RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 KRTAP10-8P60410 259 aa1.9□□□□□ -2.11
ZNF540-207ENST00000589285 IGLV8-61A0A075B6I0 122 aa1.9□□□□□ -2.11
ZNF540-207ENST00000589285 A0A087WSZ3 146 aa1.9□□□□□ -2.11
ZNF540-207ENST00000589285 Q8N9L7 120 aa1.9□□□□□ -2.11
ZNF540-207ENST00000589285 UBL5Q9BZL1 73 aa1.9□□□□□ -2.11
ZNF540-207ENST00000589285 CYP4F30PQ9H0H9 118 aa1.9□□□□□ -2.11
ZNF540-207ENST00000589285 JMJD7-PLA2G4BH0Y9G9 81 aa1.89□□□□□ -2.11
ZNF540-207ENST00000589285 SPRR1AP35321 89 aa1.89□□□□□ -2.11
ZNF540-207ENST00000589285 C1orf64Q8NEQ6 169 aa1.89□□□□□ -2.11
ZNF540-207ENST00000589285 SPRR4Q96PI1 79 aa1.89□□□□□ -2.11
ZNF540-207ENST00000589285 LIMD2Q9BT23 127 aa1.89□□□□□ -2.11
ZNF540-207ENST00000589285 CDC42SE1Q9NRR8 79 aa1.89□□□□□ -2.11
ZNF540-207ENST00000589285 NREPQ16612 68 aa1.88□□□□□ -2.11
ZNF540-207ENST00000589285 KRTAP13-2Q52LG2 175 aa1.88□□□□□ -2.11
ZNF540-207ENST00000589285 IGFL1Q6UW32 110 aa1.88□□□□□ -2.11
ZNF540-207ENST00000589285 PRR15LQ9BU68 103 aa1.88□□□□□ -2.11
ZNF540-207ENST00000589285 C9orf92A6NGG3 77 aa1.87□□□□□ -2.11
ZNF540-207ENST00000589285 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
ZNF540-207ENST00000589285 MUC2Q02817 5179 aa1.87□□□□□ -2.11
ZNF540-207ENST00000589285 LOC110117498A0A087WWA1 95 aa1.87□□□□□ -2.11
ZNF540-207ENST00000589285 H3BQ85 93 aa1.87□□□□□ -2.11
ZNF540-207ENST00000589285 PRR4Q16378 134 aa1.87□□□□□ -2.11
ZNF540-207ENST00000589285 CASC2Q6XLA1 102 aa1.87□□□□□ -2.11
ZNF540-207ENST00000589285 KRTAP13-1Q8IUC0 172 aa1.87□□□□□ -2.11
ZNF540-207ENST00000589285 A0A1W2PNM2 257 aa1.86□□□□□ -2.11
ZNF540-207ENST00000589285 Q6ZQT0 140 aa1.86□□□□□ -2.11
ZNF540-207ENST00000589285 LRP2P98164 4655 aa1.86□□□□□ -2.11
ZNF540-207ENST00000589285 KRTAP4-3Q9BYR4 195 aa1.86□□□□□ -2.11
ZNF540-207ENST00000589285 AHNAKQ09666 5890 aaKnown RBP1.86□□□□□ -2.11
ZNF540-207ENST00000589285 RNF213Q63HN8 5207 aa1.86□□□□□ -2.11
ZNF540-207ENST00000589285 BPY2O14599 106 aa1.86□□□□□ -2.11
ZNF540-207ENST00000589285 KRTAP10-4P60372 401 aaPredicted RBP1.85□□□□□ -2.11
ZNF540-207ENST00000589285 LPAP08519 4548 aa1.85□□□□□ -2.11
ZNF540-207ENST00000589285 ADM2Q7Z4H4 148 aa1.85□□□□□ -2.11
ZNF540-207ENST00000589285 ASB16-AS1Q495Z4 193 aa1.84□□□□□ -2.11
ZNF540-207ENST00000589285 WFDC13Q8IUB5 93 aa1.84□□□□□ -2.11
ZNF540-207ENST00000589285 LINC00304Q8N9R0 145 aa1.84□□□□□ -2.11
ZNF540-207ENST00000589285 IGLV5-48A0A075B6I7 105 aa1.84□□□□□ -2.11
ZNF540-207ENST00000589285 IGKV4-1P06312 121 aa1.84□□□□□ -2.11
ZNF540-207ENST00000589285 LOC101927531A0A1B0GV80 90 aa1.83□□□□□ -2.12
ZNF540-207ENST00000589285 PDE6GP18545 87 aa1.83□□□□□ -2.12
ZNF540-207ENST00000589285 ROMO1P60602 79 aa1.83□□□□□ -2.12
ZNF540-207ENST00000589285 ZCCHC13Q8WW36 166 aaKnown RBP1.83□□□□□ -2.12
ZNF540-207ENST00000589285 UBR4Q5T4S7 5183 aa1.83□□□□□ -2.12
ZNF540-207ENST00000589285 K7EQZ3 153 aa1.82□□□□□ -2.12
ZNF540-207ENST00000589285 CSAG1Q6PB30 78 aa1.82□□□□□ -2.12
ZNF540-207ENST00000589285 A0A1B0GW54 56 aa1.81□□□□□ -2.12
ZNF540-207ENST00000589285 NDUFB1O75438 58 aa1.81□□□□□ -2.12
ZNF540-207ENST00000589285 MIR22HGQ0VDD5 57 aa1.81□□□□□ -2.12
ZNF540-207ENST00000589285 LINC00208Q96KT6 92 aa1.81□□□□□ -2.12
ZNF540-207ENST00000589285 MT1HL1P0DM35 61 aa1.8□□□□□ -2.12
ZNF540-207ENST00000589285 LINC00483Q53H64 154 aa1.8□□□□□ -2.12
ZNF540-207ENST00000589285 TNXBP22105 4242 aa1.8□□□□□ -2.12
ZNF540-207ENST00000589285 SPAG11AQ6PDA7 123 aa1.8□□□□□ -2.12
ZNF540-207ENST00000589285 Q96NJ1 140 aa1.8□□□□□ -2.12
ZNF540-207ENST00000589285 SPRR1BP22528 89 aa1.8□□□□□ -2.12
ZNF540-207ENST00000589285 SSBP3-AS1Q7Z2R9 100 aa1.8□□□□□ -2.12
ZNF540-207ENST00000589285 KRTAP13-3Q3SY46 172 aa1.79□□□□□ -2.12
ZNF540-207ENST00000589285 LUZP6Q538Z0 58 aa1.79□□□□□ -2.12
ZNF540-207ENST00000589285 SPINK1P00995 79 aa1.78□□□□□ -2.12
ZNF540-207ENST00000589285 SPINK7P58062 85 aa1.78□□□□□ -2.12
ZNF540-207ENST00000589285 C8orf17Q9NRJ1 99 aa1.78□□□□□ -2.12
ZNF540-207ENST00000589285 FAT4Q6V0I7 4981 aa1.78□□□□□ -2.12
ZNF540-207ENST00000589285 SPANXA2-OT1Q8N9U9 137 aa1.77□□□□□ -2.13
ZNF540-207ENST00000589285 A8MWP4 228 aa1.77□□□□□ -2.13
ZNF540-207ENST00000589285 K7ERS5 55 aa1.77□□□□□ -2.13
ZNF540-207ENST00000589285 LINC00472Q9H8W2 130 aa1.77□□□□□ -2.13
ZNF540-207ENST00000589285 LINC01558Q9Y6Z2 57 aa1.77□□□□□ -2.13
ZNF540-207ENST00000589285 P0C880 135 aa1.76□□□□□ -2.13
ZNF540-207ENST00000589285 CRCT1Q9UGL9 99 aa1.76□□□□□ -2.13
ZNF540-207ENST00000589285 H0Y9P7 68 aa1.75□□□□□ -2.13
ZNF540-207ENST00000589285 A0A1B0GVX0 72 aa1.75□□□□□ -2.13
ZNF540-207ENST00000589285 PCOTHQ58A44 107 aa1.75□□□□□ -2.13
ZNF540-207ENST00000589285 COA5Q86WW8 74 aa1.75□□□□□ -2.13
ZNF540-207ENST00000589285 C20orf166-AS1Q96NR2 134 aa1.74□□□□□ -2.13
ZNF540-207ENST00000589285 H3BPC8 53 aa1.74□□□□□ -2.13
ZNF540-207ENST00000589285 MMP24-AS1A0A0U1RRL7 71 aa1.73□□□□□ -2.13
ZNF540-207ENST00000589285 Q5W150 140 aa1.73□□□□□ -2.13
ZNF540-207ENST00000589285 KRTAP5-5Q701N2 237 aaPredicted RBP1.73□□□□□ -2.13
ZNF540-207ENST00000589285 MUC17Q685J3 4493 aa1.73□□□□□ -2.13
ZNF540-207ENST00000589285 KRTAP25-1Q3LHN0 102 aa1.72□□□□□ -2.13
ZNF540-207ENST00000589285 MRPL34Q9BQ48 92 aaKnown RBP1.72□□□□□ -2.13
ZNF540-207ENST00000589285 RPS29P62273 56 aaKnown RBP1.72□□□□□ -2.13
ZNF540-207ENST00000589285 FSIP2Q5CZC0 6907 aa1.72□□□□□ -2.13
ZNF540-207ENST00000589285 HMCN2Q8NDA2 5059 aa1.71□□□□□ -2.14
ZNF540-207ENST00000589285 SPATA8Q6RVD6 105 aa1.7□□□□□ -2.14
ZNF540-207ENST00000589285 PP632Q6XCG6 107 aa1.7□□□□□ -2.14
ZNF540-207ENST00000589285 UQCR11O14957 56 aa1.69□□□□□ -2.14
ZNF540-207ENST00000589285 SPINT4Q6UDR6 99 aa1.69□□□□□ -2.14
ZNF540-207ENST00000589285 KRTAP5-2Q701N4 177 aa1.69□□□□□ -2.14
ZNF540-207ENST00000589285 A8MUU9 505 aa1.69□□□□□ -2.14
ZNF540-207ENST00000589285 DMAC1Q96GE9 116 aa1.69□□□□□ -2.14
ZNF540-207ENST00000589285 COX6B2Q6YFQ2 88 aa1.69□□□□□ -2.14
ZNF540-207ENST00000589285 KRTAP4-1Q9BYQ7 146 aa1.68□□□□□ -2.14
ZNF540-207ENST00000589285 A0A1B0GU69 56 aa1.67□□□□□ -2.14
ZNF540-207ENST00000589285 HRES1P13985 223 aa1.67□□□□□ -2.14
ZNF540-207ENST00000589285 TPRXLQ17RH7 258 aa1.66□□□□□ -2.14
ZNF540-207ENST00000589285 NEBP20929 6669 aa1.66□□□□□ -2.14
ZNF540-207ENST00000589285 RPL37P61927 97 aaKnown RBP1.66□□□□□ -2.14
ZNF540-207ENST00000589285 CAMK2N1Q7Z7J9 78 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms