RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 AKAP9Q99996 3911 aa5.65□□□□□ -1.51
NLRC3-204ENST00000615877 OTOGQ6ZRI0 2925 aa5.64□□□□□ -1.51
NLRC3-204ENST00000615877 FBN1P35555 2871 aaKnown RBP5.64□□□□□ -1.51
NLRC3-204ENST00000615877 CSMD3Q7Z407 3707 aa5.62□□□□□ -1.51
NLRC3-204ENST00000615877 SRRM2Q9UQ35 2752 aaKnown RBP5.55□□□□□ -1.52
NLRC3-204ENST00000615877 ZNF469Q96JG9 3925 aaPredicted RBP5.55□□□□□ -1.52
NLRC3-204ENST00000615877 COL7A1Q02388 2944 aa5.46□□□□□ -1.54
NLRC3-204ENST00000615877 SPRR2FQ96RM1 72 aa5.32□□□□□ -1.56
NLRC3-204ENST00000615877 MT1HP80294 61 aa5.3□□□□□ -1.56
NLRC3-204ENST00000615877 DNAH9Q9NYC9 4486 aa5.28□□□□□ -1.56
NLRC3-204ENST00000615877 KRTAP4-1Q9BYQ7 146 aa5.26□□□□□ -1.57
NLRC3-204ENST00000615877 KRTAP10-7P60409 375 aaPredicted RBP5.24□□□□□ -1.57
NLRC3-204ENST00000615877 DNAH2Q9P225 4427 aa5.24□□□□□ -1.57
NLRC3-204ENST00000615877 DNAH10Q8IVF4 4471 aa5.21□□□□□ -1.58
NLRC3-204ENST00000615877 DNAH1Q9P2D7 4330 aa5.2□□□□□ -1.58
NLRC3-204ENST00000615877 DNAH11Q96DT5 4516 aa5.17□□□□□ -1.58
NLRC3-204ENST00000615877 DNAH5Q8TE73 4624 aa5.15□□□□□ -1.58
NLRC3-204ENST00000615877 KRTAP19-5Q3LI72 72 aa5.15□□□□□ -1.59
NLRC3-204ENST00000615877 MT2AP02795 61 aa5.14□□□□□ -1.59
NLRC3-204ENST00000615877 SPRR2GQ9BYE4 73 aa5.14□□□□□ -1.59
NLRC3-204ENST00000615877 PLECQ15149 4684 aaKnown RBP5.12□□□□□ -1.59
NLRC3-204ENST00000615877 DNAH3Q8TD57 4116 aa5.11□□□□□ -1.59
NLRC3-204ENST00000615877 DNAH17Q9UFH2 4485 aa5.08□□□□□ -1.6
NLRC3-204ENST00000615877 SPRR2EP22531 72 aa5.07□□□□□ -1.6
NLRC3-204ENST00000615877 SPRR2BP35325 72 aa5.07□□□□□ -1.6
NLRC3-204ENST00000615877 SPRR2AP35326 72 aa5.07□□□□□ -1.6
NLRC3-204ENST00000615877 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
NLRC3-204ENST00000615877 MT1FP04733 61 aa5.06□□□□□ -1.6
NLRC3-204ENST00000615877 VPS13DQ5THJ4 4388 aa5.05□□□□□ -1.6
NLRC3-204ENST00000615877 CMYA5Q8N3K9 4069 aa5.05□□□□□ -1.6
NLRC3-204ENST00000615877 DNAH8Q96JB1 4490 aa5.04□□□□□ -1.6
NLRC3-204ENST00000615877 FRAS1Q86XX4 4008 aa5.04□□□□□ -1.6
NLRC3-204ENST00000615877 KMT2AQ03164 3969 aa5.03□□□□□ -1.6
NLRC3-204ENST00000615877 ANK2Q01484 3957 aa4.99□□□□□ -1.61
NLRC3-204ENST00000615877 FAT2Q9NYQ8 4349 aa4.95□□□□□ -1.62
NLRC3-204ENST00000615877 STARD9Q9P2P6 4700 aa4.94□□□□□ -1.62
NLRC3-204ENST00000615877 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
NLRC3-204ENST00000615877 LYSTQ99698 3801 aa4.92□□□□□ -1.62
NLRC3-204ENST00000615877 SACSQ9NZJ4 4579 aa4.9□□□□□ -1.63
NLRC3-204ENST00000615877 SPRR2DP22532 72 aa4.89□□□□□ -1.63
NLRC3-204ENST00000615877 FAT1Q14517 4588 aa4.89□□□□□ -1.63
NLRC3-204ENST00000615877 DYNC2H1Q8NCM8 4307 aaKnown RBP4.87□□□□□ -1.63
NLRC3-204ENST00000615877 VPS13BQ7Z7G8 4022 aa4.85□□□□□ -1.63
NLRC3-204ENST00000615877 KRTAP19-4Q3LI73 84 aa4.85□□□□□ -1.63
NLRC3-204ENST00000615877 PRKDCP78527 4128 aaKnown RBP4.84□□□□□ -1.63
NLRC3-204ENST00000615877 LRP1BQ9NZR2 4599 aa4.84□□□□□ -1.64
NLRC3-204ENST00000615877 DYNC1H1Q14204 4646 aaKnown RBP4.84□□□□□ -1.64
NLRC3-204ENST00000615877 DNAH6Q9C0G6 4158 aa4.81□□□□□ -1.64
NLRC3-204ENST00000615877 DNAH7Q8WXX0 4024 aa4.8□□□□□ -1.64
NLRC3-204ENST00000615877 MT1GP13640 62 aa4.79□□□□□ -1.64
NLRC3-204ENST00000615877 LCE2BO14633 110 aa4.78□□□□□ -1.64
NLRC3-204ENST00000615877 HECTD4Q9Y4D8 3996 aa4.73□□□□□ -1.65
NLRC3-204ENST00000615877 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
NLRC3-204ENST00000615877 APOBP04114 4563 aaKnown RBP4.7□□□□□ -1.66
NLRC3-204ENST00000615877 KRTAP19-1Q8IUB9 90 aa4.7□□□□□ -1.66
NLRC3-204ENST00000615877 DNHD1Q96M86 4753 aa4.69□□□□□ -1.66
NLRC3-204ENST00000615877 SPRR5A0A1B0GTR4 108 aa4.67□□□□□ -1.66
NLRC3-204ENST00000615877 KRTAP12-4P60329 112 aa4.67□□□□□ -1.66
NLRC3-204ENST00000615877 MT1XP80297 61 aa4.66□□□□□ -1.66
NLRC3-204ENST00000615877 KRTAP4-8A0A0G2JLE6 195 aa4.61□□□□□ -1.67
NLRC3-204ENST00000615877 KRTAP4-8Q9BYQ9 185 aa4.61□□□□□ -1.67
NLRC3-204ENST00000615877 RYR1P21817 5038 aa4.59□□□□□ -1.67
NLRC3-204ENST00000615877 MT1BP07438 61 aa4.55□□□□□ -1.68
NLRC3-204ENST00000615877 KRTAP17-1Q9BYP8 105 aa4.52□□□□□ -1.69
NLRC3-204ENST00000615877 LRP1Q07954 4544 aaKnown RBP4.52□□□□□ -1.69
NLRC3-204ENST00000615877 FAT3Q8TDW7 4589 aa4.52□□□□□ -1.69
NLRC3-204ENST00000615877 LCE2CQ5TA81 110 aa4.51□□□□□ -1.69
NLRC3-204ENST00000615877 LCE2DQ5TA82 110 aaPredicted RBP4.48□□□□□ -1.69
NLRC3-204ENST00000615877 LCE3DQ9BYE3 92 aa4.46□□□□□ -1.7
NLRC3-204ENST00000615877 MT4P47944 62 aa4.45□□□□□ -1.7
NLRC3-204ENST00000615877 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
NLRC3-204ENST00000615877 RYR3Q15413 4870 aa4.43□□□□□ -1.7
NLRC3-204ENST00000615877 LPAP08519 4548 aa4.43□□□□□ -1.7
NLRC3-204ENST00000615877 HYDINQ4G0P3 5121 aa4.43□□□□□ -1.7
NLRC3-204ENST00000615877 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.71
NLRC3-204ENST00000615877 HSPG2P98160 4391 aa4.39□□□□□ -1.71
NLRC3-204ENST00000615877 PKD1P98161 4303 aa4.37□□□□□ -1.71
NLRC3-204ENST00000615877 MYCBP2O75592 4640 aa4.36□□□□□ -1.71
NLRC3-204ENST00000615877 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
NLRC3-204ENST00000615877 HERC1Q15751 4861 aa4.35□□□□□ -1.71
NLRC3-204ENST00000615877 KRTAP9-3Q9BYQ3 159 aa4.35□□□□□ -1.71
NLRC3-204ENST00000615877 PKHD1L1Q86WI1 4243 aa4.34□□□□□ -1.71
NLRC3-204ENST00000615877 PKHD1P08F94 4074 aa4.33□□□□□ -1.72
NLRC3-204ENST00000615877 RYR2Q92736 4967 aa4.31□□□□□ -1.72
NLRC3-204ENST00000615877 KRTAP19-3Q7Z4W3 81 aa4.27□□□□□ -1.73
NLRC3-204ENST00000615877 MT1LQ93083 61 aa4.26□□□□□ -1.73
NLRC3-204ENST00000615877 TNXBP22105 4242 aa4.26□□□□□ -1.73
NLRC3-204ENST00000615877 LCE1BQ5T7P3 118 aa4.25□□□□□ -1.73
NLRC3-204ENST00000615877 MT1EP04732 61 aa4.19□□□□□ -1.74
NLRC3-204ENST00000615877 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
NLRC3-204ENST00000615877 LOC100996750A0A140TA64 210 aa4.19□□□□□ -1.74
NLRC3-204ENST00000615877 KRTAP9-2Q9BYQ4 174 aa4.17□□□□□ -1.74
NLRC3-204ENST00000615877 KIAA1109Q2LD37 5005 aa4.16□□□□□ -1.74
NLRC3-204ENST00000615877 PRM1P04553 51 aa4.15□□□□□ -1.74
NLRC3-204ENST00000615877 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
NLRC3-204ENST00000615877 MT3P25713 68 aa4.09□□□□□ -1.76
NLRC3-204ENST00000615877 LRP2P98164 4655 aa4.07□□□□□ -1.76
NLRC3-204ENST00000615877 KRTAP19-2Q3LHN2 52 aa4.07□□□□□ -1.76
NLRC3-204ENST00000615877 MT1MQ8N339 61 aa4.07□□□□□ -1.76
NLRC3-204ENST00000615877 HERC2O95714 4834 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms