RNA–Protein interactions for RNA: ENST00000604814.5

TUBE1-209, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-209ENST00000604814 NBEAL2Q6ZNJ1 2754 aa1.02□□□□□ -2.25
TUBE1-209ENST00000604814 TRIOO75962 3097 aa1.02□□□□□ -2.25
TUBE1-209ENST00000604814 CDH23Q9H251 3354 aa1.02□□□□□ -2.25
TUBE1-209ENST00000604814 FRYLO94915 3013 aa1.02□□□□□ -2.25
TUBE1-209ENST00000604814 DNAH8Q96JB1 4490 aa1.02□□□□□ -2.25
TUBE1-209ENST00000604814 SACSQ9NZJ4 4579 aa1.02□□□□□ -2.25
TUBE1-209ENST00000604814 LAMA1P25391 3075 aa1.02□□□□□ -2.25
TUBE1-209ENST00000604814 PRUNE2Q8WUY3 3088 aa1.02□□□□□ -2.25
TUBE1-209ENST00000604814 VPS13AQ96RL7 3174 aa1.02□□□□□ -2.25
TUBE1-209ENST00000604814 ITPR3Q14573 2671 aa1.01□□□□□ -2.25
TUBE1-209ENST00000604814 MACF1Q9UPN3 7388 aaKnown RBP1.01□□□□□ -2.25
TUBE1-209ENST00000604814 TLN1Q9Y490 2541 aaKnown RBP1.01□□□□□ -2.25
TUBE1-209ENST00000604814 TACC2O95359 2948 aa1.01□□□□□ -2.25
TUBE1-209ENST00000604814 UTP20O75691 2785 aaKnown RBP1.01□□□□□ -2.25
TUBE1-209ENST00000604814 MTORP42345 2549 aa1.01□□□□□ -2.25
TUBE1-209ENST00000604814 LAMA5O15230 3695 aa1□□□□□ -2.25
TUBE1-209ENST00000604814 SPEGQ15772 3267 aa1□□□□□ -2.25
TUBE1-209ENST00000604814 FREM2Q5SZK8 3169 aa1□□□□□ -2.25
TUBE1-209ENST00000604814 HUWE1Q7Z6Z7 4374 aaKnown RBP1□□□□□ -2.25
TUBE1-209ENST00000604814 DMXL2Q8TDJ6 3036 aa1□□□□□ -2.25
TUBE1-209ENST00000604814 WDFY3Q8IZQ1 3526 aa1□□□□□ -2.25
TUBE1-209ENST00000604814 SYNE1Q8NF91 8797 aaKnown RBP1□□□□□ -2.25
TUBE1-209ENST00000604814 AKAP9Q99996 3911 aa1□□□□□ -2.25
TUBE1-209ENST00000604814 SPG11Q96JI7 2443 aa1□□□□□ -2.25
TUBE1-209ENST00000604814 DMXL1Q9Y485 3027 aa1□□□□□ -2.25
TUBE1-209ENST00000604814 DCHS1Q96JQ0 3298 aa1□□□□□ -2.25
TUBE1-209ENST00000604814 KALRNO60229 2985 aa0.99□□□□□ -2.25
TUBE1-209ENST00000604814 WDFY4Q6ZS81 3184 aa0.99□□□□□ -2.25
TUBE1-209ENST00000604814 CUBNO60494 3623 aa0.99□□□□□ -2.25
TUBE1-209ENST00000604814 NCOR2Q9Y618 2525 aa0.99□□□□□ -2.25
TUBE1-209ENST00000604814 CELSR3Q9NYQ7 3312 aa0.99□□□□□ -2.25
TUBE1-209ENST00000604814 MYO15AQ9UKN7 3530 aa0.98□□□□□ -2.25
TUBE1-209ENST00000604814 DMDP11532 3685 aa0.98□□□□□ -2.25
TUBE1-209ENST00000604814 SPART-AS1P0CW21 52 aa0.98□□□□□ -2.25
TUBE1-209ENST00000604814 ANKRD11Q6UB99 2663 aaPredicted RBP0.98□□□□□ -2.25
TUBE1-209ENST00000604814 USP9XQ93008 2570 aaPredicted RBP0.98□□□□□ -2.25
TUBE1-209ENST00000604814 DEFB136Q30KP8 78 aa0.98□□□□□ -2.25
TUBE1-209ENST00000604814 ADGRG4Q8IZF6 3080 aa0.98□□□□□ -2.25
TUBE1-209ENST00000604814 BOD1L1Q8NFC6 3051 aa0.97□□□□□ -2.25
TUBE1-209ENST00000604814 MYO9AB2RTY4 2548 aa0.97□□□□□ -2.25
TUBE1-209ENST00000604814 LRBAP50851 2863 aa0.97□□□□□ -2.25
TUBE1-209ENST00000604814 A0A096LNI7 61 aa0.97□□□□□ -2.25
TUBE1-209ENST00000604814 SMG1Q96Q15 3661 aaKnown RBP0.97□□□□□ -2.25
TUBE1-209ENST00000604814 A0A096LPF7 62 aa0.96□□□□□ -2.26
TUBE1-209ENST00000604814 DYNC2H1Q8NCM8 4307 aaKnown RBP0.96□□□□□ -2.26
TUBE1-209ENST00000604814 TLN2Q9Y4G6 2542 aa0.96□□□□□ -2.26
TUBE1-209ENST00000604814 LOC400499M0QZD8 3231 aa0.96□□□□□ -2.26
TUBE1-209ENST00000604814 NSD1Q96L73 2696 aaPredicted RBP0.96□□□□□ -2.26
TUBE1-209ENST00000604814 STAB1Q9NY15 2570 aa0.96□□□□□ -2.26
TUBE1-209ENST00000604814 PKHD1L1Q86WI1 4243 aa0.96□□□□□ -2.26
TUBE1-209ENST00000604814 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
TUBE1-209ENST00000604814 LINC01556Q5JQF7 62 aa0.96□□□□□ -2.26
TUBE1-209ENST00000604814 COL7A1Q02388 2944 aa0.95□□□□□ -2.26
TUBE1-209ENST00000604814 DOPEY1Q5JWR5 2465 aa0.95□□□□□ -2.26
TUBE1-209ENST00000604814 CEP295Q9C0D2 2601 aa0.95□□□□□ -2.26
TUBE1-209ENST00000604814 HIVEP1P15822 2718 aa0.95□□□□□ -2.26
TUBE1-209ENST00000604814 ACACBO00763 2458 aa0.95□□□□□ -2.26
TUBE1-209ENST00000604814 ZANQ9Y493 2812 aa0.94□□□□□ -2.26
TUBE1-209ENST00000604814 CSMD1Q96PZ7 3565 aa0.94□□□□□ -2.26
TUBE1-209ENST00000604814 ITPR1Q14643 2758 aa0.94□□□□□ -2.26
TUBE1-209ENST00000604814 SPRR2DP22532 72 aa0.93□□□□□ -2.26
TUBE1-209ENST00000604814 DNAH3Q8TD57 4116 aa0.93□□□□□ -2.26
TUBE1-209ENST00000604814 HRNRQ86YZ3 2850 aaPredicted RBP0.93□□□□□ -2.26
TUBE1-209ENST00000604814 MAP1AP78559 2803 aaPredicted RBP0.93□□□□□ -2.26
TUBE1-209ENST00000604814 SONP18583 2426 aaKnown RBP0.93□□□□□ -2.26
TUBE1-209ENST00000604814 SVEP1Q4LDE5 3571 aa0.92□□□□□ -2.26
TUBE1-209ENST00000604814 EYSQ5T1H1 3165 aa0.92□□□□□ -2.26
TUBE1-209ENST00000604814 HECTD4Q9Y4D8 3996 aa0.91□□□□□ -2.26
TUBE1-209ENST00000604814 MXRA5Q9NR99 2828 aa0.91□□□□□ -2.26
TUBE1-209ENST00000604814 DEFB4AO15263 64 aa0.91□□□□□ -2.26
TUBE1-209ENST00000604814 HTN3P15516 51 aa0.91□□□□□ -2.26
TUBE1-209ENST00000604814 FLNBO75369 2602 aaKnown RBP0.91□□□□□ -2.26
TUBE1-209ENST00000604814 ANK3Q12955 4377 aaKnown RBP0.91□□□□□ -2.26
TUBE1-209ENST00000604814 ASPMQ8IZT6 3477 aa0.91□□□□□ -2.26
TUBE1-209ENST00000604814 DNAH2Q9P225 4427 aa0.9□□□□□ -2.26
TUBE1-209ENST00000604814 TEX15Q9BXT5 2789 aa0.9□□□□□ -2.26
TUBE1-209ENST00000604814 DNAH7Q8WXX0 4024 aa0.9□□□□□ -2.26
TUBE1-209ENST00000604814 MUC3AQ02505 3323 aa0.9□□□□□ -2.27
TUBE1-209ENST00000604814 LRP1Q07954 4544 aaKnown RBP0.9□□□□□ -2.27
TUBE1-209ENST00000604814 HSPG2P98160 4391 aa0.9□□□□□ -2.27
TUBE1-209ENST00000604814 MYO18BQ8IUG5 2567 aa0.89□□□□□ -2.27
TUBE1-209ENST00000604814 CFAP46Q8IYW2 2715 aa0.88□□□□□ -2.27
TUBE1-209ENST00000604814 FASNP49327 2511 aaKnown RBP0.88□□□□□ -2.27
TUBE1-209ENST00000604814 KRTAP8-1Q8IUC2 63 aa0.88□□□□□ -2.27
TUBE1-209ENST00000604814 TEP1Q99973 2627 aaKnown RBP0.87□□□□□ -2.27
TUBE1-209ENST00000604814 DNAH1Q9P2D7 4330 aa0.87□□□□□ -2.27
TUBE1-209ENST00000604814 VPS13CQ709C8 3753 aa0.86□□□□□ -2.27
TUBE1-209ENST00000604814 NIPBLQ6KC79 2804 aaeCLIP0.86□□□□□ -2.27
TUBE1-209ENST00000604814 CENPEQ02224 2701 aa0.86□□□□□ -2.27
TUBE1-209ENST00000604814 DNAH10Q8IVF4 4471 aa0.86□□□□□ -2.27
TUBE1-209ENST00000604814 MAST4O15021 2626 aa0.85□□□□□ -2.27
TUBE1-209ENST00000604814 FLNAP21333 2647 aaKnown RBP0.85□□□□□ -2.27
TUBE1-209ENST00000604814 IGSF10Q6WRI0 2623 aa0.85□□□□□ -2.27
TUBE1-209ENST00000604814 FLGP20930 4061 aaPredicted RBP0.85□□□□□ -2.27
TUBE1-209ENST00000604814 ITPR2Q14571 2701 aa0.85□□□□□ -2.27
TUBE1-209ENST00000604814 FAT3Q8TDW7 4589 aa0.85□□□□□ -2.27
TUBE1-209ENST00000604814 SPRR2BP35325 72 aa0.84□□□□□ -2.27
TUBE1-209ENST00000604814 RPS29P62273 56 aaKnown RBP0.84□□□□□ -2.27
TUBE1-209ENST00000604814 LPAP08519 4548 aa0.84□□□□□ -2.28
TUBE1-209ENST00000604814 TENM3Q9P273 2699 aa0.84□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms