RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 KRTAP23-1A1A580 65 aa5.56□□□□□ -1.52
DNMT1-228ENST00000592705 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
DNMT1-228ENST00000592705 PLECQ15149 4684 aaKnown RBP5.53□□□□□ -1.52
DNMT1-228ENST00000592705 CSMD3Q7Z407 3707 aa5.52□□□□□ -1.53
DNMT1-228ENST00000592705 DNAH17Q9UFH2 4485 aa5.52□□□□□ -1.53
DNMT1-228ENST00000592705 DNAH5Q8TE73 4624 aa5.51□□□□□ -1.53
DNMT1-228ENST00000592705 VPS13DQ5THJ4 4388 aa5.5□□□□□ -1.53
DNMT1-228ENST00000592705 LORP23490 312 aaPredicted RBP5.49□□□□□ -1.53
DNMT1-228ENST00000592705 INE1O15225 51 aa5.49□□□□□ -1.53
DNMT1-228ENST00000592705 DNAH10Q8IVF4 4471 aa5.49□□□□□ -1.53
DNMT1-228ENST00000592705 CRCT1Q9UGL9 99 aa5.46□□□□□ -1.53
DNMT1-228ENST00000592705 KRTAP8-1Q8IUC2 63 aa5.45□□□□□ -1.54
DNMT1-228ENST00000592705 DNAH11Q96DT5 4516 aa5.44□□□□□ -1.54
DNMT1-228ENST00000592705 DNAH2Q9P225 4427 aa5.43□□□□□ -1.54
DNMT1-228ENST00000592705 DNAH3Q8TD57 4116 aa5.41□□□□□ -1.54
DNMT1-228ENST00000592705 KRTAP12-3P60328 96 aa5.37□□□□□ -1.55
DNMT1-228ENST00000592705 LCE3AQ5TA76 89 aa5.37□□□□□ -1.55
DNMT1-228ENST00000592705 MT1HP80294 61 aa5.35□□□□□ -1.55
DNMT1-228ENST00000592705 ANK2Q01484 3957 aa5.33□□□□□ -1.56
DNMT1-228ENST00000592705 CMYA5Q8N3K9 4069 aa5.33□□□□□ -1.56
DNMT1-228ENST00000592705 DNAH8Q96JB1 4490 aa5.32□□□□□ -1.56
DNMT1-228ENST00000592705 STARD9Q9P2P6 4700 aa5.29□□□□□ -1.56
DNMT1-228ENST00000592705 DYNC2H1Q8NCM8 4307 aaKnown RBP5.27□□□□□ -1.57
DNMT1-228ENST00000592705 DYNC1H1Q14204 4646 aaKnown RBP5.27□□□□□ -1.57
DNMT1-228ENST00000592705 SACSQ9NZJ4 4579 aa5.26□□□□□ -1.57
DNMT1-228ENST00000592705 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
DNMT1-228ENST00000592705 LRP1BQ9NZR2 4599 aa5.25□□□□□ -1.57
DNMT1-228ENST00000592705 RYR1P21817 5038 aa5.24□□□□□ -1.57
DNMT1-228ENST00000592705 MT2AP02795 61 aa5.21□□□□□ -1.58
DNMT1-228ENST00000592705 FAT2Q9NYQ8 4349 aa5.18□□□□□ -1.58
DNMT1-228ENST00000592705 FAT1Q14517 4588 aa5.15□□□□□ -1.58
DNMT1-228ENST00000592705 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.59
DNMT1-228ENST00000592705 SPRR2GQ9BYE4 73 aa5.11□□□□□ -1.59
DNMT1-228ENST00000592705 LYSTQ99698 3801 aa5.1□□□□□ -1.59
DNMT1-228ENST00000592705 DNAH6Q9C0G6 4158 aa5.09□□□□□ -1.6
DNMT1-228ENST00000592705 KMT2AQ03164 3969 aa5.08□□□□□ -1.6
DNMT1-228ENST00000592705 VPS13BQ7Z7G8 4022 aa5.07□□□□□ -1.6
DNMT1-228ENST00000592705 HECTD4Q9Y4D8 3996 aa5.07□□□□□ -1.6
DNMT1-228ENST00000592705 PRKDCP78527 4128 aaKnown RBP5.07□□□□□ -1.6
DNMT1-228ENST00000592705 KRTAP17-1Q9BYP8 105 aa5.06□□□□□ -1.6
DNMT1-228ENST00000592705 FRAS1Q86XX4 4008 aa5.06□□□□□ -1.6
DNMT1-228ENST00000592705 MT1FP04733 61 aa5.05□□□□□ -1.6
DNMT1-228ENST00000592705 DNAH7Q8WXX0 4024 aa5.04□□□□□ -1.6
DNMT1-228ENST00000592705 APOBP04114 4563 aaKnown RBP5.03□□□□□ -1.6
DNMT1-228ENST00000592705 KIAA1109Q2LD37 5005 aa5.01□□□□□ -1.61
DNMT1-228ENST00000592705 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
DNMT1-228ENST00000592705 BIRC6Q9NR09 4857 aa5.01□□□□□ -1.61
DNMT1-228ENST00000592705 RYR3Q15413 4870 aa4.97□□□□□ -1.61
DNMT1-228ENST00000592705 SPRR2EP22531 72 aa4.91□□□□□ -1.62
DNMT1-228ENST00000592705 SPRR2BP35325 72 aa4.91□□□□□ -1.62
DNMT1-228ENST00000592705 SPRR2AP35326 72 aa4.91□□□□□ -1.62
DNMT1-228ENST00000592705 KRTAP10-5P60370 271 aa4.86□□□□□ -1.63
DNMT1-228ENST00000592705 FAT3Q8TDW7 4589 aa4.85□□□□□ -1.63
DNMT1-228ENST00000592705 HERC2O95714 4834 aa4.84□□□□□ -1.64
DNMT1-228ENST00000592705 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
DNMT1-228ENST00000592705 PCLOQ9Y6V0 5065 aa4.8□□□□□ -1.64
DNMT1-228ENST00000592705 MYCBP2O75592 4640 aa4.8□□□□□ -1.64
DNMT1-228ENST00000592705 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
DNMT1-228ENST00000592705 RYR2Q92736 4967 aa4.79□□□□□ -1.64
DNMT1-228ENST00000592705 SPRR2DP22532 72 aa4.78□□□□□ -1.64
DNMT1-228ENST00000592705 KRTAP19-1Q8IUB9 90 aa4.78□□□□□ -1.64
DNMT1-228ENST00000592705 KRTAP19-8Q3LI54 63 aa4.77□□□□□ -1.65
DNMT1-228ENST00000592705 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
DNMT1-228ENST00000592705 LRP1Q07954 4544 aaKnown RBP4.74□□□□□ -1.65
DNMT1-228ENST00000592705 PKD1P98161 4303 aa4.73□□□□□ -1.65
DNMT1-228ENST00000592705 LCE2BO14633 110 aa4.69□□□□□ -1.66
DNMT1-228ENST00000592705 KRTAP9-2Q9BYQ4 174 aa4.69□□□□□ -1.66
DNMT1-228ENST00000592705 EPPK1P58107 5090 aaKnown RBP4.69□□□□□ -1.66
DNMT1-228ENST00000592705 HERC1Q15751 4861 aa4.68□□□□□ -1.66
DNMT1-228ENST00000592705 PKHD1L1Q86WI1 4243 aa4.68□□□□□ -1.66
DNMT1-228ENST00000592705 SPRR5A0A1B0GTR4 108 aa4.65□□□□□ -1.66
DNMT1-228ENST00000592705 HYDINQ4G0P3 5121 aa4.64□□□□□ -1.67
DNMT1-228ENST00000592705 MT1XP80297 61 aa4.63□□□□□ -1.67
DNMT1-228ENST00000592705 HSPG2P98160 4391 aa4.63□□□□□ -1.67
DNMT1-228ENST00000592705 KRTAP9-8Q9BYQ0 159 aa4.61□□□□□ -1.67
DNMT1-228ENST00000592705 KRTAP9-6A0A140TA67 174 aa4.6□□□□□ -1.67
DNMT1-228ENST00000592705 MT1BP07438 61 aa4.59□□□□□ -1.68
DNMT1-228ENST00000592705 KRTAP12-4P60329 112 aa4.59□□□□□ -1.68
DNMT1-228ENST00000592705 PKHD1P08F94 4074 aa4.57□□□□□ -1.68
DNMT1-228ENST00000592705 KRTAP9-3Q9BYQ3 159 aa4.55□□□□□ -1.68
DNMT1-228ENST00000592705 LCE2CQ5TA81 110 aa4.54□□□□□ -1.68
DNMT1-228ENST00000592705 LRP2P98164 4655 aa4.52□□□□□ -1.69
DNMT1-228ENST00000592705 MT1GP13640 62 aa4.48□□□□□ -1.69
DNMT1-228ENST00000592705 TNXBP22105 4242 aa4.47□□□□□ -1.69
DNMT1-228ENST00000592705 KMT2CQ8NEZ4 4911 aaKnown RBP4.45□□□□□ -1.7
DNMT1-228ENST00000592705 LCE2DQ5TA82 110 aaPredicted RBP4.45□□□□□ -1.7
DNMT1-228ENST00000592705 KRTAP19-2Q3LHN2 52 aa4.44□□□□□ -1.7
DNMT1-228ENST00000592705 ABCA13Q86UQ4 5058 aa4.39□□□□□ -1.71
DNMT1-228ENST00000592705 UBR4Q5T4S7 5183 aa4.38□□□□□ -1.71
DNMT1-228ENST00000592705 LPAP08519 4548 aa4.38□□□□□ -1.71
DNMT1-228ENST00000592705 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
DNMT1-228ENST00000592705 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
DNMT1-228ENST00000592705 KRTAP19-6Q3LI70 58 aa4.33□□□□□ -1.72
DNMT1-228ENST00000592705 MUC17Q685J3 4493 aa4.31□□□□□ -1.72
DNMT1-228ENST00000592705 FLGP20930 4061 aaPredicted RBP4.3□□□□□ -1.72
DNMT1-228ENST00000592705 KRTAP9-7A8MTY7 169 aa4.29□□□□□ -1.72
DNMT1-228ENST00000592705 LCE2AQ5TA79 106 aaPredicted RBP4.29□□□□□ -1.72
DNMT1-228ENST00000592705 KRTAP19-3Q7Z4W3 81 aa4.29□□□□□ -1.72
DNMT1-228ENST00000592705 LCE3BQ5TA77 95 aa4.27□□□□□ -1.73
DNMT1-228ENST00000592705 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms