RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 ZNF469Q96JG9 3925 aaPredicted RBP8.41□□□□□ -1.06
COL15A1-205ENST00000610452 KRTAP4-5Q9BYR2 181 aa8.28□□□□□ -1.08
COL15A1-205ENST00000610452 KRTAP10-5P60370 271 aa8.27□□□□□ -1.09
COL15A1-205ENST00000610452 DNAH5Q8TE73 4624 aa8.19□□□□□ -1.1
COL15A1-205ENST00000610452 AKAP9Q99996 3911 aa8.17□□□□□ -1.1
COL15A1-205ENST00000610452 DNAH9Q9NYC9 4486 aa8.15□□□□□ -1.11
COL15A1-205ENST00000610452 DNAH1Q9P2D7 4330 aa8.12□□□□□ -1.11
COL15A1-205ENST00000610452 DNAH11Q96DT5 4516 aa8.11□□□□□ -1.11
COL15A1-205ENST00000610452 DNAH10Q8IVF4 4471 aa8.1□□□□□ -1.11
COL15A1-205ENST00000610452 ALMS1Q8TCU4 4167 aa8.09□□□□□ -1.12
COL15A1-205ENST00000610452 PLECQ15149 4684 aaKnown RBP8.06□□□□□ -1.12
COL15A1-205ENST00000610452 FAT1Q14517 4588 aa7.93□□□□□ -1.14
COL15A1-205ENST00000610452 DNAH17Q9UFH2 4485 aa7.91□□□□□ -1.14
COL15A1-205ENST00000610452 DNAH2Q9P225 4427 aa7.9□□□□□ -1.14
COL15A1-205ENST00000610452 KRTAP4-1Q9BYQ7 146 aa7.89□□□□□ -1.15
COL15A1-205ENST00000610452 DNAH8Q96JB1 4490 aa7.88□□□□□ -1.15
COL15A1-205ENST00000610452 VPS13DQ5THJ4 4388 aa7.84□□□□□ -1.15
COL15A1-205ENST00000610452 DYNC1H1Q14204 4646 aaKnown RBP7.73□□□□□ -1.17
COL15A1-205ENST00000610452 LRP1BQ9NZR2 4599 aa7.72□□□□□ -1.17
COL15A1-205ENST00000610452 KRTAP8-1Q8IUC2 63 aa7.72□□□□□ -1.17
COL15A1-205ENST00000610452 LCE3CQ5T5A8 94 aa7.69□□□□□ -1.18
COL15A1-205ENST00000610452 SPRR2GQ9BYE4 73 aa7.67□□□□□ -1.18
COL15A1-205ENST00000610452 DNHD1Q96M86 4753 aa7.66□□□□□ -1.18
COL15A1-205ENST00000610452 STARD9Q9P2P6 4700 aa7.64□□□□□ -1.19
COL15A1-205ENST00000610452 SACSQ9NZJ4 4579 aa7.62□□□□□ -1.19
COL15A1-205ENST00000610452 KRTAP19-5Q3LI72 72 aa7.58□□□□□ -1.2
COL15A1-205ENST00000610452 SPRR5A0A1B0GTR4 108 aa7.57□□□□□ -1.2
COL15A1-205ENST00000610452 MT2AP02795 61 aa7.56□□□□□ -1.2
COL15A1-205ENST00000610452 MT1HP80294 61 aa7.55□□□□□ -1.2
COL15A1-205ENST00000610452 RYR1P21817 5038 aa7.54□□□□□ -1.2
COL15A1-205ENST00000610452 DNAH3Q8TD57 4116 aa7.53□□□□□ -1.2
COL15A1-205ENST00000610452 ANK2Q01484 3957 aa7.51□□□□□ -1.21
COL15A1-205ENST00000610452 DYNC2H1Q8NCM8 4307 aaKnown RBP7.49□□□□□ -1.21
COL15A1-205ENST00000610452 APOBP04114 4563 aaKnown RBP7.49□□□□□ -1.21
COL15A1-205ENST00000610452 MYCBP2O75592 4640 aa7.45□□□□□ -1.22
COL15A1-205ENST00000610452 MT1FP04733 61 aa7.43□□□□□ -1.22
COL15A1-205ENST00000610452 FAT2Q9NYQ8 4349 aa7.42□□□□□ -1.22
COL15A1-205ENST00000610452 VPS13BQ7Z7G8 4022 aa7.39□□□□□ -1.23
COL15A1-205ENST00000610452 KMT2AQ03164 3969 aa7.35□□□□□ -1.23
COL15A1-205ENST00000610452 KRTAP19-4Q3LI73 84 aa7.33□□□□□ -1.24
COL15A1-205ENST00000610452 KRTAP12-4P60329 112 aa7.32□□□□□ -1.24
COL15A1-205ENST00000610452 LYSTQ99698 3801 aa7.3□□□□□ -1.24
COL15A1-205ENST00000610452 PRKDCP78527 4128 aaKnown RBP7.27□□□□□ -1.25
COL15A1-205ENST00000610452 FRAS1Q86XX4 4008 aa7.22□□□□□ -1.25
COL15A1-205ENST00000610452 KRTAP19-1Q8IUB9 90 aa7.21□□□□□ -1.26
COL15A1-205ENST00000610452 KRTAP10-7P60409 375 aaPredicted RBP7.17□□□□□ -1.26
COL15A1-205ENST00000610452 KIAA1109Q2LD37 5005 aa7.15□□□□□ -1.26
COL15A1-205ENST00000610452 LRP1Q07954 4544 aaKnown RBP7.12□□□□□ -1.27
COL15A1-205ENST00000610452 KRTAP19-8Q3LI54 63 aa7.09□□□□□ -1.27
COL15A1-205ENST00000610452 FAT3Q8TDW7 4589 aa7.07□□□□□ -1.28
COL15A1-205ENST00000610452 KRTAP17-1Q9BYP8 105 aa7.07□□□□□ -1.28
COL15A1-205ENST00000610452 RYR3Q15413 4870 aa7.06□□□□□ -1.28
COL15A1-205ENST00000610452 CMYA5Q8N3K9 4069 aa7.04□□□□□ -1.28
COL15A1-205ENST00000610452 LCE3BQ5TA77 95 aa7.03□□□□□ -1.28
COL15A1-205ENST00000610452 DNAH6Q9C0G6 4158 aa7.03□□□□□ -1.28
COL15A1-205ENST00000610452 HECTD4Q9Y4D8 3996 aa7□□□□□ -1.29
COL15A1-205ENST00000610452 MT1XP80297 61 aa6.98□□□□□ -1.29
COL15A1-205ENST00000610452 DNAH7Q8WXX0 4024 aa6.97□□□□□ -1.29
COL15A1-205ENST00000610452 SPRR2FQ96RM1 72 aa6.94□□□□□ -1.3
COL15A1-205ENST00000610452 LRP2P98164 4655 aa6.88□□□□□ -1.31
COL15A1-205ENST00000610452 MT1BP07438 61 aa6.88□□□□□ -1.31
COL15A1-205ENST00000610452 RYR2Q92736 4967 aa6.88□□□□□ -1.31
COL15A1-205ENST00000610452 MT1GP13640 62 aa6.86□□□□□ -1.31
COL15A1-205ENST00000610452 LCE3DQ9BYE3 92 aa6.81□□□□□ -1.32
COL15A1-205ENST00000610452 KRTAP9-8Q9BYQ0 159 aa6.77□□□□□ -1.33
COL15A1-205ENST00000610452 LCE3EQ5T5B0 92 aa6.76□□□□□ -1.33
COL15A1-205ENST00000610452 HYDINQ4G0P3 5121 aa6.72□□□□□ -1.33
COL15A1-205ENST00000610452 KRTAP4-8A0A0G2JLE6 195 aa6.69□□□□□ -1.34
COL15A1-205ENST00000610452 KRTAP4-8Q9BYQ9 185 aa6.69□□□□□ -1.34
COL15A1-205ENST00000610452 LCE2CQ5TA81 110 aa6.68□□□□□ -1.34
COL15A1-205ENST00000610452 PKD1P98161 4303 aa6.6□□□□□ -1.35
COL15A1-205ENST00000610452 HERC2O95714 4834 aa6.59□□□□□ -1.35
COL15A1-205ENST00000610452 PKHD1P08F94 4074 aa6.59□□□□□ -1.35
COL15A1-205ENST00000610452 KRTAP9-3Q9BYQ3 159 aa6.58□□□□□ -1.36
COL15A1-205ENST00000610452 KRTAP4-7Q9BYR0 210 aa6.52□□□□□ -1.37
COL15A1-205ENST00000610452 HSPG2P98160 4391 aa6.51□□□□□ -1.37
COL15A1-205ENST00000610452 LPAP08519 4548 aa6.49□□□□□ -1.37
COL15A1-205ENST00000610452 KMT2CQ8NEZ4 4911 aaKnown RBP6.49□□□□□ -1.37
COL15A1-205ENST00000610452 PRM1P04553 51 aa6.48□□□□□ -1.37
COL15A1-205ENST00000610452 KRTAP19-2Q3LHN2 52 aa6.47□□□□□ -1.37
COL15A1-205ENST00000610452 MT1LQ93083 61 aa6.39□□□□□ -1.39
COL15A1-205ENST00000610452 PCLOQ9Y6V0 5065 aa6.39□□□□□ -1.39
COL15A1-205ENST00000610452 MUC17Q685J3 4493 aa6.39□□□□□ -1.39
COL15A1-205ENST00000610452 HERC1Q15751 4861 aa6.37□□□□□ -1.39
COL15A1-205ENST00000610452 SPRR2EP22531 72 aa6.33□□□□□ -1.4
COL15A1-205ENST00000610452 SPRR2BP35325 72 aa6.33□□□□□ -1.4
COL15A1-205ENST00000610452 SPRR2AP35326 72 aa6.33□□□□□ -1.4
COL15A1-205ENST00000610452 PKHD1L1Q86WI1 4243 aa6.26□□□□□ -1.41
COL15A1-205ENST00000610452 SYNE1Q8NF91 8797 aaKnown RBP6.25□□□□□ -1.41
COL15A1-205ENST00000610452 LCE2BO14633 110 aa6.25□□□□□ -1.41
COL15A1-205ENST00000610452 MT1EP04732 61 aa6.24□□□□□ -1.41
COL15A1-205ENST00000610452 FLGP20930 4061 aaPredicted RBP6.23□□□□□ -1.41
COL15A1-205ENST00000610452 TNXBP22105 4242 aa6.23□□□□□ -1.41
COL15A1-205ENST00000610452 KRTAP19-3Q7Z4W3 81 aa6.22□□□□□ -1.41
COL15A1-205ENST00000610452 KRTAP2-3P0C7H8 128 aa6.15□□□□□ -1.42
COL15A1-205ENST00000610452 KRTAP2-4Q9BYR9 128 aa6.15□□□□□ -1.42
COL15A1-205ENST00000610452 KRTAP2-1Q9BYU5 128 aa6.15□□□□□ -1.42
COL15A1-205ENST00000610452 BIRC6Q9NR09 4857 aa6.14□□□□□ -1.43
COL15A1-205ENST00000610452 ABCA13Q86UQ4 5058 aa6.1□□□□□ -1.43
COL15A1-205ENST00000610452 SPRR2DP22532 72 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms