RNA–Protein interactions for RNA: ENST00000615676.1

YTHDF3-208, Transcript of YTH N6-methyladenosine RNA binding protein 3, humanhuman

TSL 1 (best)

Gene YTHDF3, Length 5,092 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3-208ENST00000615676 ZNF469Q96JG9 3925 aaPredicted RBP5.64□□□□□ -1.51
YTHDF3-208ENST00000615676 KRTAP10-5P60370 271 aa5.6□□□□□ -1.51
YTHDF3-208ENST00000615676 ALMS1Q8TCU4 4167 aa5.57□□□□□ -1.52
YTHDF3-208ENST00000615676 HUWE1Q7Z6Z7 4374 aaKnown RBP5.56□□□□□ -1.52
YTHDF3-208ENST00000615676 AKAP9Q99996 3911 aa5.47□□□□□ -1.53
YTHDF3-208ENST00000615676 MT1HP80294 61 aa5.43□□□□□ -1.54
YTHDF3-208ENST00000615676 TRRAPQ9Y4A5 3859 aa5.42□□□□□ -1.54
YTHDF3-208ENST00000615676 SPRR2GQ9BYE4 73 aa5.38□□□□□ -1.55
YTHDF3-208ENST00000615676 MT2AP02795 61 aa5.37□□□□□ -1.55
YTHDF3-208ENST00000615676 KRTAP4-1Q9BYQ7 146 aa5.37□□□□□ -1.55
YTHDF3-208ENST00000615676 DNAH5Q8TE73 4624 aa5.33□□□□□ -1.56
YTHDF3-208ENST00000615676 KRTAP10-7P60409 375 aaPredicted RBP5.3□□□□□ -1.56
YTHDF3-208ENST00000615676 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
YTHDF3-208ENST00000615676 PLECQ15149 4684 aaKnown RBP5.28□□□□□ -1.56
YTHDF3-208ENST00000615676 DNAH2Q9P225 4427 aa5.28□□□□□ -1.56
YTHDF3-208ENST00000615676 DNAH10Q8IVF4 4471 aa5.26□□□□□ -1.57
YTHDF3-208ENST00000615676 SPRR2FQ96RM1 72 aa5.25□□□□□ -1.57
YTHDF3-208ENST00000615676 DNAH1Q9P2D7 4330 aa5.23□□□□□ -1.57
YTHDF3-208ENST00000615676 MT1FP04733 61 aa5.22□□□□□ -1.57
YTHDF3-208ENST00000615676 DNAH11Q96DT5 4516 aa5.21□□□□□ -1.57
YTHDF3-208ENST00000615676 KRTAP19-5Q3LI72 72 aa5.2□□□□□ -1.58
YTHDF3-208ENST00000615676 DNAH9Q9NYC9 4486 aa5.19□□□□□ -1.58
YTHDF3-208ENST00000615676 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
YTHDF3-208ENST00000615676 FAT1Q14517 4588 aa5.12□□□□□ -1.59
YTHDF3-208ENST00000615676 ANK2Q01484 3957 aa5.09□□□□□ -1.59
YTHDF3-208ENST00000615676 DNAH17Q9UFH2 4485 aa4.99□□□□□ -1.61
YTHDF3-208ENST00000615676 DYNC1H1Q14204 4646 aaKnown RBP4.99□□□□□ -1.61
YTHDF3-208ENST00000615676 KRTAP19-8Q3LI54 63 aa4.98□□□□□ -1.61
YTHDF3-208ENST00000615676 VPS13DQ5THJ4 4388 aa4.94□□□□□ -1.62
YTHDF3-208ENST00000615676 CMYA5Q8N3K9 4069 aa4.94□□□□□ -1.62
YTHDF3-208ENST00000615676 SPRR2EP22531 72 aa4.93□□□□□ -1.62
YTHDF3-208ENST00000615676 SPRR2BP35325 72 aa4.93□□□□□ -1.62
YTHDF3-208ENST00000615676 SPRR2AP35326 72 aa4.93□□□□□ -1.62
YTHDF3-208ENST00000615676 RYR1P21817 5038 aa4.92□□□□□ -1.62
YTHDF3-208ENST00000615676 SACSQ9NZJ4 4579 aa4.91□□□□□ -1.62
YTHDF3-208ENST00000615676 CSMD3Q7Z407 3707 aa4.9□□□□□ -1.62
YTHDF3-208ENST00000615676 LRP1BQ9NZR2 4599 aa4.9□□□□□ -1.63
YTHDF3-208ENST00000615676 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
YTHDF3-208ENST00000615676 DNHD1Q96M86 4753 aa4.87□□□□□ -1.63
YTHDF3-208ENST00000615676 DNAH3Q8TD57 4116 aa4.86□□□□□ -1.63
YTHDF3-208ENST00000615676 LYSTQ99698 3801 aa4.86□□□□□ -1.63
YTHDF3-208ENST00000615676 FAT2Q9NYQ8 4349 aa4.85□□□□□ -1.63
YTHDF3-208ENST00000615676 DNAH8Q96JB1 4490 aa4.85□□□□□ -1.63
YTHDF3-208ENST00000615676 LRP1Q07954 4544 aaKnown RBP4.82□□□□□ -1.64
YTHDF3-208ENST00000615676 DYNC2H1Q8NCM8 4307 aaKnown RBP4.81□□□□□ -1.64
YTHDF3-208ENST00000615676 MT1XP80297 61 aa4.8□□□□□ -1.64
YTHDF3-208ENST00000615676 SPRR2DP22532 72 aa4.79□□□□□ -1.64
YTHDF3-208ENST00000615676 LCE3BQ5TA77 95 aa4.79□□□□□ -1.64
YTHDF3-208ENST00000615676 KRTAP12-4P60329 112 aa4.78□□□□□ -1.64
YTHDF3-208ENST00000615676 APOBP04114 4563 aaKnown RBP4.77□□□□□ -1.65
YTHDF3-208ENST00000615676 LCE2BO14633 110 aa4.77□□□□□ -1.65
YTHDF3-208ENST00000615676 DNAH7Q8WXX0 4024 aa4.75□□□□□ -1.65
YTHDF3-208ENST00000615676 MT1GP13640 62 aa4.74□□□□□ -1.65
YTHDF3-208ENST00000615676 MT1BP07438 61 aa4.73□□□□□ -1.65
YTHDF3-208ENST00000615676 HERC1Q15751 4861 aa4.73□□□□□ -1.65
YTHDF3-208ENST00000615676 RYR3Q15413 4870 aa4.71□□□□□ -1.66
YTHDF3-208ENST00000615676 FAT3Q8TDW7 4589 aa4.71□□□□□ -1.66
YTHDF3-208ENST00000615676 PRKDCP78527 4128 aaKnown RBP4.7□□□□□ -1.66
YTHDF3-208ENST00000615676 KRTAP9-8Q9BYQ0 159 aa4.67□□□□□ -1.66
YTHDF3-208ENST00000615676 STARD9Q9P2P6 4700 aa4.67□□□□□ -1.66
YTHDF3-208ENST00000615676 KMT2AQ03164 3969 aa4.63□□□□□ -1.67
YTHDF3-208ENST00000615676 LCE3DQ9BYE3 92 aa4.6□□□□□ -1.67
YTHDF3-208ENST00000615676 KRTAP9-3Q9BYQ3 159 aa4.6□□□□□ -1.67
YTHDF3-208ENST00000615676 KRTAP4-8A0A0G2JLE6 195 aa4.57□□□□□ -1.68
YTHDF3-208ENST00000615676 SPRR5A0A1B0GTR4 108 aa4.57□□□□□ -1.68
YTHDF3-208ENST00000615676 KRTAP4-8Q9BYQ9 185 aa4.57□□□□□ -1.68
YTHDF3-208ENST00000615676 RYR2Q92736 4967 aa4.56□□□□□ -1.68
YTHDF3-208ENST00000615676 KRTAP17-1Q9BYP8 105 aa4.56□□□□□ -1.68
YTHDF3-208ENST00000615676 HSPG2P98160 4391 aa4.55□□□□□ -1.68
YTHDF3-208ENST00000615676 FRAS1Q86XX4 4008 aa4.55□□□□□ -1.68
YTHDF3-208ENST00000615676 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
YTHDF3-208ENST00000615676 VPS13BQ7Z7G8 4022 aa4.53□□□□□ -1.68
YTHDF3-208ENST00000615676 HECTD4Q9Y4D8 3996 aa4.52□□□□□ -1.69
YTHDF3-208ENST00000615676 LCE2CQ5TA81 110 aa4.51□□□□□ -1.69
YTHDF3-208ENST00000615676 KRTAP19-3Q7Z4W3 81 aa4.5□□□□□ -1.69
YTHDF3-208ENST00000615676 DNAH6Q9C0G6 4158 aa4.5□□□□□ -1.69
YTHDF3-208ENST00000615676 KIAA1109Q2LD37 5005 aa4.48□□□□□ -1.69
YTHDF3-208ENST00000615676 MT1LQ93083 61 aa4.45□□□□□ -1.7
YTHDF3-208ENST00000615676 PKD1P98161 4303 aa4.43□□□□□ -1.7
YTHDF3-208ENST00000615676 HYDINQ4G0P3 5121 aa4.43□□□□□ -1.7
YTHDF3-208ENST00000615676 MYCBP2O75592 4640 aa4.42□□□□□ -1.7
YTHDF3-208ENST00000615676 LCE2DQ5TA82 110 aaPredicted RBP4.39□□□□□ -1.71
YTHDF3-208ENST00000615676 MT1EP04732 61 aa4.37□□□□□ -1.71
YTHDF3-208ENST00000615676 PKHD1P08F94 4074 aa4.35□□□□□ -1.71
YTHDF3-208ENST00000615676 PCLOQ9Y6V0 5065 aa4.33□□□□□ -1.72
YTHDF3-208ENST00000615676 BIRC6Q9NR09 4857 aa4.32□□□□□ -1.72
YTHDF3-208ENST00000615676 MT3P25713 68 aa4.32□□□□□ -1.72
YTHDF3-208ENST00000615676 HERC2O95714 4834 aa4.31□□□□□ -1.72
YTHDF3-208ENST00000615676 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
YTHDF3-208ENST00000615676 PKHD1L1Q86WI1 4243 aa4.28□□□□□ -1.72
YTHDF3-208ENST00000615676 MT1MQ8N339 61 aa4.25□□□□□ -1.73
YTHDF3-208ENST00000615676 KRTAP19-6Q3LI70 58 aa4.23□□□□□ -1.73
YTHDF3-208ENST00000615676 KMT2CQ8NEZ4 4911 aaKnown RBP4.22□□□□□ -1.73
YTHDF3-208ENST00000615676 KRTAP19-2Q3LHN2 52 aa4.22□□□□□ -1.73
YTHDF3-208ENST00000615676 EPPK1P58107 5090 aaKnown RBP4.21□□□□□ -1.74
YTHDF3-208ENST00000615676 MT4P47944 62 aa4.18□□□□□ -1.74
YTHDF3-208ENST00000615676 LRP2P98164 4655 aa4.13□□□□□ -1.75
YTHDF3-208ENST00000615676 SYNE1Q8NF91 8797 aaKnown RBP4.12□□□□□ -1.75
YTHDF3-208ENST00000615676 PRM1P04553 51 aa4.11□□□□□ -1.75
YTHDF3-208ENST00000615676 KRTAP9-2Q9BYQ4 174 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms