RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 DNAH2Q9P225 4427 aa5.6□□□□□ -1.51
USP6NL-205ENST00000609104 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
USP6NL-205ENST00000609104 KRTAP10-5P60370 271 aa5.56□□□□□ -1.52
USP6NL-205ENST00000609104 FRAS1Q86XX4 4008 aa5.54□□□□□ -1.52
USP6NL-205ENST00000609104 KRTAP4-5Q9BYR2 181 aa5.52□□□□□ -1.53
USP6NL-205ENST00000609104 LORP23490 312 aaPredicted RBP5.51□□□□□ -1.53
USP6NL-205ENST00000609104 DNAH1Q9P2D7 4330 aa5.51□□□□□ -1.53
USP6NL-205ENST00000609104 DNAH3Q8TD57 4116 aa5.48□□□□□ -1.53
USP6NL-205ENST00000609104 DNAH9Q9NYC9 4486 aa5.43□□□□□ -1.54
USP6NL-205ENST00000609104 KRTAP10-4P60372 401 aaPredicted RBP5.42□□□□□ -1.54
USP6NL-205ENST00000609104 KRTAP8-1Q8IUC2 63 aa5.39□□□□□ -1.55
USP6NL-205ENST00000609104 ANK2Q01484 3957 aa5.39□□□□□ -1.55
USP6NL-205ENST00000609104 DNAH10Q8IVF4 4471 aa5.38□□□□□ -1.55
USP6NL-205ENST00000609104 VPS13BQ7Z7G8 4022 aa5.34□□□□□ -1.55
USP6NL-205ENST00000609104 KMT2AQ03164 3969 aa5.34□□□□□ -1.56
USP6NL-205ENST00000609104 DNAH8Q96JB1 4490 aa5.32□□□□□ -1.56
USP6NL-205ENST00000609104 CMYA5Q8N3K9 4069 aa5.31□□□□□ -1.56
USP6NL-205ENST00000609104 DNAH7Q8WXX0 4024 aa5.26□□□□□ -1.57
USP6NL-205ENST00000609104 LYSTQ99698 3801 aa5.25□□□□□ -1.57
USP6NL-205ENST00000609104 FAT2Q9NYQ8 4349 aa5.17□□□□□ -1.58
USP6NL-205ENST00000609104 DNAH11Q96DT5 4516 aa5.16□□□□□ -1.58
USP6NL-205ENST00000609104 DNAH6Q9C0G6 4158 aa5.15□□□□□ -1.59
USP6NL-205ENST00000609104 KRTAP4-1Q9BYQ7 146 aa5.09□□□□□ -1.6
USP6NL-205ENST00000609104 PLECQ15149 4684 aaKnown RBP5.08□□□□□ -1.6
USP6NL-205ENST00000609104 DYNC2H1Q8NCM8 4307 aaKnown RBP5.08□□□□□ -1.6
USP6NL-205ENST00000609104 VPS13DQ5THJ4 4388 aa5.07□□□□□ -1.6
USP6NL-205ENST00000609104 MT1HP80294 61 aa5.06□□□□□ -1.6
USP6NL-205ENST00000609104 PRKDCP78527 4128 aaKnown RBP5.06□□□□□ -1.6
USP6NL-205ENST00000609104 DNAH17Q9UFH2 4485 aa5.06□□□□□ -1.6
USP6NL-205ENST00000609104 KRTAP19-5Q3LI72 72 aa5.04□□□□□ -1.6
USP6NL-205ENST00000609104 HECTD4Q9Y4D8 3996 aa5.04□□□□□ -1.6
USP6NL-205ENST00000609104 KRTAP10-7P60409 375 aaPredicted RBP5.03□□□□□ -1.6
USP6NL-205ENST00000609104 SPRR2GQ9BYE4 73 aa5□□□□□ -1.61
USP6NL-205ENST00000609104 LCE3CQ5T5A8 94 aa4.99□□□□□ -1.61
USP6NL-205ENST00000609104 DNAH5Q8TE73 4624 aa4.98□□□□□ -1.61
USP6NL-205ENST00000609104 SPRR2FQ96RM1 72 aa4.98□□□□□ -1.61
USP6NL-205ENST00000609104 MT2AP02795 61 aa4.96□□□□□ -1.62
USP6NL-205ENST00000609104 STARD9Q9P2P6 4700 aa4.91□□□□□ -1.62
USP6NL-205ENST00000609104 LRP1BQ9NZR2 4599 aa4.91□□□□□ -1.62
USP6NL-205ENST00000609104 MT1FP04733 61 aa4.87□□□□□ -1.63
USP6NL-205ENST00000609104 FAT1Q14517 4588 aa4.86□□□□□ -1.63
USP6NL-205ENST00000609104 APOBP04114 4563 aaKnown RBP4.8□□□□□ -1.64
USP6NL-205ENST00000609104 LCE3BQ5TA77 95 aa4.77□□□□□ -1.65
USP6NL-205ENST00000609104 SACSQ9NZJ4 4579 aa4.71□□□□□ -1.66
USP6NL-205ENST00000609104 PKD1P98161 4303 aa4.71□□□□□ -1.66
USP6NL-205ENST00000609104 SPRR2EP22531 72 aa4.68□□□□□ -1.66
USP6NL-205ENST00000609104 SPRR2BP35325 72 aa4.68□□□□□ -1.66
USP6NL-205ENST00000609104 SPRR2AP35326 72 aa4.68□□□□□ -1.66
USP6NL-205ENST00000609104 FLGP20930 4061 aaPredicted RBP4.66□□□□□ -1.66
USP6NL-205ENST00000609104 KRTAP12-4P60329 112 aa4.65□□□□□ -1.67
USP6NL-205ENST00000609104 KRTAP19-4Q3LI73 84 aa4.63□□□□□ -1.67
USP6NL-205ENST00000609104 MT1GP13640 62 aa4.62□□□□□ -1.67
USP6NL-205ENST00000609104 DYNC1H1Q14204 4646 aaKnown RBP4.59□□□□□ -1.67
USP6NL-205ENST00000609104 FAT3Q8TDW7 4589 aa4.57□□□□□ -1.68
USP6NL-205ENST00000609104 PKHD1L1Q86WI1 4243 aa4.54□□□□□ -1.68
USP6NL-205ENST00000609104 KRTAP19-1Q8IUB9 90 aa4.54□□□□□ -1.68
USP6NL-205ENST00000609104 MT1XP80297 61 aa4.52□□□□□ -1.69
USP6NL-205ENST00000609104 SPRR2DP22532 72 aa4.51□□□□□ -1.69
USP6NL-205ENST00000609104 KRTAP19-8Q3LI54 63 aa4.51□□□□□ -1.69
USP6NL-205ENST00000609104 PKHD1P08F94 4074 aa4.51□□□□□ -1.69
USP6NL-205ENST00000609104 LCE2BO14633 110 aa4.51□□□□□ -1.69
USP6NL-205ENST00000609104 LRP1Q07954 4544 aaKnown RBP4.5□□□□□ -1.69
USP6NL-205ENST00000609104 MYCBP2O75592 4640 aa4.49□□□□□ -1.69
USP6NL-205ENST00000609104 KRTAP4-8A0A0G2JLE6 195 aa4.45□□□□□ -1.7
USP6NL-205ENST00000609104 KRTAP4-8Q9BYQ9 185 aa4.45□□□□□ -1.7
USP6NL-205ENST00000609104 LPAP08519 4548 aa4.44□□□□□ -1.7
USP6NL-205ENST00000609104 LCE3DQ9BYE3 92 aa4.44□□□□□ -1.7
USP6NL-205ENST00000609104 HSPG2P98160 4391 aa4.43□□□□□ -1.7
USP6NL-205ENST00000609104 TNXBP22105 4242 aa4.42□□□□□ -1.7
USP6NL-205ENST00000609104 MT1BP07438 61 aa4.37□□□□□ -1.71
USP6NL-205ENST00000609104 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.72
USP6NL-205ENST00000609104 KRTAP9-8Q9BYQ0 159 aa4.34□□□□□ -1.72
USP6NL-205ENST00000609104 SPRR5A0A1B0GTR4 108 aa4.33□□□□□ -1.72
USP6NL-205ENST00000609104 KRTAP17-1Q9BYP8 105 aa4.26□□□□□ -1.73
USP6NL-205ENST00000609104 RYR1P21817 5038 aa4.24□□□□□ -1.73
USP6NL-205ENST00000609104 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
USP6NL-205ENST00000609104 DNHD1Q96M86 4753 aa4.23□□□□□ -1.73
USP6NL-205ENST00000609104 LCE2CQ5TA81 110 aa4.21□□□□□ -1.74
USP6NL-205ENST00000609104 KRTAP9-3Q9BYQ3 159 aa4.21□□□□□ -1.74
USP6NL-205ENST00000609104 KRTAP19-3Q7Z4W3 81 aa4.17□□□□□ -1.74
USP6NL-205ENST00000609104 MT1LQ93083 61 aa4.15□□□□□ -1.74
USP6NL-205ENST00000609104 LCE2DQ5TA82 110 aaPredicted RBP4.15□□□□□ -1.74
USP6NL-205ENST00000609104 PRM1P04553 51 aa4.15□□□□□ -1.75
USP6NL-205ENST00000609104 LRP2P98164 4655 aa4.12□□□□□ -1.75
USP6NL-205ENST00000609104 MT4P47944 62 aa4.08□□□□□ -1.76
USP6NL-205ENST00000609104 MT1EP04732 61 aa4.07□□□□□ -1.76
USP6NL-205ENST00000609104 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
USP6NL-205ENST00000609104 LCE1BQ5T7P3 118 aa4□□□□□ -1.77
USP6NL-205ENST00000609104 MT3P25713 68 aa4□□□□□ -1.77
USP6NL-205ENST00000609104 RYR3Q15413 4870 aa3.98□□□□□ -1.77
USP6NL-205ENST00000609104 KRTAP4-3Q9BYR4 195 aa3.96□□□□□ -1.77
USP6NL-205ENST00000609104 MT1MQ8N339 61 aa3.96□□□□□ -1.78
USP6NL-205ENST00000609104 LCE1DQ5T752 114 aa3.95□□□□□ -1.78
USP6NL-205ENST00000609104 MUC17Q685J3 4493 aa3.91□□□□□ -1.78
USP6NL-205ENST00000609104 HYDINQ4G0P3 5121 aa3.85□□□□□ -1.79
USP6NL-205ENST00000609104 KRTAP4-9Q9BYQ8 210 aa3.82□□□□□ -1.8
USP6NL-205ENST00000609104 SYNE2Q8WXH0 6885 aaKnown RBP3.81□□□□□ -1.8
USP6NL-205ENST00000609104 KRTAP19-2Q3LHN2 52 aa3.8□□□□□ -1.8
USP6NL-205ENST00000609104 KMT2CQ8NEZ4 4911 aaKnown RBP3.78□□□□□ -1.81
USP6NL-205ENST00000609104 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms