RNA–Protein interactions for RNA: ENST00000614410.4

ALMS1-207, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ALMS1, Length 11,700 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-207ENST00000614410 KRTAP12-3P60328 96 aa3.14□□□□□ -1.91
ALMS1-207ENST00000614410 LYSTQ99698 3801 aa3.13□□□□□ -1.91
ALMS1-207ENST00000614410 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
ALMS1-207ENST00000614410 VPS13BQ7Z7G8 4022 aa3.13□□□□□ -1.91
ALMS1-207ENST00000614410 DNAH1Q9P2D7 4330 aa3.11□□□□□ -1.91
ALMS1-207ENST00000614410 ANK2Q01484 3957 aa3.11□□□□□ -1.91
ALMS1-207ENST00000614410 DNAH10Q8IVF4 4471 aa3.1□□□□□ -1.91
ALMS1-207ENST00000614410 KRTAP3-3Q9BYR6 98 aa3.09□□□□□ -1.91
ALMS1-207ENST00000614410 KRTAP3-2Q9BYR7 98 aa3.07□□□□□ -1.92
ALMS1-207ENST00000614410 DNAH8Q96JB1 4490 aa3.07□□□□□ -1.92
ALMS1-207ENST00000614410 LORP23490 312 aaPredicted RBP3.05□□□□□ -1.92
ALMS1-207ENST00000614410 DNAH3Q8TD57 4116 aa3□□□□□ -1.93
ALMS1-207ENST00000614410 KRTAP8-1Q8IUC2 63 aa3□□□□□ -1.93
ALMS1-207ENST00000614410 PRKDCP78527 4128 aaKnown RBP2.99□□□□□ -1.93
ALMS1-207ENST00000614410 KRTAP4-5Q9BYR2 181 aa2.99□□□□□ -1.93
ALMS1-207ENST00000614410 DNAH9Q9NYC9 4486 aa2.98□□□□□ -1.93
ALMS1-207ENST00000614410 MT1HL1P0DM35 61 aa2.97□□□□□ -1.93
ALMS1-207ENST00000614410 DNAH7Q8WXX0 4024 aa2.95□□□□□ -1.94
ALMS1-207ENST00000614410 DNAH6Q9C0G6 4158 aa2.95□□□□□ -1.94
ALMS1-207ENST00000614410 DNAH11Q96DT5 4516 aa2.93□□□□□ -1.94
ALMS1-207ENST00000614410 KRTAP23-1A1A580 65 aa2.89□□□□□ -1.95
ALMS1-207ENST00000614410 DNAH17Q9UFH2 4485 aa2.87□□□□□ -1.95
ALMS1-207ENST00000614410 FAT2Q9NYQ8 4349 aa2.86□□□□□ -1.95
ALMS1-207ENST00000614410 HECTD4Q9Y4D8 3996 aa2.82□□□□□ -1.96
ALMS1-207ENST00000614410 KRTAP10-7P60409 375 aaPredicted RBP2.81□□□□□ -1.96
ALMS1-207ENST00000614410 VPS13DQ5THJ4 4388 aa2.8□□□□□ -1.96
ALMS1-207ENST00000614410 PKD1P98161 4303 aa2.79□□□□□ -1.96
ALMS1-207ENST00000614410 SPRR2FQ96RM1 72 aa2.78□□□□□ -1.96
ALMS1-207ENST00000614410 FLGP20930 4061 aaPredicted RBP2.78□□□□□ -1.96
ALMS1-207ENST00000614410 DYNC2H1Q8NCM8 4307 aaKnown RBP2.78□□□□□ -1.96
ALMS1-207ENST00000614410 KRTAP19-5Q3LI72 72 aa2.75□□□□□ -1.97
ALMS1-207ENST00000614410 KRTAP10-4P60372 401 aaPredicted RBP2.75□□□□□ -1.97
ALMS1-207ENST00000614410 APOBP04114 4563 aaKnown RBP2.74□□□□□ -1.97
ALMS1-207ENST00000614410 PLECQ15149 4684 aaKnown RBP2.73□□□□□ -1.97
ALMS1-207ENST00000614410 FAT1Q14517 4588 aa2.73□□□□□ -1.97
ALMS1-207ENST00000614410 SACSQ9NZJ4 4579 aa2.72□□□□□ -1.97
ALMS1-207ENST00000614410 FAT3Q8TDW7 4589 aa2.71□□□□□ -1.98
ALMS1-207ENST00000614410 LCE3CQ5T5A8 94 aa2.71□□□□□ -1.98
ALMS1-207ENST00000614410 LCE3BQ5TA77 95 aa2.7□□□□□ -1.98
ALMS1-207ENST00000614410 KRTAP4-1Q9BYQ7 146 aa2.7□□□□□ -1.98
ALMS1-207ENST00000614410 MT1HP80294 61 aa2.69□□□□□ -1.98
ALMS1-207ENST00000614410 LRP1BQ9NZR2 4599 aa2.68□□□□□ -1.98
ALMS1-207ENST00000614410 LRP1Q07954 4544 aaKnown RBP2.67□□□□□ -1.98
ALMS1-207ENST00000614410 PKHD1P08F94 4074 aa2.65□□□□□ -1.99
ALMS1-207ENST00000614410 STARD9Q9P2P6 4700 aa2.65□□□□□ -1.99
ALMS1-207ENST00000614410 LPAP08519 4548 aa2.62□□□□□ -1.99
ALMS1-207ENST00000614410 SPRR2EP22531 72 aa2.62□□□□□ -1.99
ALMS1-207ENST00000614410 SPRR2BP35325 72 aa2.62□□□□□ -1.99
ALMS1-207ENST00000614410 SPRR2AP35326 72 aa2.62□□□□□ -1.99
ALMS1-207ENST00000614410 SPRR2GQ9BYE4 73 aa2.62□□□□□ -1.99
ALMS1-207ENST00000614410 MT2AP02795 61 aa2.61□□□□□ -1.99
ALMS1-207ENST00000614410 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
ALMS1-207ENST00000614410 PKHD1L1Q86WI1 4243 aa2.6□□□□□ -1.99
ALMS1-207ENST00000614410 DNAH5Q8TE73 4624 aa2.6□□□□□ -1.99
ALMS1-207ENST00000614410 MT1FP04733 61 aa2.58□□□□□ -2
ALMS1-207ENST00000614410 MYCBP2O75592 4640 aa2.58□□□□□ -2
ALMS1-207ENST00000614410 MT1GP13640 62 aa2.58□□□□□ -2
ALMS1-207ENST00000614410 TNXBP22105 4242 aa2.57□□□□□ -2
ALMS1-207ENST00000614410 DYNC1H1Q14204 4646 aaKnown RBP2.54□□□□□ -2
ALMS1-207ENST00000614410 LCE2BO14633 110 aa2.5□□□□□ -2.01
ALMS1-207ENST00000614410 SPRR2DP22532 72 aa2.5□□□□□ -2.01
ALMS1-207ENST00000614410 KRTAP4-8A0A0G2JLE6 195 aa2.47□□□□□ -2.01
ALMS1-207ENST00000614410 KRTAP4-8Q9BYQ9 185 aa2.47□□□□□ -2.01
ALMS1-207ENST00000614410 LCE3DQ9BYE3 92 aa2.47□□□□□ -2.01
ALMS1-207ENST00000614410 HSPG2P98160 4391 aa2.47□□□□□ -2.01
ALMS1-207ENST00000614410 SYNE2Q8WXH0 6885 aaKnown RBP2.41□□□□□ -2.02
ALMS1-207ENST00000614410 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
ALMS1-207ENST00000614410 KRTAP19-1Q8IUB9 90 aa2.38□□□□□ -2.03
ALMS1-207ENST00000614410 LCE2CQ5TA81 110 aa2.38□□□□□ -2.03
ALMS1-207ENST00000614410 MT1XP80297 61 aa2.37□□□□□ -2.03
ALMS1-207ENST00000614410 KRTAP4-7Q9BYR0 210 aa2.35□□□□□ -2.03
ALMS1-207ENST00000614410 LCE2DQ5TA82 110 aaPredicted RBP2.34□□□□□ -2.03
ALMS1-207ENST00000614410 MT4P47944 62 aa2.34□□□□□ -2.03
ALMS1-207ENST00000614410 PRM1P04553 51 aa2.34□□□□□ -2.04
ALMS1-207ENST00000614410 KRTAP19-4Q3LI73 84 aa2.32□□□□□ -2.04
ALMS1-207ENST00000614410 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
ALMS1-207ENST00000614410 LRP2P98164 4655 aa2.32□□□□□ -2.04
ALMS1-207ENST00000614410 KRTAP19-8Q3LI54 63 aa2.31□□□□□ -2.04
ALMS1-207ENST00000614410 SPRR5A0A1B0GTR4 108 aa2.28□□□□□ -2.04
ALMS1-207ENST00000614410 KRTAP9-8Q9BYQ0 159 aa2.28□□□□□ -2.04
ALMS1-207ENST00000614410 MT1BP07438 61 aa2.27□□□□□ -2.05
ALMS1-207ENST00000614410 LCE1DQ5T752 114 aa2.27□□□□□ -2.05
ALMS1-207ENST00000614410 LOC100996750A0A140TA64 210 aa2.27□□□□□ -2.05
ALMS1-207ENST00000614410 MUC17Q685J3 4493 aa2.24□□□□□ -2.05
ALMS1-207ENST00000614410 KRTAP19-3Q7Z4W3 81 aa2.22□□□□□ -2.05
ALMS1-207ENST00000614410 MT1LQ93083 61 aa2.21□□□□□ -2.06
ALMS1-207ENST00000614410 KRTAP4-3Q9BYR4 195 aa2.21□□□□□ -2.06
ALMS1-207ENST00000614410 KRTAP17-1Q9BYP8 105 aa2.19□□□□□ -2.06
ALMS1-207ENST00000614410 LCE5AQ5TCM9 118 aa2.17□□□□□ -2.06
ALMS1-207ENST00000614410 KRTAP9-3Q9BYQ3 159 aa2.17□□□□□ -2.06
ALMS1-207ENST00000614410 KRTAP4-9Q9BYQ8 210 aa2.17□□□□□ -2.06
ALMS1-207ENST00000614410 MT3P25713 68 aa2.17□□□□□ -2.06
ALMS1-207ENST00000614410 RYR1P21817 5038 aa2.15□□□□□ -2.07
ALMS1-207ENST00000614410 MT1EP04732 61 aa2.14□□□□□ -2.07
ALMS1-207ENST00000614410 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
ALMS1-207ENST00000614410 DNHD1Q96M86 4753 aa2.13□□□□□ -2.07
ALMS1-207ENST00000614410 DSTQ03001 7570 aaKnown RBP2.09□□□□□ -2.08
ALMS1-207ENST00000614410 MT1MQ8N339 61 aa2.08□□□□□ -2.08
ALMS1-207ENST00000614410 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
ALMS1-207ENST00000614410 LCE1EQ5T753 118 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms