4834 aa3.54□□□□□ -1.84
TCF4-276ENST00000635822 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
TCF4-276ENST00000635822 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
TCF4-276ENST00000635822 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
TCF4-276ENST00000635822 SYNE1Q8NF91 8797 aaKnown RBP3.51□□□□□ -1.85
TCF4-276ENST00000635822 SPRR2DP22532 72 aa3.48□□□□□ -1.85
TCF4-276ENST00000635822 MT1MQ8N339 61 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms