RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 IGKV2D-30A0A075B6S6 120 aa2.38□□□□□ -2.03
PTP4A1-205ENST00000626021 KRTAP16-1A8MUX0 517 aa2.38□□□□□ -2.03
PTP4A1-205ENST00000626021 IGLV7-43P04211 117 aa2.38□□□□□ -2.03
PTP4A1-205ENST00000626021 C1orf134Q5TEV5 83 aa2.38□□□□□ -2.03
PTP4A1-205ENST00000626021 SACSQ9NZJ4 4579 aa2.38□□□□□ -2.03
PTP4A1-205ENST00000626021 ANAPC11Q9NYG5 84 aa2.37□□□□□ -2.03
PTP4A1-205ENST00000626021 CSAG1Q6PB30 78 aa2.37□□□□□ -2.03
PTP4A1-205ENST00000626021 HYDINQ4G0P3 5121 aa2.36□□□□□ -2.03
PTP4A1-205ENST00000626021 CIRBP-AS1Q8TBR5 109 aa2.36□□□□□ -2.03
PTP4A1-205ENST00000626021 LY6G6CO95867 125 aa2.36□□□□□ -2.03
PTP4A1-205ENST00000626021 Q6ZSA8 131 aa2.35□□□□□ -2.03
PTP4A1-205ENST00000626021 KRTAP4-4Q9BYR3 166 aa2.35□□□□□ -2.03
PTP4A1-205ENST00000626021 SRRM2Q9UQ35 2752 aaKnown RBP2.34□□□□□ -2.03
PTP4A1-205ENST00000626021 A8MUU9 505 aa2.34□□□□□ -2.04
PTP4A1-205ENST00000626021 DYNC1H1Q14204 4646 aaKnown RBP2.33□□□□□ -2.04
PTP4A1-205ENST00000626021 KRTAP25-1Q3LHN0 102 aa2.33□□□□□ -2.04
PTP4A1-205ENST00000626021 KRTAP15-1Q3LI76 137 aa2.32□□□□□ -2.04
PTP4A1-205ENST00000626021 KRTAP13-2Q52LG2 175 aa2.32□□□□□ -2.04
PTP4A1-205ENST00000626021 RYR2Q92736 4967 aa2.31□□□□□ -2.04
PTP4A1-205ENST00000626021 LINC00304Q8N9R0 145 aa2.31□□□□□ -2.04
PTP4A1-205ENST00000626021 VPS13BQ7Z7G8 4022 aa2.31□□□□□ -2.04
PTP4A1-205ENST00000626021 PKHD1P08F94 4074 aa2.3□□□□□ -2.04
PTP4A1-205ENST00000626021 H0YAA0 97 aa2.3□□□□□ -2.04
PTP4A1-205ENST00000626021 KRTAP10-1P60331 282 aa2.3□□□□□ -2.04
PTP4A1-205ENST00000626021 APOBP04114 4563 aaKnown RBP2.3□□□□□ -2.04
PTP4A1-205ENST00000626021 LRP1BQ9NZR2 4599 aa2.3□□□□□ -2.04
PTP4A1-205ENST00000626021 ROMO1P60602 79 aa2.29□□□□□ -2.04
PTP4A1-205ENST00000626021 A0A1B0GU33 70 aa2.29□□□□□ -2.04
PTP4A1-205ENST00000626021 RPS29P62273 56 aaKnown RBP2.29□□□□□ -2.04
PTP4A1-205ENST00000626021 H1FX-AS1Q4G0G2 97 aa2.29□□□□□ -2.04
PTP4A1-205ENST00000626021 SPINK1P00995 79 aa2.28□□□□□ -2.04
PTP4A1-205ENST00000626021 KRTAP10-6P60371 365 aaPredicted RBP2.28□□□□□ -2.04
PTP4A1-205ENST00000626021 A0A1B0GVY2 172 aa2.27□□□□□ -2.05
PTP4A1-205ENST00000626021 KRTAP1-4P0C5Y4 121 aa2.27□□□□□ -2.05
PTP4A1-205ENST00000626021 LCE1EQ5T753 118 aa2.27□□□□□ -2.05
PTP4A1-205ENST00000626021 K7ERS5 55 aa2.26□□□□□ -2.05
PTP4A1-205ENST00000626021 TYMSOSQ8TAI1 123 aa2.25□□□□□ -2.05
PTP4A1-205ENST00000626021 C20orf166-AS1Q96NR2 134 aa2.25□□□□□ -2.05
PTP4A1-205ENST00000626021 TNXBP22105 4242 aa2.24□□□□□ -2.05
PTP4A1-205ENST00000626021 KRTAP10-4P60372 401 aaPredicted RBP2.23□□□□□ -2.05
PTP4A1-205ENST00000626021 COX6B2Q6YFQ2 88 aa2.22□□□□□ -2.05
PTP4A1-205ENST00000626021 P0C880 135 aa2.21□□□□□ -2.06
PTP4A1-205ENST00000626021 HSPG2P98160 4391 aa2.21□□□□□ -2.06
PTP4A1-205ENST00000626021 FAT1Q14517 4588 aa2.21□□□□□ -2.06
PTP4A1-205ENST00000626021 RPL37P61927 97 aaKnown RBP2.21□□□□□ -2.06
PTP4A1-205ENST00000626021 KMT2CQ8NEZ4 4911 aaKnown RBP2.2□□□□□ -2.06
PTP4A1-205ENST00000626021 RYR1P21817 5038 aa2.19□□□□□ -2.06
PTP4A1-205ENST00000626021 FAT3Q8TDW7 4589 aa2.19□□□□□ -2.06
PTP4A1-205ENST00000626021 FLG2Q5D862 2391 aaPredicted RBP2.17□□□□□ -2.06
PTP4A1-205ENST00000626021 TPRXLQ17RH7 258 aa2.17□□□□□ -2.06
PTP4A1-205ENST00000626021 CRIPTQ9P021 101 aa2.17□□□□□ -2.06
PTP4A1-205ENST00000626021 RYR3Q15413 4870 aa2.16□□□□□ -2.06
PTP4A1-205ENST00000626021 C9orf92A6NGG3 77 aa2.15□□□□□ -2.06
PTP4A1-205ENST00000626021 SPINT4Q6UDR6 99 aa2.15□□□□□ -2.06
PTP4A1-205ENST00000626021 SMR3BP02814 79 aaPredicted RBP2.15□□□□□ -2.07
PTP4A1-205ENST00000626021 KRTAP13-4Q3LI77 160 aa2.14□□□□□ -2.07
PTP4A1-205ENST00000626021 LRP1Q07954 4544 aaKnown RBP2.13□□□□□ -2.07
PTP4A1-205ENST00000626021 A0A0A0MQY5 61 aa2.13□□□□□ -2.07
PTP4A1-205ENST00000626021 KRTAP10-8P60410 259 aa2.13□□□□□ -2.07
PTP4A1-205ENST00000626021 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
PTP4A1-205ENST00000626021 Q5VSD8 79 aa2.12□□□□□ -2.07
PTP4A1-205ENST00000626021 S4R3F8 94 aa2.11□□□□□ -2.07
PTP4A1-205ENST00000626021 A0A0D9SG42 100 aa2.1□□□□□ -2.07
PTP4A1-205ENST00000626021 C10orf95Q9H7T3 257 aa2.1□□□□□ -2.07
PTP4A1-205ENST00000626021 NDUFAF8A1L188 74 aa2.09□□□□□ -2.07
PTP4A1-205ENST00000626021 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
PTP4A1-205ENST00000626021 MYCBP2O75592 4640 aa2.09□□□□□ -2.08
PTP4A1-205ENST00000626021 KIAA1109Q2LD37 5005 aa2.09□□□□□ -2.08
PTP4A1-205ENST00000626021 MT1HL1P0DM35 61 aa2.08□□□□□ -2.08
PTP4A1-205ENST00000626021 KRTAP12-1P59990 96 aa2.08□□□□□ -2.08
PTP4A1-205ENST00000626021 KRTAP12-2P59991 146 aa2.08□□□□□ -2.08
PTP4A1-205ENST00000626021 M0QZ58 72 aa2.07□□□□□ -2.08
PTP4A1-205ENST00000626021 EPPK1P58107 5090 aaKnown RBP2.07□□□□□ -2.08
PTP4A1-205ENST00000626021 MUC5BQ9HC84 5762 aaPredicted RBP2.06□□□□□ -2.08
PTP4A1-205ENST00000626021 DMBT1Q9UGM3 2413 aaPredicted RBP2.03□□□□□ -2.08
PTP4A1-205ENST00000626021 HERC2O95714 4834 aa2.03□□□□□ -2.08
PTP4A1-205ENST00000626021 MUC17Q685J3 4493 aa2.02□□□□□ -2.09
PTP4A1-205ENST00000626021 BIRC6Q9NR09 4857 aa2.02□□□□□ -2.09
PTP4A1-205ENST00000626021 ABCA13Q86UQ4 5058 aa2.02□□□□□ -2.09
PTP4A1-205ENST00000626021 KRTAP4-3Q9BYR4 195 aa2.01□□□□□ -2.09
PTP4A1-205ENST00000626021 LCE1AQ5T7P2 110 aa1.99□□□□□ -2.09
PTP4A1-205ENST00000626021 PLAC4Q8WY50 150 aa1.99□□□□□ -2.09
PTP4A1-205ENST00000626021 PP632Q6XCG6 107 aa1.97□□□□□ -2.09
PTP4A1-205ENST00000626021 MT3P25713 68 aa1.97□□□□□ -2.09
PTP4A1-205ENST00000626021 LRP2P98164 4655 aa1.96□□□□□ -2.1
PTP4A1-205ENST00000626021 LUZP6Q538Z0 58 aa1.95□□□□□ -2.1
PTP4A1-205ENST00000626021 R4GN34 69 aa1.95□□□□□ -2.1
PTP4A1-205ENST00000626021 KRTAP2-2Q9BYT5 123 aa1.94□□□□□ -2.1
PTP4A1-205ENST00000626021 LPAP08519 4548 aa1.93□□□□□ -2.1
PTP4A1-205ENST00000626021 SEC61BP60468 96 aaKnown RBP1.93□□□□□ -2.1
PTP4A1-205ENST00000626021 PCLOQ9Y6V0 5065 aa1.92□□□□□ -2.1
PTP4A1-205ENST00000626021 HERC1Q15751 4861 aa1.91□□□□□ -2.1
PTP4A1-205ENST00000626021 FLGP20930 4061 aaPredicted RBP1.91□□□□□ -2.1
PTP4A1-205ENST00000626021 OBSCNQ5VST9 7968 aa1.9□□□□□ -2.11
PTP4A1-205ENST00000626021 HMCN2Q8NDA2 5059 aa1.89□□□□□ -2.11
PTP4A1-205ENST00000626021 KRTAP19-2Q3LHN2 52 aa1.89□□□□□ -2.11
PTP4A1-205ENST00000626021 SPRR5A0A1B0GTR4 108 aa1.89□□□□□ -2.11
PTP4A1-205ENST00000626021 KRTAP4-1Q9BYQ7 146 aa1.89□□□□□ -2.11
PTP4A1-205ENST00000626021 CAMK2N1Q7Z7J9 78 aa1.85□□□□□ -2.11
PTP4A1-205ENST00000626021 TNP1P09430 55 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms