RNA–Protein interactions for RNA: ENST00000615301.4

SHTN1-207, Transcript of shootin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHTN1, Length 6,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-207ENST00000615301 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
SHTN1-207ENST00000615301 VPS13CQ709C8 3753 aa4.01□□□□□ -1.77
SHTN1-207ENST00000615301 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
SHTN1-207ENST00000615301 DNAH5Q8TE73 4624 aa3.97□□□□□ -1.77
SHTN1-207ENST00000615301 ZNF469Q96JG9 3925 aaPredicted RBP3.97□□□□□ -1.77
SHTN1-207ENST00000615301 FAT1Q14517 4588 aa3.96□□□□□ -1.78
SHTN1-207ENST00000615301 KRTAP4-1Q9BYQ7 146 aa3.93□□□□□ -1.78
SHTN1-207ENST00000615301 AKAP9Q99996 3911 aa3.9□□□□□ -1.78
SHTN1-207ENST00000615301 PLECQ15149 4684 aaKnown RBP3.9□□□□□ -1.78
SHTN1-207ENST00000615301 DNAH10Q8IVF4 4471 aa3.87□□□□□ -1.79
SHTN1-207ENST00000615301 DNAH11Q96DT5 4516 aa3.85□□□□□ -1.79
SHTN1-207ENST00000615301 DNHD1Q96M86 4753 aa3.83□□□□□ -1.8
SHTN1-207ENST00000615301 DNAH8Q96JB1 4490 aa3.82□□□□□ -1.8
SHTN1-207ENST00000615301 MT1HP80294 61 aa3.81□□□□□ -1.8
SHTN1-207ENST00000615301 DNAH1Q9P2D7 4330 aa3.8□□□□□ -1.8
SHTN1-207ENST00000615301 MT2AP02795 61 aa3.8□□□□□ -1.8
SHTN1-207ENST00000615301 DNAH9Q9NYC9 4486 aa3.79□□□□□ -1.8
SHTN1-207ENST00000615301 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
SHTN1-207ENST00000615301 ALMS1Q8TCU4 4167 aa3.78□□□□□ -1.8
SHTN1-207ENST00000615301 RYR1P21817 5038 aa3.74□□□□□ -1.81
SHTN1-207ENST00000615301 MT1FP04733 61 aa3.74□□□□□ -1.81
SHTN1-207ENST00000615301 SPRR2GQ9BYE4 73 aa3.73□□□□□ -1.81
SHTN1-207ENST00000615301 DNAH2Q9P225 4427 aa3.73□□□□□ -1.81
SHTN1-207ENST00000615301 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
SHTN1-207ENST00000615301 DYNC1H1Q14204 4646 aaKnown RBP3.71□□□□□ -1.82
SHTN1-207ENST00000615301 SPRR2FQ96RM1 72 aa3.7□□□□□ -1.82
SHTN1-207ENST00000615301 SACSQ9NZJ4 4579 aa3.67□□□□□ -1.82
SHTN1-207ENST00000615301 KRTAP10-7P60409 375 aaPredicted RBP3.66□□□□□ -1.82
SHTN1-207ENST00000615301 LRP1BQ9NZR2 4599 aa3.65□□□□□ -1.82
SHTN1-207ENST00000615301 DNAH17Q9UFH2 4485 aa3.65□□□□□ -1.83
SHTN1-207ENST00000615301 APOBP04114 4563 aaKnown RBP3.63□□□□□ -1.83
SHTN1-207ENST00000615301 MYCBP2O75592 4640 aa3.62□□□□□ -1.83
SHTN1-207ENST00000615301 ANK2Q01484 3957 aa3.6□□□□□ -1.83
SHTN1-207ENST00000615301 PRKDCP78527 4128 aaKnown RBP3.58□□□□□ -1.84
SHTN1-207ENST00000615301 VPS13DQ5THJ4 4388 aa3.58□□□□□ -1.84
SHTN1-207ENST00000615301 LCE3BQ5TA77 95 aa3.58□□□□□ -1.84
SHTN1-207ENST00000615301 STARD9Q9P2P6 4700 aa3.54□□□□□ -1.84
SHTN1-207ENST00000615301 FAT3Q8TDW7 4589 aa3.52□□□□□ -1.85
SHTN1-207ENST00000615301 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
SHTN1-207ENST00000615301 KRTAP19-4Q3LI73 84 aa3.52□□□□□ -1.85
SHTN1-207ENST00000615301 VPS13BQ7Z7G8 4022 aa3.51□□□□□ -1.85
SHTN1-207ENST00000615301 KRTAP19-1Q8IUB9 90 aa3.51□□□□□ -1.85
SHTN1-207ENST00000615301 MT1GP13640 62 aa3.5□□□□□ -1.85
SHTN1-207ENST00000615301 FAT2Q9NYQ8 4349 aa3.48□□□□□ -1.85
SHTN1-207ENST00000615301 RYR3Q15413 4870 aa3.46□□□□□ -1.86
SHTN1-207ENST00000615301 MT1XP80297 61 aa3.45□□□□□ -1.86
SHTN1-207ENST00000615301 LYSTQ99698 3801 aa3.45□□□□□ -1.86
SHTN1-207ENST00000615301 KIAA1109Q2LD37 5005 aa3.44□□□□□ -1.86
SHTN1-207ENST00000615301 KRTAP4-8A0A0G2JLE6 195 aa3.44□□□□□ -1.86
SHTN1-207ENST00000615301 KRTAP4-8Q9BYQ9 185 aa3.44□□□□□ -1.86
SHTN1-207ENST00000615301 DYNC2H1Q8NCM8 4307 aaKnown RBP3.43□□□□□ -1.86
SHTN1-207ENST00000615301 DNAH3Q8TD57 4116 aa3.42□□□□□ -1.86
SHTN1-207ENST00000615301 KRTAP19-8Q3LI54 63 aa3.41□□□□□ -1.86
SHTN1-207ENST00000615301 KRTAP17-1Q9BYP8 105 aa3.41□□□□□ -1.86
SHTN1-207ENST00000615301 SPRR2EP22531 72 aa3.41□□□□□ -1.86
SHTN1-207ENST00000615301 SPRR2BP35325 72 aa3.41□□□□□ -1.86
SHTN1-207ENST00000615301 SPRR2AP35326 72 aa3.41□□□□□ -1.86
SHTN1-207ENST00000615301 LRP1Q07954 4544 aaKnown RBP3.38□□□□□ -1.87
SHTN1-207ENST00000615301 MT1BP07438 61 aa3.38□□□□□ -1.87
SHTN1-207ENST00000615301 KMT2AQ03164 3969 aa3.37□□□□□ -1.87
SHTN1-207ENST00000615301 RYR2Q92736 4967 aa3.36□□□□□ -1.87
SHTN1-207ENST00000615301 CMYA5Q8N3K9 4069 aa3.36□□□□□ -1.87
SHTN1-207ENST00000615301 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
SHTN1-207ENST00000615301 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
SHTN1-207ENST00000615301 FRAS1Q86XX4 4008 aa3.32□□□□□ -1.88
SHTN1-207ENST00000615301 KMT2CQ8NEZ4 4911 aaKnown RBP3.32□□□□□ -1.88
SHTN1-207ENST00000615301 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
SHTN1-207ENST00000615301 HERC1Q15751 4861 aa3.3□□□□□ -1.88
SHTN1-207ENST00000615301 HYDINQ4G0P3 5121 aa3.29□□□□□ -1.88
SHTN1-207ENST00000615301 BIRC6Q9NR09 4857 aa3.29□□□□□ -1.88
SHTN1-207ENST00000615301 KRTAP9-8Q9BYQ0 159 aa3.29□□□□□ -1.88
SHTN1-207ENST00000615301 LRP2P98164 4655 aa3.28□□□□□ -1.88
SHTN1-207ENST00000615301 SPRR2DP22532 72 aa3.28□□□□□ -1.88
SHTN1-207ENST00000615301 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
SHTN1-207ENST00000615301 LCE2BO14633 110 aa3.26□□□□□ -1.89
SHTN1-207ENST00000615301 LCE3EQ5T5B0 92 aa3.26□□□□□ -1.89
SHTN1-207ENST00000615301 HERC2O95714 4834 aa3.25□□□□□ -1.89
SHTN1-207ENST00000615301 DNAH7Q8WXX0 4024 aa3.24□□□□□ -1.89
SHTN1-207ENST00000615301 DNAH6Q9C0G6 4158 aa3.21□□□□□ -1.9
SHTN1-207ENST00000615301 KRTAP9-3Q9BYQ3 159 aa3.21□□□□□ -1.9
SHTN1-207ENST00000615301 PCLOQ9Y6V0 5065 aa3.21□□□□□ -1.9
SHTN1-207ENST00000615301 LCE2CQ5TA81 110 aa3.19□□□□□ -1.9
SHTN1-207ENST00000615301 EPPK1P58107 5090 aaKnown RBP3.17□□□□□ -1.9
SHTN1-207ENST00000615301 PKD1P98161 4303 aa3.17□□□□□ -1.9
SHTN1-207ENST00000615301 LPAP08519 4548 aa3.15□□□□□ -1.9
SHTN1-207ENST00000615301 MT1LQ93083 61 aa3.15□□□□□ -1.91
SHTN1-207ENST00000615301 PKHD1P08F94 4074 aa3.14□□□□□ -1.91
SHTN1-207ENST00000615301 KRTAP19-3Q7Z4W3 81 aa3.13□□□□□ -1.91
SHTN1-207ENST00000615301 HSPG2P98160 4391 aa3.13□□□□□ -1.91
SHTN1-207ENST00000615301 LOC100996750A0A140TA64 210 aa3.12□□□□□ -1.91
SHTN1-207ENST00000615301 PRM1P04553 51 aa3.12□□□□□ -1.91
SHTN1-207ENST00000615301 MT1EP04732 61 aa3.09□□□□□ -1.91
SHTN1-207ENST00000615301 HECTD4Q9Y4D8 3996 aa3.09□□□□□ -1.91
SHTN1-207ENST00000615301 ABCA13Q86UQ4 5058 aa3.08□□□□□ -1.92
SHTN1-207ENST00000615301 KRTAP4-3Q9BYR4 195 aa3.08□□□□□ -1.92
SHTN1-207ENST00000615301 FSIP2Q5CZC0 6907 aa3.06□□□□□ -1.92
SHTN1-207ENST00000615301 LCE2DQ5TA82 110 aaPredicted RBP3.02□□□□□ -1.93
SHTN1-207ENST00000615301 MT1MQ8N339 61 aa3.01□□□□□ -1.93
SHTN1-207ENST00000615301 MT4P47944 62 aa3.01□□□□□ -1.93
SHTN1-207ENST00000615301 UBR4Q5T4S7 5183 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms