RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 PRCDQ00LT1 54 aa2.35□□□□□ -2.03
SDCBP-213ENST00000630925 CNFNQ9BYD5 112 aa2.35□□□□□ -2.03
SDCBP-213ENST00000630925 SRRM2Q9UQ35 2752 aaKnown RBP2.35□□□□□ -2.03
SDCBP-213ENST00000630925 FSIP2Q5CZC0 6907 aa2.35□□□□□ -2.03
SDCBP-213ENST00000630925 MT3P25713 68 aa2.34□□□□□ -2.03
SDCBP-213ENST00000630925 DNAH6Q9C0G6 4158 aa2.34□□□□□ -2.04
SDCBP-213ENST00000630925 LINC00158P58513 81 aa2.32□□□□□ -2.04
SDCBP-213ENST00000630925 DEFB136Q30KP8 78 aa2.32□□□□□ -2.04
SDCBP-213ENST00000630925 CRCT1Q9UGL9 99 aa2.32□□□□□ -2.04
SDCBP-213ENST00000630925 K7EIM0 57 aa2.32□□□□□ -2.04
SDCBP-213ENST00000630925 I3L2K1 104 aa2.31□□□□□ -2.04
SDCBP-213ENST00000630925 SMIM2Q9BVW6 85 aa2.31□□□□□ -2.04
SDCBP-213ENST00000630925 CDKN2A-AS1Q9UH64 79 aa2.31□□□□□ -2.04
SDCBP-213ENST00000630925 DNAH5Q8TE73 4624 aa2.31□□□□□ -2.04
SDCBP-213ENST00000630925 LRP2P98164 4655 aa2.3□□□□□ -2.04
SDCBP-213ENST00000630925 RPL37P61927 97 aaKnown RBP2.3□□□□□ -2.04
SDCBP-213ENST00000630925 KRTAP13-4Q3LI77 160 aa2.3□□□□□ -2.04
SDCBP-213ENST00000630925 UNQ6190/PRO20217Q6UXQ8 127 aa2.3□□□□□ -2.04
SDCBP-213ENST00000630925 CRIPTQ9P021 101 aa2.3□□□□□ -2.04
SDCBP-213ENST00000630925 DEFB1P60022 68 aa2.28□□□□□ -2.04
SDCBP-213ENST00000630925 SPINK13Q1W4C9 94 aa2.28□□□□□ -2.04
SDCBP-213ENST00000630925 Q8IZM0 81 aa2.28□□□□□ -2.04
SDCBP-213ENST00000630925 FLG2Q5D862 2391 aaPredicted RBP2.28□□□□□ -2.05
SDCBP-213ENST00000630925 KLK9Q2XQG4 91 aa2.27□□□□□ -2.05
SDCBP-213ENST00000630925 LINC00308Q8TCZ7 52 aa2.27□□□□□ -2.05
SDCBP-213ENST00000630925 KRTAP4-3Q9BYR4 195 aa2.27□□□□□ -2.05
SDCBP-213ENST00000630925 LINC00575Q6W349 94 aa2.27□□□□□ -2.05
SDCBP-213ENST00000630925 USMG5Q96IX5 58 aa2.27□□□□□ -2.05
SDCBP-213ENST00000630925 SORL1Q92673 2214 aa2.26□□□□□ -2.05
SDCBP-213ENST00000630925 H3BUA1 57 aa2.26□□□□□ -2.05
SDCBP-213ENST00000630925 RHPN1-AS1Q9BWJ2 59 aa2.26□□□□□ -2.05
SDCBP-213ENST00000630925 VPS13BQ7Z7G8 4022 aa2.26□□□□□ -2.05
SDCBP-213ENST00000630925 KRTAP10-6P60371 365 aaPredicted RBP2.26□□□□□ -2.05
SDCBP-213ENST00000630925 KRTAP10-1P60331 282 aa2.24□□□□□ -2.05
SDCBP-213ENST00000630925 UBE2DNLQ8IWF7 75 aa2.24□□□□□ -2.05
SDCBP-213ENST00000630925 PKHD1L1Q86WI1 4243 aa2.24□□□□□ -2.05
SDCBP-213ENST00000630925 DEFB131AP59861 70 aa2.23□□□□□ -2.05
SDCBP-213ENST00000630925 RPL39LQ96EH5 51 aaKnown RBP2.23□□□□□ -2.05
SDCBP-213ENST00000630925 KRTAP1-5Q9BYS1 174 aa2.23□□□□□ -2.05
SDCBP-213ENST00000630925 LRP1Q07954 4544 aaKnown RBP2.22□□□□□ -2.05
SDCBP-213ENST00000630925 NDUFA1O15239 70 aa2.22□□□□□ -2.05
SDCBP-213ENST00000630925 HTN1P15515 57 aa2.22□□□□□ -2.05
SDCBP-213ENST00000630925 POLR2KP53803 58 aaKnown RBP2.22□□□□□ -2.05
SDCBP-213ENST00000630925 RPL39P62891 51 aaKnown RBP2.22□□□□□ -2.05
SDCBP-213ENST00000630925 LELP1Q5T871 98 aa2.22□□□□□ -2.05
SDCBP-213ENST00000630925 LCE1EQ5T753 118 aa2.22□□□□□ -2.05
SDCBP-213ENST00000630925 MRPL34Q9BQ48 92 aaKnown RBP2.2□□□□□ -2.06
SDCBP-213ENST00000630925 FAT3Q8TDW7 4589 aa2.2□□□□□ -2.06
SDCBP-213ENST00000630925 K7EQZ3 153 aa2.19□□□□□ -2.06
SDCBP-213ENST00000630925 DEFB4AO15263 64 aa2.19□□□□□ -2.06
SDCBP-213ENST00000630925 SPRR5A0A1B0GTR4 108 aa2.18□□□□□ -2.06
SDCBP-213ENST00000630925 H0YAA0 97 aa2.18□□□□□ -2.06
SDCBP-213ENST00000630925 Q5VSD8 79 aa2.18□□□□□ -2.06
SDCBP-213ENST00000630925 DEFB104AQ8WTQ1 72 aa2.18□□□□□ -2.06
SDCBP-213ENST00000630925 DEFB135Q30KP9 77 aa2.18□□□□□ -2.06
SDCBP-213ENST00000630925 PCOTHQ58A44 107 aa2.17□□□□□ -2.06
SDCBP-213ENST00000630925 COX6B2Q6YFQ2 88 aa2.17□□□□□ -2.06
SDCBP-213ENST00000630925 TP53AIP1Q9HCN2 124 aa2.16□□□□□ -2.06
SDCBP-213ENST00000630925 NOP10Q9NPE3 64 aaKnown RBP2.16□□□□□ -2.06
SDCBP-213ENST00000630925 TNXBP22105 4242 aa2.15□□□□□ -2.06
SDCBP-213ENST00000630925 DEFB130BP0DP73 79 aa2.15□□□□□ -2.07
SDCBP-213ENST00000630925 DEFB130AP0DP74 79 aa2.15□□□□□ -2.07
SDCBP-213ENST00000630925 HTN3P15516 51 aa2.15□□□□□ -2.07
SDCBP-213ENST00000630925 LCE3CQ5T5A8 94 aa2.14□□□□□ -2.07
SDCBP-213ENST00000630925 C10orf95Q9H7T3 257 aa2.14□□□□□ -2.07
SDCBP-213ENST00000630925 A0A096LPF7 62 aa2.13□□□□□ -2.07
SDCBP-213ENST00000630925 A8MTW9 85 aa2.13□□□□□ -2.07
SDCBP-213ENST00000630925 COX6A2Q02221 97 aa2.12□□□□□ -2.07
SDCBP-213ENST00000630925 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
SDCBP-213ENST00000630925 M0QY20 66 aa2.11□□□□□ -2.07
SDCBP-213ENST00000630925 C6orf48Q9UBA6 75 aa2.11□□□□□ -2.07
SDCBP-213ENST00000630925 Q6ZSA8 131 aa2.1□□□□□ -2.07
SDCBP-213ENST00000630925 SPART-AS1P0CW21 52 aa2.1□□□□□ -2.07
SDCBP-213ENST00000630925 LPAP08519 4548 aa2.09□□□□□ -2.07
SDCBP-213ENST00000630925 SMR3BP02814 79 aaPredicted RBP2.08□□□□□ -2.08
SDCBP-213ENST00000630925 APLNQ9ULZ1 77 aa2.08□□□□□ -2.08
SDCBP-213ENST00000630925 KRTAP12-1P59990 96 aa2.08□□□□□ -2.08
SDCBP-213ENST00000630925 KRTAP10-12P60413 245 aa2.08□□□□□ -2.08
SDCBP-213ENST00000630925 SSPOA2VEC9 5147 aa2.07□□□□□ -2.08
SDCBP-213ENST00000630925 CLPSL2Q6UWE3 100 aa2.07□□□□□ -2.08
SDCBP-213ENST00000630925 PRO0255Q9UI72 69 aa2.07□□□□□ -2.08
SDCBP-213ENST00000630925 KRTAP13-3Q3SY46 172 aa2.06□□□□□ -2.08
SDCBP-213ENST00000630925 SYNE2Q8WXH0 6885 aaKnown RBP2.06□□□□□ -2.08
SDCBP-213ENST00000630925 WFDC10BQ8IUB3 73 aa2.05□□□□□ -2.08
SDCBP-213ENST00000630925 DNAH8Q96JB1 4490 aa2.05□□□□□ -2.08
SDCBP-213ENST00000630925 MT1HL1P0DM35 61 aa2.05□□□□□ -2.08
SDCBP-213ENST00000630925 KRTAP10-10P60014 251 aa2.03□□□□□ -2.08
SDCBP-213ENST00000630925 WFDC13Q8IUB5 93 aa2.03□□□□□ -2.08
SDCBP-213ENST00000630925 NEBP20929 6669 aa2.03□□□□□ -2.08
SDCBP-213ENST00000630925 MACF1Q9UPN3 7388 aaKnown RBP2.03□□□□□ -2.08
SDCBP-213ENST00000630925 KRTAP6-3Q3LI67 103 aa2.02□□□□□ -2.09
SDCBP-213ENST00000630925 IGLV5-48A0A075B6I7 105 aa2.02□□□□□ -2.09
SDCBP-213ENST00000630925 H3BNG1 76 aa2.02□□□□□ -2.09
SDCBP-213ENST00000630925 TOMM7Q9P0U1 55 aa2.02□□□□□ -2.09
SDCBP-213ENST00000630925 SPRR1AP35321 89 aa2.01□□□□□ -2.09
SDCBP-213ENST00000630925 KRTAP10-4P60372 401 aaPredicted RBP2.01□□□□□ -2.09
SDCBP-213ENST00000630925 H1FX-AS1Q4G0G2 97 aa2.01□□□□□ -2.09
SDCBP-213ENST00000630925 LINC01556Q5JQF7 62 aa1.98□□□□□ -2.09
SDCBP-213ENST00000630925 LCE3EQ5T5B0 92 aa1.97□□□□□ -2.09
SDCBP-213ENST00000630925 GPR98Q8WXG9 6306 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms