RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 CEP250Q9BV73 2442 aa0.93□□□□□ -2.26
PAF1-208ENST00000598594 HTN1P15515 57 aa0.93□□□□□ -2.26
PAF1-208ENST00000598594 ZANQ9Y493 2812 aa0.93□□□□□ -2.26
PAF1-208ENST00000598594 NBEAQ8NFP9 2946 aa0.92□□□□□ -2.26
PAF1-208ENST00000598594 KRTAP6-2Q3LI66 62 aa0.91□□□□□ -2.26
PAF1-208ENST00000598594 KALRNO60229 2985 aa0.91□□□□□ -2.26
PAF1-208ENST00000598594 MYO18BQ8IUG5 2567 aa0.9□□□□□ -2.27
PAF1-208ENST00000598594 FLGP20930 4061 aaPredicted RBP0.9□□□□□ -2.27
PAF1-208ENST00000598594 DNAH6Q9C0G6 4158 aa0.9□□□□□ -2.27
PAF1-208ENST00000598594 MT1AP04731 61 aa0.9□□□□□ -2.27
PAF1-208ENST00000598594 CFAP54Q96N23 3096 aa0.9□□□□□ -2.27
PAF1-208ENST00000598594 LAMA5O15230 3695 aa0.9□□□□□ -2.27
PAF1-208ENST00000598594 SPRR2AP35326 72 aa0.89□□□□□ -2.27
PAF1-208ENST00000598594 SPTBN5Q9NRC6 3674 aaKnown RBP0.88□□□□□ -2.27
PAF1-208ENST00000598594 AKAP9Q99996 3911 aa0.88□□□□□ -2.27
PAF1-208ENST00000598594 FASNP49327 2511 aaKnown RBP0.87□□□□□ -2.27
PAF1-208ENST00000598594 LPAP08519 4548 aa0.87□□□□□ -2.27
PAF1-208ENST00000598594 SMR3BP02814 79 aaPredicted RBP0.87□□□□□ -2.27
PAF1-208ENST00000598594 DEFB124Q8NES8 71 aa0.87□□□□□ -2.27
PAF1-208ENST00000598594 TEP1Q99973 2627 aaKnown RBP0.87□□□□□ -2.27
PAF1-208ENST00000598594 USP9XQ93008 2570 aaPredicted RBP0.86□□□□□ -2.27
PAF1-208ENST00000598594 DNAH9Q9NYC9 4486 aa0.84□□□□□ -2.27
PAF1-208ENST00000598594 TGP01266 2768 aa0.84□□□□□ -2.28
PAF1-208ENST00000598594 DMXL2Q8TDJ6 3036 aa0.83□□□□□ -2.28
PAF1-208ENST00000598594 KRTAP19-5Q3LI72 72 aa0.83□□□□□ -2.28
PAF1-208ENST00000598594 TENM3Q9P273 2699 aa0.83□□□□□ -2.28
PAF1-208ENST00000598594 IGSF10Q6WRI0 2623 aa0.83□□□□□ -2.28
PAF1-208ENST00000598594 ITPR1Q14643 2758 aa0.82□□□□□ -2.28
PAF1-208ENST00000598594 CSMD1Q96PZ7 3565 aa0.82□□□□□ -2.28
PAF1-208ENST00000598594 DNAH1Q9P2D7 4330 aa0.81□□□□□ -2.28
PAF1-208ENST00000598594 APOBP04114 4563 aaKnown RBP0.81□□□□□ -2.28
PAF1-208ENST00000598594 LRBAP50851 2863 aa0.8□□□□□ -2.28
PAF1-208ENST00000598594 WDR87Q6ZQQ6 2873 aa0.8□□□□□ -2.28
PAF1-208ENST00000598594 SVEP1Q4LDE5 3571 aa0.8□□□□□ -2.28
PAF1-208ENST00000598594 LAMA3Q16787 3333 aa0.8□□□□□ -2.28
PAF1-208ENST00000598594 FAT3Q8TDW7 4589 aa0.8□□□□□ -2.28
PAF1-208ENST00000598594 TRIOO75962 3097 aa0.79□□□□□ -2.28
PAF1-208ENST00000598594 DNAH10Q8IVF4 4471 aa0.79□□□□□ -2.28
PAF1-208ENST00000598594 MXRA5Q9NR99 2828 aa0.79□□□□□ -2.28
PAF1-208ENST00000598594 SPRR2EP22531 72 aa0.78□□□□□ -2.28
PAF1-208ENST00000598594 SPRR2FQ96RM1 72 aa0.78□□□□□ -2.28
PAF1-208ENST00000598594 LAMA1P25391 3075 aa0.78□□□□□ -2.29
PAF1-208ENST00000598594 ATMQ13315 3056 aa0.78□□□□□ -2.29
PAF1-208ENST00000598594 HTTP42858 3142 aa0.78□□□□□ -2.29
PAF1-208ENST00000598594 FLNAP21333 2647 aaKnown RBP0.77□□□□□ -2.29
PAF1-208ENST00000598594 DEFB133Q30KQ1 61 aa0.76□□□□□ -2.29
PAF1-208ENST00000598594 LRP1BQ9NZR2 4599 aa0.76□□□□□ -2.29
PAF1-208ENST00000598594 MAST4O15021 2626 aa0.76□□□□□ -2.29
PAF1-208ENST00000598594 PKHD1P08F94 4074 aa0.76□□□□□ -2.29
PAF1-208ENST00000598594 FRYLO94915 3013 aa0.75□□□□□ -2.29
PAF1-208ENST00000598594 COL6A3P12111 3177 aa0.75□□□□□ -2.29
PAF1-208ENST00000598594 C5orf42Q9H799 3197 aa0.75□□□□□ -2.29
PAF1-208ENST00000598594 STATHP02808 62 aa0.75□□□□□ -2.29
PAF1-208ENST00000598594 MGAM2Q2M2H8 2515 aa0.75□□□□□ -2.29
PAF1-208ENST00000598594 ADGRG4Q8IZF6 3080 aa0.75□□□□□ -2.29
PAF1-208ENST00000598594 PRUNE2Q8WUY3 3088 aa0.74□□□□□ -2.29
PAF1-208ENST00000598594 DOPEY1Q5JWR5 2465 aa0.74□□□□□ -2.29
PAF1-208ENST00000598594 SPTAN1Q13813 2472 aaKnown RBP0.73□□□□□ -2.29
PAF1-208ENST00000598594 TEX15Q9BXT5 2789 aa0.73□□□□□ -2.29
PAF1-208ENST00000598594 FAT1Q14517 4588 aa0.72□□□□□ -2.29
PAF1-208ENST00000598594 CMYA5Q8N3K9 4069 aa0.72□□□□□ -2.29
PAF1-208ENST00000598594 HMCN2Q8NDA2 5059 aa0.71□□□□□ -2.3
PAF1-208ENST00000598594 NIPBLQ6KC79 2804 aaeCLIP0.71□□□□□ -2.3
PAF1-208ENST00000598594 SMG1Q96Q15 3661 aaKnown RBP0.7□□□□□ -2.3
PAF1-208ENST00000598594 PLECQ15149 4684 aaKnown RBP0.7□□□□□ -2.3
PAF1-208ENST00000598594 MAP1AP78559 2803 aaPredicted RBP0.7□□□□□ -2.3
PAF1-208ENST00000598594 A0A096LPF7 62 aa0.68□□□□□ -2.3
PAF1-208ENST00000598594 FAT4Q6V0I7 4981 aa0.68□□□□□ -2.3
PAF1-208ENST00000598594 CFAP46Q8IYW2 2715 aa0.67□□□□□ -2.3
PAF1-208ENST00000598594 DNAH12Q6ZR08 3092 aa0.67□□□□□ -2.3
PAF1-208ENST00000598594 SZT2Q5T011 3432 aa0.65□□□□□ -2.31
PAF1-208ENST00000598594 RPS29P62273 56 aaKnown RBP0.65□□□□□ -2.31
PAF1-208ENST00000598594 NBEAL1Q6ZS30 2694 aa0.63□□□□□ -2.31
PAF1-208ENST00000598594 KRTAP5-10Q6L8G5 202 aa0.63□□□□□ -2.31
PAF1-208ENST00000598594 DEFB108BQ8NET1 73 aa0.63□□□□□ -2.31
PAF1-208ENST00000598594 TRRAPQ9Y4A5 3859 aa0.62□□□□□ -2.31
PAF1-208ENST00000598594 ITPR2Q14571 2701 aa0.61□□□□□ -2.31
PAF1-208ENST00000598594 HERC1Q15751 4861 aa0.61□□□□□ -2.31
PAF1-208ENST00000598594 LINC01556Q5JQF7 62 aa0.6□□□□□ -2.31
PAF1-208ENST00000598594 CSMD2Q7Z408 3487 aa0.6□□□□□ -2.31
PAF1-208ENST00000598594 DMDP11532 3685 aa0.59□□□□□ -2.32
PAF1-208ENST00000598594 MUC16Q8WXI7 14507 aa0.59□□□□□ -2.32
PAF1-208ENST00000598594 MUC5BQ9HC84 5762 aaPredicted RBP0.58□□□□□ -2.32
PAF1-208ENST00000598594 MKI67P46013 3256 aaKnown RBP0.58□□□□□ -2.32
PAF1-208ENST00000598594 STAB2Q8WWQ8 2551 aa0.58□□□□□ -2.32
PAF1-208ENST00000598594 DNAH5Q8TE73 4624 aa0.57□□□□□ -2.32
PAF1-208ENST00000598594 TLN1Q9Y490 2541 aaKnown RBP0.57□□□□□ -2.32
PAF1-208ENST00000598594 XIRP2A4UGR9 3374 aa0.57□□□□□ -2.32
PAF1-208ENST00000598594 FREM2Q5SZK8 3169 aa0.57□□□□□ -2.32
PAF1-208ENST00000598594 DCHS1Q96JQ0 3298 aa0.56□□□□□ -2.32
PAF1-208ENST00000598594 BOD1L1Q8NFC6 3051 aa0.56□□□□□ -2.32
PAF1-208ENST00000598594 DNAH17Q9UFH2 4485 aa0.55□□□□□ -2.32
PAF1-208ENST00000598594 CD52P31358 61 aa0.55□□□□□ -2.32
PAF1-208ENST00000598594 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
PAF1-208ENST00000598594 AHNAK2Q8IVF2 5795 aa0.53□□□□□ -2.32
PAF1-208ENST00000598594 COX14Q96I36 57 aa0.53□□□□□ -2.32
PAF1-208ENST00000598594 DYNC1H1Q14204 4646 aaKnown RBP0.52□□□□□ -2.33
PAF1-208ENST00000598594 SRCAPQ6ZRS2 3230 aa0.52□□□□□ -2.33
PAF1-208ENST00000598594 MUC3AQ02505 3323 aa0.52□□□□□ -2.33
PAF1-208ENST00000598594 MT1EP04732 61 aa0.52□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms