RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 TRACP01848 142 aa1.81□□□□□ -2.12
VRK3-222ENST00000601324 FXYD2P54710 66 aa1.81□□□□□ -2.12
VRK3-222ENST00000601324 KRTAP12-3P60328 96 aa1.81□□□□□ -2.12
VRK3-222ENST00000601324 KRTAP25-1Q3LHN0 102 aa1.81□□□□□ -2.12
VRK3-222ENST00000601324 Q5VV11 94 aa1.81□□□□□ -2.12
VRK3-222ENST00000601324 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
VRK3-222ENST00000601324 SOSTDC1Q6X4U4 206 aa1.81□□□□□ -2.12
VRK3-222ENST00000601324 TRBV7-7A0A0K0K1E9 115 aa1.8□□□□□ -2.12
VRK3-222ENST00000601324 MYMXA0A1B0GTQ4 84 aa1.8□□□□□ -2.12
VRK3-222ENST00000601324 LINC01549A6NIU2 74 aa1.8□□□□□ -2.12
VRK3-222ENST00000601324 ELOF1P60002 83 aaKnown RBP1.8□□□□□ -2.12
VRK3-222ENST00000601324 TMEM258P61165 79 aa1.8□□□□□ -2.12
VRK3-222ENST00000601324 C4orf26Q17RF5 130 aa1.8□□□□□ -2.12
VRK3-222ENST00000601324 NHP2Q9NX24 153 aaKnown RBP1.8□□□□□ -2.12
VRK3-222ENST00000601324 K7ERJ3 54 aa1.79□□□□□ -2.12
VRK3-222ENST00000601324 K7ERS5 55 aa1.79□□□□□ -2.12
VRK3-222ENST00000601324 DPM2O94777 84 aa1.79□□□□□ -2.12
VRK3-222ENST00000601324 ACYP1P07311 99 aa1.79□□□□□ -2.12
VRK3-222ENST00000601324 COX7CP15954 63 aa1.79□□□□□ -2.12
VRK3-222ENST00000601324 ANKRD29Q8N6D5 301 aa1.79□□□□□ -2.12
VRK3-222ENST00000601324 IGKCP01834 107 aa1.78□□□□□ -2.12
VRK3-222ENST00000601324 TSPEAR-AS2P59090 65 aa1.78□□□□□ -2.12
VRK3-222ENST00000601324 KRTAP8-1Q8IUC2 63 aa1.78□□□□□ -2.12
VRK3-222ENST00000601324 IFI27L1Q96BM0 104 aa1.78□□□□□ -2.12
VRK3-222ENST00000601324 FAM236AA0A1B0GUQ0 79 aa1.77□□□□□ -2.13
VRK3-222ENST00000601324 FAM236BA0A1B0GV22 79 aa1.77□□□□□ -2.13
VRK3-222ENST00000601324 ATOX1O00244 68 aa1.77□□□□□ -2.13
VRK3-222ENST00000601324 HBDP02042 147 aa1.77□□□□□ -2.13
VRK3-222ENST00000601324 S100A7L2Q5SY68 101 aa1.77□□□□□ -2.13
VRK3-222ENST00000601324 TMEM170BQ5T4T1 132 aa1.77□□□□□ -2.13
VRK3-222ENST00000601324 DEFB105AQ8NG35 78 aa1.77□□□□□ -2.13
VRK3-222ENST00000601324 J3QQQ9 107 aa1.76□□□□□ -2.13
VRK3-222ENST00000601324 ATXN8Q156A1 80 aa1.76□□□□□ -2.13
VRK3-222ENST00000601324 LINC00643Q86TS7 51 aa1.76□□□□□ -2.13
VRK3-222ENST00000601324 COPS9Q8WXC6 57 aa1.76□□□□□ -2.13
VRK3-222ENST00000601324 A0A0B4J2C4 111 aa1.75□□□□□ -2.13
VRK3-222ENST00000601324 hADV29S1A0JD25 119 aa1.75□□□□□ -2.13
VRK3-222ENST00000601324 H3BT86 120 aa1.75□□□□□ -2.13
VRK3-222ENST00000601324 COX7BP24311 80 aa1.75□□□□□ -2.13
VRK3-222ENST00000601324 KRTAP12-4P60329 112 aa1.75□□□□□ -2.13
VRK3-222ENST00000601324 PMAIP1Q13794 54 aa1.75□□□□□ -2.13
VRK3-222ENST00000601324 PRO1854Q9UHT4 67 aa1.75□□□□□ -2.13
VRK3-222ENST00000601324 SERP1Q9Y6X1 66 aa1.75□□□□□ -2.13
VRK3-222ENST00000601324 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
VRK3-222ENST00000601324 TRAV12-1A0A0B4J245 112 aa1.74□□□□□ -2.13
VRK3-222ENST00000601324 TRBV7-6A0A0J9YX20 115 aa1.74□□□□□ -2.13
VRK3-222ENST00000601324 A0A1W2PNM2 257 aa1.74□□□□□ -2.13
VRK3-222ENST00000601324 LST1O00453 97 aa1.74□□□□□ -2.13
VRK3-222ENST00000601324 PLNP26678 52 aa1.74□□□□□ -2.13
VRK3-222ENST00000601324 SPINK7P58062 85 aa1.74□□□□□ -2.13
VRK3-222ENST00000601324 NPC2P61916 151 aa1.74□□□□□ -2.13
VRK3-222ENST00000601324 HIST1H4AP62805 103 aaKnown RBP1.74□□□□□ -2.13
VRK3-222ENST00000601324 SERP2Q8N6R1 65 aa1.74□□□□□ -2.13
VRK3-222ENST00000601324 CLEC2BQ92478 149 aa1.74□□□□□ -2.13
VRK3-222ENST00000601324 COX6CP09669 75 aa1.73□□□□□ -2.13
VRK3-222ENST00000601324 MT1XP80297 61 aa1.73□□□□□ -2.13
VRK3-222ENST00000601324 Q6JHZ5 121 aa1.73□□□□□ -2.13
VRK3-222ENST00000601324 DSCR8Q96T75 97 aa1.73□□□□□ -2.13
VRK3-222ENST00000601324 TTTY13Q9BZ97 58 aa1.73□□□□□ -2.13
VRK3-222ENST00000601324 A0A1B0GU33 70 aa1.72□□□□□ -2.13
VRK3-222ENST00000601324 SCGB1D4Q6XE38 83 aa1.72□□□□□ -2.13
VRK3-222ENST00000601324 PRR15Q8IV56 129 aa1.72□□□□□ -2.13
VRK3-222ENST00000601324 ZNF815PA8K554 130 aa1.71□□□□□ -2.14
VRK3-222ENST00000601324 LEPROTO15243 131 aa1.71□□□□□ -2.14
VRK3-222ENST00000601324 ATP5EP56381 51 aaPredicted RBP1.71□□□□□ -2.14
VRK3-222ENST00000601324 WFDC13Q8IUB5 93 aa1.71□□□□□ -2.14
VRK3-222ENST00000601324 BRK1Q8WUW1 75 aa1.71□□□□□ -2.14
VRK3-222ENST00000601324 A6NED7 52 aa1.7□□□□□ -2.14
VRK3-222ENST00000601324 NDUFC1O43677 76 aa1.7□□□□□ -2.14
VRK3-222ENST00000601324 LINC00313P59037 77 aa1.7□□□□□ -2.14
VRK3-222ENST00000601324 H1FX-AS1Q4G0G2 97 aa1.7□□□□□ -2.14
VRK3-222ENST00000601324 LINC00308Q8TCZ7 52 aa1.7□□□□□ -2.14
VRK3-222ENST00000601324 MUSTN1Q8IVN3 82 aa1.69□□□□□ -2.14
VRK3-222ENST00000601324 CYSTM1Q9H1C7 97 aa1.69□□□□□ -2.14
VRK3-222ENST00000601324 TRAV7A0A075B6U4 112 aa1.68□□□□□ -2.14
VRK3-222ENST00000601324 TRAV13-2A0A0B4J235 113 aa1.68□□□□□ -2.14
VRK3-222ENST00000601324 H7BZZ5 65 aa1.68□□□□□ -2.14
VRK3-222ENST00000601324 TIMM17BO60830 172 aa1.68□□□□□ -2.14
VRK3-222ENST00000601324 CCKP06307 115 aa1.68□□□□□ -2.14
VRK3-222ENST00000601324 RBM3P98179 157 aaKnown RBP1.68□□□□□ -2.14
VRK3-222ENST00000601324 KLKP1Q107X0 134 aa1.68□□□□□ -2.14
VRK3-222ENST00000601324 F8WEM9 126 aa1.67□□□□□ -2.14
VRK3-222ENST00000601324 BAALC-AS2P0C853 105 aa1.67□□□□□ -2.14
VRK3-222ENST00000601324 ATP5EP2Q5VTU8 51 aa1.67□□□□□ -2.14
VRK3-222ENST00000601324 C20orf197Q8N268 126 aa1.67□□□□□ -2.14
VRK3-222ENST00000601324 A0A087WSZ3 146 aa1.66□□□□□ -2.14
VRK3-222ENST00000601324 IGKV3D-7A0A0C4DH55 119 aa1.66□□□□□ -2.14
VRK3-222ENST00000601324 MT4P47944 62 aa1.66□□□□□ -2.14
VRK3-222ENST00000601324 Q1T7F1 81 aa1.66□□□□□ -2.14
VRK3-222ENST00000601324 LINC00575Q6W349 94 aa1.66□□□□□ -2.14
VRK3-222ENST00000601324 DNAL4O96015 105 aa1.65□□□□□ -2.15
VRK3-222ENST00000601324 Q6ZQY7 126 aa1.65□□□□□ -2.15
VRK3-222ENST00000601324 KTN1-AS1Q86SY8 53 aa1.65□□□□□ -2.15
VRK3-222ENST00000601324 LINC00472Q9H8W2 130 aa1.65□□□□□ -2.15
VRK3-222ENST00000601324 A0A087WVE0 104 aa1.64□□□□□ -2.15
VRK3-222ENST00000601324 H0YGX0 51 aa1.64□□□□□ -2.15
VRK3-222ENST00000601324 SMIM11BQ8TCY0 68 aa1.64□□□□□ -2.15
VRK3-222ENST00000601324 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
VRK3-222ENST00000601324 JMJD7-PLA2G4BH0Y9G9 81 aa1.63□□□□□ -2.15
VRK3-222ENST00000601324 C8orf87E5RJ46 101 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms