RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 TRRAPQ9Y4A5 3859 aa2.75□□□□□ -1.97
CCL16-206ENST00000613642 NOTCH1P46531 2555 aa2.75□□□□□ -1.97
CCL16-206ENST00000613642 MGAM2Q2M2H8 2515 aa2.75□□□□□ -1.97
CCL16-206ENST00000613642 TENM1Q9UKZ4 2725 aa2.74□□□□□ -1.97
CCL16-206ENST00000613642 KRTAP10-8P60410 259 aa2.74□□□□□ -1.97
CCL16-206ENST00000613642 APLNQ9ULZ1 77 aa2.74□□□□□ -1.97
CCL16-206ENST00000613642 FLG2Q5D862 2391 aaPredicted RBP2.74□□□□□ -1.97
CCL16-206ENST00000613642 ROS1P08922 2347 aa2.74□□□□□ -1.97
CCL16-206ENST00000613642 A0A096LPF7 62 aa2.73□□□□□ -1.97
CCL16-206ENST00000613642 KRTAP7-1Q8IUC3 87 aa2.72□□□□□ -1.97
CCL16-206ENST00000613642 VWFP04275 2813 aa2.71□□□□□ -1.98
CCL16-206ENST00000613642 NBEAL2Q6ZNJ1 2754 aa2.71□□□□□ -1.98
CCL16-206ENST00000613642 SPRR5A0A1B0GTR4 108 aa2.71□□□□□ -1.98
CCL16-206ENST00000613642 PRKDCP78527 4128 aaKnown RBP2.71□□□□□ -1.98
CCL16-206ENST00000613642 H3BNG1 76 aa2.7□□□□□ -1.98
CCL16-206ENST00000613642 A0A096LNI7 61 aa2.67□□□□□ -1.98
CCL16-206ENST00000613642 LINC01556Q5JQF7 62 aa2.67□□□□□ -1.98
CCL16-206ENST00000613642 KMT2CQ8NEZ4 4911 aaKnown RBP2.66□□□□□ -1.98
CCL16-206ENST00000613642 A0A0D9SG42 100 aa2.66□□□□□ -1.98
CCL16-206ENST00000613642 SPINK6Q6UWN8 80 aa2.65□□□□□ -1.99
CCL16-206ENST00000613642 KRTAP13-1Q8IUC0 172 aa2.65□□□□□ -1.99
CCL16-206ENST00000613642 CMYA5Q8N3K9 4069 aa2.64□□□□□ -1.99
CCL16-206ENST00000613642 A0A1B0GVY2 172 aa2.64□□□□□ -1.99
CCL16-206ENST00000613642 RYR3Q15413 4870 aa2.63□□□□□ -1.99
CCL16-206ENST00000613642 SPART-AS1P0CW21 52 aa2.62□□□□□ -1.99
CCL16-206ENST00000613642 KRTAP12-1P59990 96 aa2.62□□□□□ -1.99
CCL16-206ENST00000613642 KRTAP10-3P60369 221 aa2.62□□□□□ -1.99
CCL16-206ENST00000613642 Q5VSD8 79 aa2.62□□□□□ -1.99
CCL16-206ENST00000613642 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
CCL16-206ENST00000613642 KRTAP13-4Q3LI77 160 aa2.61□□□□□ -1.99
CCL16-206ENST00000613642 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
CCL16-206ENST00000613642 COL7A1Q02388 2944 aa2.61□□□□□ -1.99
CCL16-206ENST00000613642 TENM3Q9P273 2699 aa2.6□□□□□ -1.99
CCL16-206ENST00000613642 M0QZ58 72 aa2.59□□□□□ -1.99
CCL16-206ENST00000613642 KRTAP13-2Q52LG2 175 aa2.58□□□□□ -2
CCL16-206ENST00000613642 TENM2Q9NT68 2774 aa2.58□□□□□ -2
CCL16-206ENST00000613642 KRTAP4-3Q9BYR4 195 aa2.54□□□□□ -2
CCL16-206ENST00000613642 EPPK1P58107 5090 aaKnown RBP2.54□□□□□ -2
CCL16-206ENST00000613642 CSMD3Q7Z407 3707 aa2.54□□□□□ -2
CCL16-206ENST00000613642 BIRC6Q9NR09 4857 aa2.53□□□□□ -2
CCL16-206ENST00000613642 HTN3P15516 51 aa2.53□□□□□ -2
CCL16-206ENST00000613642 LYSTQ99698 3801 aa2.52□□□□□ -2.01
CCL16-206ENST00000613642 DNAH3Q8TD57 4116 aa2.52□□□□□ -2.01
CCL16-206ENST00000613642 DNAH9Q9NYC9 4486 aa2.52□□□□□ -2.01
CCL16-206ENST00000613642 DNAH1Q9P2D7 4330 aa2.5□□□□□ -2.01
CCL16-206ENST00000613642 DYNC2H1Q8NCM8 4307 aaKnown RBP2.5□□□□□ -2.01
CCL16-206ENST00000613642 SACSQ9NZJ4 4579 aa2.49□□□□□ -2.01
CCL16-206ENST00000613642 RYR2Q92736 4967 aa2.48□□□□□ -2.01
CCL16-206ENST00000613642 DNAH7Q8WXX0 4024 aa2.47□□□□□ -2.01
CCL16-206ENST00000613642 STAB2Q8WWQ8 2551 aa2.46□□□□□ -2.02
CCL16-206ENST00000613642 FRAS1Q86XX4 4008 aa2.45□□□□□ -2.02
CCL16-206ENST00000613642 PCLOQ9Y6V0 5065 aa2.45□□□□□ -2.02
CCL16-206ENST00000613642 VPS13DQ5THJ4 4388 aa2.45□□□□□ -2.02
CCL16-206ENST00000613642 HYDINQ4G0P3 5121 aa2.45□□□□□ -2.02
CCL16-206ENST00000613642 DEFB135Q30KP9 77 aa2.45□□□□□ -2.02
CCL16-206ENST00000613642 HUWE1Q7Z6Z7 4374 aaKnown RBP2.44□□□□□ -2.02
CCL16-206ENST00000613642 KRTAP5-2Q701N4 177 aa2.43□□□□□ -2.02
CCL16-206ENST00000613642 STARD9Q9P2P6 4700 aa2.42□□□□□ -2.02
CCL16-206ENST00000613642 DEFB4AO15263 64 aa2.42□□□□□ -2.02
CCL16-206ENST00000613642 LCE3AQ5TA76 89 aa2.41□□□□□ -2.02
CCL16-206ENST00000613642 HERC2O95714 4834 aa2.41□□□□□ -2.02
CCL16-206ENST00000613642 HECTD4Q9Y4D8 3996 aa2.4□□□□□ -2.03
CCL16-206ENST00000613642 RYR1P21817 5038 aa2.39□□□□□ -2.03
CCL16-206ENST00000613642 RPS29P62273 56 aaKnown RBP2.39□□□□□ -2.03
CCL16-206ENST00000613642 KMT2AQ03164 3969 aa2.38□□□□□ -2.03
CCL16-206ENST00000613642 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
CCL16-206ENST00000613642 KIAA1109Q2LD37 5005 aa2.34□□□□□ -2.03
CCL16-206ENST00000613642 PKHD1P08F94 4074 aa2.34□□□□□ -2.04
CCL16-206ENST00000613642 PLECQ15149 4684 aaKnown RBP2.33□□□□□ -2.04
CCL16-206ENST00000613642 KRTAP10-10P60014 251 aa2.32□□□□□ -2.04
CCL16-206ENST00000613642 DNAH10Q8IVF4 4471 aa2.32□□□□□ -2.04
CCL16-206ENST00000613642 TNP1P09430 55 aa2.31□□□□□ -2.04
CCL16-206ENST00000613642 KRTAP1-4P0C5Y4 121 aa2.3□□□□□ -2.04
CCL16-206ENST00000613642 HSPG2P98160 4391 aa2.29□□□□□ -2.04
CCL16-206ENST00000613642 FAT2Q9NYQ8 4349 aa2.28□□□□□ -2.04
CCL16-206ENST00000613642 ABCA13Q86UQ4 5058 aa2.28□□□□□ -2.04
CCL16-206ENST00000613642 PKD1P98161 4303 aa2.28□□□□□ -2.04
CCL16-206ENST00000613642 DNAH2Q9P225 4427 aa2.28□□□□□ -2.05
CCL16-206ENST00000613642 HERC1Q15751 4861 aa2.27□□□□□ -2.05
CCL16-206ENST00000613642 DNAH6Q9C0G6 4158 aa2.27□□□□□ -2.05
CCL16-206ENST00000613642 DMBT1Q9UGM3 2413 aaPredicted RBP2.27□□□□□ -2.05
CCL16-206ENST00000613642 KRTAP10-1P60331 282 aa2.27□□□□□ -2.05
CCL16-206ENST00000613642 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
CCL16-206ENST00000613642 DNAH11Q96DT5 4516 aa2.24□□□□□ -2.05
CCL16-206ENST00000613642 DYNC1H1Q14204 4646 aaKnown RBP2.24□□□□□ -2.05
CCL16-206ENST00000613642 MYCBP2O75592 4640 aa2.23□□□□□ -2.05
CCL16-206ENST00000613642 DNAH17Q9UFH2 4485 aa2.22□□□□□ -2.05
CCL16-206ENST00000613642 C9orf92A6NGG3 77 aa2.22□□□□□ -2.05
CCL16-206ENST00000613642 SRRM2Q9UQ35 2752 aaKnown RBP2.22□□□□□ -2.05
CCL16-206ENST00000613642 SMR3BP02814 79 aaPredicted RBP2.21□□□□□ -2.06
CCL16-206ENST00000613642 UBR4Q5T4S7 5183 aa2.2□□□□□ -2.06
CCL16-206ENST00000613642 LRP1BQ9NZR2 4599 aa2.19□□□□□ -2.06
CCL16-206ENST00000613642 APOBP04114 4563 aaKnown RBP2.19□□□□□ -2.06
CCL16-206ENST00000613642 VPS13BQ7Z7G8 4022 aa2.17□□□□□ -2.06
CCL16-206ENST00000613642 DNAH5Q8TE73 4624 aa2.15□□□□□ -2.07
CCL16-206ENST00000613642 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
CCL16-206ENST00000613642 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
CCL16-206ENST00000613642 DNAH8Q96JB1 4490 aa2.13□□□□□ -2.07
CCL16-206ENST00000613642 FAT1Q14517 4588 aa2.12□□□□□ -2.07
CCL16-206ENST00000613642 HMCN2Q8NDA2 5059 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms