RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 DNAH11Q96DT5 4516 aa3.94□□□□□ -1.78
TMCO1-208ENST00000612311 DNAH1Q9P2D7 4330 aa3.93□□□□□ -1.78
TMCO1-208ENST00000612311 VPS13DQ5THJ4 4388 aa3.88□□□□□ -1.79
TMCO1-208ENST00000612311 ALMS1Q8TCU4 4167 aa3.88□□□□□ -1.79
TMCO1-208ENST00000612311 DNAH10Q8IVF4 4471 aa3.86□□□□□ -1.79
TMCO1-208ENST00000612311 DNAH17Q9UFH2 4485 aa3.85□□□□□ -1.79
TMCO1-208ENST00000612311 STARD9Q9P2P6 4700 aa3.82□□□□□ -1.8
TMCO1-208ENST00000612311 FAT1Q14517 4588 aa3.82□□□□□ -1.8
TMCO1-208ENST00000612311 DYNC1H1Q14204 4646 aaKnown RBP3.82□□□□□ -1.8
TMCO1-208ENST00000612311 LORP23490 312 aaPredicted RBP3.79□□□□□ -1.8
TMCO1-208ENST00000612311 LRP1BQ9NZR2 4599 aa3.78□□□□□ -1.8
TMCO1-208ENST00000612311 PRKDCP78527 4128 aaKnown RBP3.76□□□□□ -1.81
TMCO1-208ENST00000612311 KRTAP15-1Q3LI76 137 aa3.76□□□□□ -1.81
TMCO1-208ENST00000612311 DNAH2Q9P225 4427 aa3.75□□□□□ -1.81
TMCO1-208ENST00000612311 RYR1P21817 5038 aa3.73□□□□□ -1.81
TMCO1-208ENST00000612311 KRTAP4-1Q9BYQ7 146 aa3.72□□□□□ -1.81
TMCO1-208ENST00000612311 DNAH8Q96JB1 4490 aa3.71□□□□□ -1.82
TMCO1-208ENST00000612311 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
TMCO1-208ENST00000612311 DYNC2H1Q8NCM8 4307 aaKnown RBP3.68□□□□□ -1.82
TMCO1-208ENST00000612311 SACSQ9NZJ4 4579 aa3.67□□□□□ -1.82
TMCO1-208ENST00000612311 KIAA1109Q2LD37 5005 aa3.67□□□□□ -1.82
TMCO1-208ENST00000612311 DNAH3Q8TD57 4116 aa3.65□□□□□ -1.82
TMCO1-208ENST00000612311 KMT2AQ03164 3969 aa3.65□□□□□ -1.82
TMCO1-208ENST00000612311 KRTAP23-1A1A580 65 aa3.65□□□□□ -1.82
TMCO1-208ENST00000612311 FAT2Q9NYQ8 4349 aa3.65□□□□□ -1.83
TMCO1-208ENST00000612311 ANK2Q01484 3957 aa3.64□□□□□ -1.83
TMCO1-208ENST00000612311 MYCBP2O75592 4640 aa3.62□□□□□ -1.83
TMCO1-208ENST00000612311 KRTAP12-3P60328 96 aa3.62□□□□□ -1.83
TMCO1-208ENST00000612311 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
TMCO1-208ENST00000612311 LYSTQ99698 3801 aa3.6□□□□□ -1.83
TMCO1-208ENST00000612311 APOBP04114 4563 aaKnown RBP3.59□□□□□ -1.83
TMCO1-208ENST00000612311 VPS13BQ7Z7G8 4022 aa3.58□□□□□ -1.84
TMCO1-208ENST00000612311 RYR3Q15413 4870 aa3.57□□□□□ -1.84
TMCO1-208ENST00000612311 KRTAP17-1Q9BYP8 105 aa3.57□□□□□ -1.84
TMCO1-208ENST00000612311 MT1HP80294 61 aa3.55□□□□□ -1.84
TMCO1-208ENST00000612311 LRP1Q07954 4544 aaKnown RBP3.53□□□□□ -1.84
TMCO1-208ENST00000612311 MT2AP02795 61 aa3.52□□□□□ -1.85
TMCO1-208ENST00000612311 SPRR2GQ9BYE4 73 aa3.52□□□□□ -1.85
TMCO1-208ENST00000612311 FAT3Q8TDW7 4589 aa3.48□□□□□ -1.85
TMCO1-208ENST00000612311 CMYA5Q8N3K9 4069 aa3.48□□□□□ -1.85
TMCO1-208ENST00000612311 DNAH6Q9C0G6 4158 aa3.47□□□□□ -1.85
TMCO1-208ENST00000612311 RYR2Q92736 4967 aa3.47□□□□□ -1.85
TMCO1-208ENST00000612311 INE1O15225 51 aa3.46□□□□□ -1.85
TMCO1-208ENST00000612311 MT1FP04733 61 aa3.46□□□□□ -1.85
TMCO1-208ENST00000612311 HECTD4Q9Y4D8 3996 aa3.44□□□□□ -1.86
TMCO1-208ENST00000612311 FRAS1Q86XX4 4008 aa3.44□□□□□ -1.86
TMCO1-208ENST00000612311 CRCT1Q9UGL9 99 aa3.43□□□□□ -1.86
TMCO1-208ENST00000612311 DNAH7Q8WXX0 4024 aa3.42□□□□□ -1.86
TMCO1-208ENST00000612311 HYDINQ4G0P3 5121 aa3.4□□□□□ -1.86
TMCO1-208ENST00000612311 HERC2O95714 4834 aa3.4□□□□□ -1.87
TMCO1-208ENST00000612311 LRP2P98164 4655 aa3.39□□□□□ -1.87
TMCO1-208ENST00000612311 KRTAP19-1Q8IUB9 90 aa3.36□□□□□ -1.87
TMCO1-208ENST00000612311 LOC100996750A0A140TA64 210 aa3.36□□□□□ -1.87
TMCO1-208ENST00000612311 KRTAP4-6Q9BYQ5 205 aa3.36□□□□□ -1.87
TMCO1-208ENST00000612311 KRTAP8-1Q8IUC2 63 aa3.36□□□□□ -1.87
TMCO1-208ENST00000612311 PKHD1P08F94 4074 aa3.35□□□□□ -1.87
TMCO1-208ENST00000612311 KRTAP19-8Q3LI54 63 aa3.31□□□□□ -1.88
TMCO1-208ENST00000612311 HSPG2P98160 4391 aa3.3□□□□□ -1.88
TMCO1-208ENST00000612311 KRTAP19-5Q3LI72 72 aa3.27□□□□□ -1.89
TMCO1-208ENST00000612311 BIRC6Q9NR09 4857 aa3.26□□□□□ -1.89
TMCO1-208ENST00000612311 LCE2CQ5TA81 110 aa3.26□□□□□ -1.89
TMCO1-208ENST00000612311 KMT2CQ8NEZ4 4911 aaKnown RBP3.26□□□□□ -1.89
TMCO1-208ENST00000612311 LCE2BO14633 110 aa3.25□□□□□ -1.89
TMCO1-208ENST00000612311 KRTAP9-8Q9BYQ0 159 aa3.24□□□□□ -1.89
TMCO1-208ENST00000612311 PKD1P98161 4303 aa3.24□□□□□ -1.89
TMCO1-208ENST00000612311 MT1BP07438 61 aa3.22□□□□□ -1.89
TMCO1-208ENST00000612311 KRTAP10-7P60409 375 aaPredicted RBP3.22□□□□□ -1.89
TMCO1-208ENST00000612311 PCLOQ9Y6V0 5065 aa3.21□□□□□ -1.89
TMCO1-208ENST00000612311 MT1XP80297 61 aa3.21□□□□□ -1.9
TMCO1-208ENST00000612311 HERC1Q15751 4861 aa3.21□□□□□ -1.9
TMCO1-208ENST00000612311 KRTAP10-5P60370 271 aa3.2□□□□□ -1.9
TMCO1-208ENST00000612311 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
TMCO1-208ENST00000612311 KRTAP19-2Q3LHN2 52 aa3.18□□□□□ -1.9
TMCO1-208ENST00000612311 LPAP08519 4548 aa3.16□□□□□ -1.9
TMCO1-208ENST00000612311 KRTAP9-3Q9BYQ3 159 aa3.14□□□□□ -1.91
TMCO1-208ENST00000612311 KRTAP19-4Q3LI73 84 aa3.14□□□□□ -1.91
TMCO1-208ENST00000612311 SPRR2FQ96RM1 72 aa3.13□□□□□ -1.91
TMCO1-208ENST00000612311 MUC17Q685J3 4493 aa3.11□□□□□ -1.91
TMCO1-208ENST00000612311 ABCA13Q86UQ4 5058 aa3.1□□□□□ -1.91
TMCO1-208ENST00000612311 EPPK1P58107 5090 aaKnown RBP3.09□□□□□ -1.91
TMCO1-208ENST00000612311 TNXBP22105 4242 aa3.09□□□□□ -1.92
TMCO1-208ENST00000612311 PKHD1L1Q86WI1 4243 aa3.08□□□□□ -1.92
TMCO1-208ENST00000612311 SPRR5A0A1B0GTR4 108 aa3.08□□□□□ -1.92
TMCO1-208ENST00000612311 KRTAP4-8A0A0G2JLE6 195 aa3.06□□□□□ -1.92
TMCO1-208ENST00000612311 LCE2AQ5TA79 106 aaPredicted RBP3.06□□□□□ -1.92
TMCO1-208ENST00000612311 KRTAP4-8Q9BYQ9 185 aa3.06□□□□□ -1.92
TMCO1-208ENST00000612311 FLGP20930 4061 aaPredicted RBP3.02□□□□□ -1.93
TMCO1-208ENST00000612311 UBR4Q5T4S7 5183 aa2.94□□□□□ -1.94
TMCO1-208ENST00000612311 FAT4Q6V0I7 4981 aa2.94□□□□□ -1.94
TMCO1-208ENST00000612311 MT1GP13640 62 aa2.94□□□□□ -1.94
TMCO1-208ENST00000612311 RNF213Q63HN8 5207 aa2.93□□□□□ -1.94
TMCO1-208ENST00000612311 SYNE1Q8NF91 8797 aaKnown RBP2.92□□□□□ -1.94
TMCO1-208ENST00000612311 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.89□□□□□ -1.95
TMCO1-208ENST00000612311 SPRR2EP22531 72 aa2.89□□□□□ -1.95
TMCO1-208ENST00000612311 SPRR2BP35325 72 aa2.89□□□□□ -1.95
TMCO1-208ENST00000612311 SPRR2AP35326 72 aa2.89□□□□□ -1.95
TMCO1-208ENST00000612311 HMCN2Q8NDA2 5059 aa2.88□□□□□ -1.95
TMCO1-208ENST00000612311 MT1LQ93083 61 aa2.88□□□□□ -1.95
TMCO1-208ENST00000612311 KRTAP4-7Q9BYR0 210 aa2.88□□□□□ -1.95
TMCO1-208ENST00000612311 LCE3BQ5TA77 95 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms