RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 DNAH11Q96DT5 4516 aa7.36□□□□□ -1.23
GABRB3-215ENST00000622697 ALMS1Q8TCU4 4167 aa7.28□□□□□ -1.24
GABRB3-215ENST00000622697 KRTAP15-1Q3LI76 137 aa7.25□□□□□ -1.25
GABRB3-215ENST00000622697 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
GABRB3-215ENST00000622697 STARD9Q9P2P6 4700 aa7.19□□□□□ -1.26
GABRB3-215ENST00000622697 DNHD1Q96M86 4753 aa7.18□□□□□ -1.26
GABRB3-215ENST00000622697 VPS13DQ5THJ4 4388 aa7.18□□□□□ -1.26
GABRB3-215ENST00000622697 DNAH17Q9UFH2 4485 aa7.16□□□□□ -1.26
GABRB3-215ENST00000622697 DNAH8Q96JB1 4490 aa7.1□□□□□ -1.27
GABRB3-215ENST00000622697 DNAH2Q9P225 4427 aa7.09□□□□□ -1.27
GABRB3-215ENST00000622697 FAT1Q14517 4588 aa7.09□□□□□ -1.27
GABRB3-215ENST00000622697 ANK2Q01484 3957 aa7.04□□□□□ -1.28
GABRB3-215ENST00000622697 KMT2AQ03164 3969 aa7.04□□□□□ -1.28
GABRB3-215ENST00000622697 LRP1BQ9NZR2 4599 aa7.04□□□□□ -1.28
GABRB3-215ENST00000622697 DNAH3Q8TD57 4116 aa7.03□□□□□ -1.28
GABRB3-215ENST00000622697 DYNC1H1Q14204 4646 aaKnown RBP7.02□□□□□ -1.28
GABRB3-215ENST00000622697 PRKDCP78527 4128 aaKnown RBP7□□□□□ -1.29
GABRB3-215ENST00000622697 KRTAP10-12P60413 245 aa6.97□□□□□ -1.29
GABRB3-215ENST00000622697 LYSTQ99698 3801 aa6.92□□□□□ -1.3
GABRB3-215ENST00000622697 FRAS1Q86XX4 4008 aa6.91□□□□□ -1.3
GABRB3-215ENST00000622697 KRTAP4-1Q9BYQ7 146 aa6.91□□□□□ -1.3
GABRB3-215ENST00000622697 LCE3AQ5TA76 89 aa6.9□□□□□ -1.31
GABRB3-215ENST00000622697 VPS13BQ7Z7G8 4022 aa6.86□□□□□ -1.31
GABRB3-215ENST00000622697 SACSQ9NZJ4 4579 aa6.85□□□□□ -1.31
GABRB3-215ENST00000622697 DYNC2H1Q8NCM8 4307 aaKnown RBP6.84□□□□□ -1.31
GABRB3-215ENST00000622697 KRTAP12-3P60328 96 aa6.83□□□□□ -1.32
GABRB3-215ENST00000622697 FAT2Q9NYQ8 4349 aa6.83□□□□□ -1.32
GABRB3-215ENST00000622697 CMYA5Q8N3K9 4069 aa6.81□□□□□ -1.32
GABRB3-215ENST00000622697 RYR1P21817 5038 aa6.81□□□□□ -1.32
GABRB3-215ENST00000622697 CRCT1Q9UGL9 99 aa6.78□□□□□ -1.32
GABRB3-215ENST00000622697 MYCBP2O75592 4640 aa6.74□□□□□ -1.33
GABRB3-215ENST00000622697 DNAH6Q9C0G6 4158 aa6.72□□□□□ -1.33
GABRB3-215ENST00000622697 APOBP04114 4563 aaKnown RBP6.72□□□□□ -1.33
GABRB3-215ENST00000622697 DNAH7Q8WXX0 4024 aa6.7□□□□□ -1.34
GABRB3-215ENST00000622697 KRTAP23-1A1A580 65 aa6.69□□□□□ -1.34
GABRB3-215ENST00000622697 HECTD4Q9Y4D8 3996 aa6.66□□□□□ -1.34
GABRB3-215ENST00000622697 INE1O15225 51 aa6.63□□□□□ -1.35
GABRB3-215ENST00000622697 LRP1Q07954 4544 aaKnown RBP6.58□□□□□ -1.36
GABRB3-215ENST00000622697 KRTAP17-1Q9BYP8 105 aa6.56□□□□□ -1.36
GABRB3-215ENST00000622697 MT1HP80294 61 aa6.56□□□□□ -1.36
GABRB3-215ENST00000622697 FAT3Q8TDW7 4589 aa6.52□□□□□ -1.37
GABRB3-215ENST00000622697 KIAA1109Q2LD37 5005 aa6.51□□□□□ -1.37
GABRB3-215ENST00000622697 MT2AP02795 61 aa6.49□□□□□ -1.37
GABRB3-215ENST00000622697 RYR3Q15413 4870 aa6.46□□□□□ -1.37
GABRB3-215ENST00000622697 HYDINQ4G0P3 5121 aa6.44□□□□□ -1.38
GABRB3-215ENST00000622697 SPRR2GQ9BYE4 73 aa6.43□□□□□ -1.38
GABRB3-215ENST00000622697 MT1FP04733 61 aa6.42□□□□□ -1.38
GABRB3-215ENST00000622697 PKHD1P08F94 4074 aa6.34□□□□□ -1.39
GABRB3-215ENST00000622697 KRTAP8-1Q8IUC2 63 aa6.32□□□□□ -1.4
GABRB3-215ENST00000622697 KRTAP10-5P60370 271 aa6.25□□□□□ -1.41
GABRB3-215ENST00000622697 LRP2P98164 4655 aa6.24□□□□□ -1.41
GABRB3-215ENST00000622697 RYR2Q92736 4967 aa6.23□□□□□ -1.41
GABRB3-215ENST00000622697 KRTAP19-5Q3LI72 72 aa6.2□□□□□ -1.42
GABRB3-215ENST00000622697 HSPG2P98160 4391 aa6.19□□□□□ -1.42
GABRB3-215ENST00000622697 KRTAP19-1Q8IUB9 90 aa6.15□□□□□ -1.42
GABRB3-215ENST00000622697 LPAP08519 4548 aa6.15□□□□□ -1.42
GABRB3-215ENST00000622697 PKD1P98161 4303 aa6.11□□□□□ -1.43
GABRB3-215ENST00000622697 KRTAP10-7P60409 375 aaPredicted RBP6.09□□□□□ -1.43
GABRB3-215ENST00000622697 HERC2O95714 4834 aa6.07□□□□□ -1.44
GABRB3-215ENST00000622697 LCE3CQ5T5A8 94 aa6.05□□□□□ -1.44
GABRB3-215ENST00000622697 KMT2CQ8NEZ4 4911 aaKnown RBP6.05□□□□□ -1.44
GABRB3-215ENST00000622697 KRTAP19-8Q3LI54 63 aa5.97□□□□□ -1.45
GABRB3-215ENST00000622697 MT1XP80297 61 aa5.96□□□□□ -1.46
GABRB3-215ENST00000622697 TNXBP22105 4242 aa5.92□□□□□ -1.46
GABRB3-215ENST00000622697 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
GABRB3-215ENST00000622697 KRTAP9-8Q9BYQ0 159 aa5.91□□□□□ -1.46
GABRB3-215ENST00000622697 MT1BP07438 61 aa5.9□□□□□ -1.46
GABRB3-215ENST00000622697 LCE2CQ5TA81 110 aa5.89□□□□□ -1.47
GABRB3-215ENST00000622697 PKHD1L1Q86WI1 4243 aa5.87□□□□□ -1.47
GABRB3-215ENST00000622697 KRTAP4-8A0A0G2JLE6 195 aa5.8□□□□□ -1.48
GABRB3-215ENST00000622697 KRTAP4-8Q9BYQ9 185 aa5.8□□□□□ -1.48
GABRB3-215ENST00000622697 PCLOQ9Y6V0 5065 aa5.78□□□□□ -1.48
GABRB3-215ENST00000622697 HERC1Q15751 4861 aa5.76□□□□□ -1.49
GABRB3-215ENST00000622697 BIRC6Q9NR09 4857 aa5.75□□□□□ -1.49
GABRB3-215ENST00000622697 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
GABRB3-215ENST00000622697 KRTAP19-2Q3LHN2 52 aa5.71□□□□□ -1.5
GABRB3-215ENST00000622697 SPRR5A0A1B0GTR4 108 aa5.7□□□□□ -1.5
GABRB3-215ENST00000622697 EPPK1P58107 5090 aaKnown RBP5.66□□□□□ -1.5
GABRB3-215ENST00000622697 MT1GP13640 62 aa5.63□□□□□ -1.51
GABRB3-215ENST00000622697 MUC17Q685J3 4493 aa5.62□□□□□ -1.51
GABRB3-215ENST00000622697 FLGP20930 4061 aaPredicted RBP5.61□□□□□ -1.51
GABRB3-215ENST00000622697 ABCA13Q86UQ4 5058 aa5.59□□□□□ -1.51
GABRB3-215ENST00000622697 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
GABRB3-215ENST00000622697 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
GABRB3-215ENST00000622697 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
GABRB3-215ENST00000622697 LCE2BO14633 110 aa5.52□□□□□ -1.53
GABRB3-215ENST00000622697 KRTAP12-4P60329 112 aa5.46□□□□□ -1.54
GABRB3-215ENST00000622697 SPRR2EP22531 72 aa5.45□□□□□ -1.54
GABRB3-215ENST00000622697 SPRR2BP35325 72 aa5.45□□□□□ -1.54
GABRB3-215ENST00000622697 SPRR2AP35326 72 aa5.45□□□□□ -1.54
GABRB3-215ENST00000622697 UBR4Q5T4S7 5183 aa5.34□□□□□ -1.55
GABRB3-215ENST00000622697 FAT4Q6V0I7 4981 aa5.34□□□□□ -1.55
GABRB3-215ENST00000622697 MT1LQ93083 61 aa5.33□□□□□ -1.56
GABRB3-215ENST00000622697 FSIP2Q5CZC0 6907 aa5.33□□□□□ -1.56
GABRB3-215ENST00000622697 MUC2Q02817 5179 aa5.32□□□□□ -1.56
GABRB3-215ENST00000622697 HMCN2Q8NDA2 5059 aa5.31□□□□□ -1.56
GABRB3-215ENST00000622697 MT1EP04732 61 aa5.29□□□□□ -1.56
GABRB3-215ENST00000622697 RNF213Q63HN8 5207 aa5.27□□□□□ -1.57
GABRB3-215ENST00000622697 KRTAP19-3Q7Z4W3 81 aa5.25□□□□□ -1.57
GABRB3-215ENST00000622697 SPRR2DP22532 72 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms