RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 Q96NJ1 140 aa4.59□□□□□ -1.67
PTPRM-210ENST00000578916 H3BPC8 53 aa4.58□□□□□ -1.68
PTPRM-210ENST00000578916 KRTAP6-3Q3LI67 103 aa4.58□□□□□ -1.68
PTPRM-210ENST00000578916 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
PTPRM-210ENST00000578916 MIR22HGQ0VDD5 57 aa4.57□□□□□ -1.68
PTPRM-210ENST00000578916 KRTAP3-1Q9BYR8 98 aa4.57□□□□□ -1.68
PTPRM-210ENST00000578916 A0A087WSZ3 146 aa4.56□□□□□ -1.68
PTPRM-210ENST00000578916 TMEM254Q8TBM7 123 aa4.56□□□□□ -1.68
PTPRM-210ENST00000578916 C20orf166-AS1Q96NR2 134 aa4.56□□□□□ -1.68
PTPRM-210ENST00000578916 LITAFQ99732 161 aa4.56□□□□□ -1.68
PTPRM-210ENST00000578916 IGFL1Q6UW32 110 aa4.55□□□□□ -1.68
PTPRM-210ENST00000578916 A8MUU9 505 aa4.53□□□□□ -1.68
PTPRM-210ENST00000578916 MUSTN1Q8IVN3 82 aa4.53□□□□□ -1.68
PTPRM-210ENST00000578916 LOC101927531A0A1B0GV80 90 aa4.52□□□□□ -1.69
PTPRM-210ENST00000578916 BAALC-AS2P0C853 105 aa4.52□□□□□ -1.69
PTPRM-210ENST00000578916 A8MU10 97 aa4.5□□□□□ -1.69
PTPRM-210ENST00000578916 SNURFQ9Y675 71 aa4.49□□□□□ -1.69
PTPRM-210ENST00000578916 NEBP20929 6669 aa4.48□□□□□ -1.69
PTPRM-210ENST00000578916 H3BQ85 93 aa4.48□□□□□ -1.69
PTPRM-210ENST00000578916 TRBV7-4A0A0J9YYF1 115 aa4.47□□□□□ -1.69
PTPRM-210ENST00000578916 DNAL4O96015 105 aa4.47□□□□□ -1.69
PTPRM-210ENST00000578916 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.47□□□□□ -1.69
PTPRM-210ENST00000578916 PRR15LQ9BU68 103 aa4.47□□□□□ -1.69
PTPRM-210ENST00000578916 A0A087WVE0 104 aa4.46□□□□□ -1.7
PTPRM-210ENST00000578916 IGKV3D-7A0A0C4DH55 119 aa4.46□□□□□ -1.7
PTPRM-210ENST00000578916 HRES1P13985 223 aa4.46□□□□□ -1.7
PTPRM-210ENST00000578916 Q6ZQY7 126 aa4.46□□□□□ -1.7
PTPRM-210ENST00000578916 SMIM11BQ8TCY0 68 aa4.46□□□□□ -1.7
PTPRM-210ENST00000578916 DSCR10P59022 87 aa4.45□□□□□ -1.7
PTPRM-210ENST00000578916 ORMDL1Q9P0S3 153 aa4.45□□□□□ -1.7
PTPRM-210ENST00000578916 P0C880 135 aa4.44□□□□□ -1.7
PTPRM-210ENST00000578916 CSAG1Q6PB30 78 aa4.44□□□□□ -1.7
PTPRM-210ENST00000578916 LINC00575Q6W349 94 aa4.44□□□□□ -1.7
PTPRM-210ENST00000578916 SPANXA2-OT1Q8N9U9 137 aa4.43□□□□□ -1.7
PTPRM-210ENST00000578916 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
PTPRM-210ENST00000578916 MUC12Q9UKN1 5478 aa4.42□□□□□ -1.7
PTPRM-210ENST00000578916 A0A1W2PNM2 257 aa4.41□□□□□ -1.7
PTPRM-210ENST00000578916 Q8N9P0 234 aaPredicted RBP4.41□□□□□ -1.7
PTPRM-210ENST00000578916 DMAC1Q96GE9 116 aa4.39□□□□□ -1.71
PTPRM-210ENST00000578916 NDUFAF8A1L188 74 aa4.38□□□□□ -1.71
PTPRM-210ENST00000578916 NREPQ16612 68 aa4.36□□□□□ -1.71
PTPRM-210ENST00000578916 NDUFB1O75438 58 aa4.35□□□□□ -1.71
PTPRM-210ENST00000578916 A0A1B0GU33 70 aa4.34□□□□□ -1.71
PTPRM-210ENST00000578916 IGKV4-1P06312 121 aa4.33□□□□□ -1.72
PTPRM-210ENST00000578916 DEFB116Q30KQ4 102 aa4.33□□□□□ -1.72
PTPRM-210ENST00000578916 UBL5Q9BZL1 73 aa4.33□□□□□ -1.72
PTPRM-210ENST00000578916 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
PTPRM-210ENST00000578916 LINC01558Q9Y6Z2 57 aa4.31□□□□□ -1.72
PTPRM-210ENST00000578916 SPINK7P58062 85 aa4.3□□□□□ -1.72
PTPRM-210ENST00000578916 Q5W150 140 aa4.3□□□□□ -1.72
PTPRM-210ENST00000578916 ZCCHC13Q8WW36 166 aaKnown RBP4.27□□□□□ -1.73
PTPRM-210ENST00000578916 LINC00208Q96KT6 92 aa4.27□□□□□ -1.73
PTPRM-210ENST00000578916 WFDC13Q8IUB5 93 aa4.25□□□□□ -1.73
PTPRM-210ENST00000578916 MDN1Q9NU22 5596 aa4.24□□□□□ -1.73
PTPRM-210ENST00000578916 H0Y9P7 68 aa4.23□□□□□ -1.73
PTPRM-210ENST00000578916 UQCR11O14957 56 aa4.23□□□□□ -1.73
PTPRM-210ENST00000578916 LINC00472Q9H8W2 130 aa4.23□□□□□ -1.73
PTPRM-210ENST00000578916 H0YGX0 51 aa4.22□□□□□ -1.73
PTPRM-210ENST00000578916 KMT2DO14686 5537 aa4.21□□□□□ -1.73
PTPRM-210ENST00000578916 JMJD7-PLA2G4BH0Y9G9 81 aa4.21□□□□□ -1.74
PTPRM-210ENST00000578916 KRTAP2-3P0C7H8 128 aa4.21□□□□□ -1.74
PTPRM-210ENST00000578916 KRTAP5-9P26371 169 aa4.21□□□□□ -1.74
PTPRM-210ENST00000578916 KRTAP2-4Q9BYR9 128 aa4.21□□□□□ -1.74
PTPRM-210ENST00000578916 H1FX-AS1Q4G0G2 97 aa4.19□□□□□ -1.74
PTPRM-210ENST00000578916 MT1BP07438 61 aa4.16□□□□□ -1.74
PTPRM-210ENST00000578916 PDE6GP18545 87 aa4.16□□□□□ -1.74
PTPRM-210ENST00000578916 SPINT4Q6UDR6 99 aa4.15□□□□□ -1.75
PTPRM-210ENST00000578916 KRTAP10-5P60370 271 aa4.14□□□□□ -1.75
PTPRM-210ENST00000578916 KRTAP15-1Q3LI76 137 aa4.14□□□□□ -1.75
PTPRM-210ENST00000578916 SPATA8Q6RVD6 105 aa4.14□□□□□ -1.75
PTPRM-210ENST00000578916 LOC100996750A0A140TA64 210 aa4.12□□□□□ -1.75
PTPRM-210ENST00000578916 IGKV2-30P06310 120 aa4.12□□□□□ -1.75
PTPRM-210ENST00000578916 KRTAP4-6Q9BYQ5 205 aa4.12□□□□□ -1.75
PTPRM-210ENST00000578916 PRO2289Q9P1D8 64 aa4.12□□□□□ -1.75
PTPRM-210ENST00000578916 KRTAP19-8Q3LI54 63 aa4.1□□□□□ -1.75
PTPRM-210ENST00000578916 R4GN34 69 aa4.09□□□□□ -1.75
PTPRM-210ENST00000578916 SPRR2EP22531 72 aa4.06□□□□□ -1.76
PTPRM-210ENST00000578916 SPRR2BP35325 72 aa4.06□□□□□ -1.76
PTPRM-210ENST00000578916 SPRR2AP35326 72 aa4.06□□□□□ -1.76
PTPRM-210ENST00000578916 SPRR2GQ9BYE4 73 aa4.06□□□□□ -1.76
PTPRM-210ENST00000578916 LOC110117498A0A087WWA1 95 aa4.05□□□□□ -1.76
PTPRM-210ENST00000578916 KRTAP19-4Q3LI73 84 aa4.05□□□□□ -1.76
PTPRM-210ENST00000578916 COA5Q86WW8 74 aa4.05□□□□□ -1.76
PTPRM-210ENST00000578916 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
PTPRM-210ENST00000578916 KRTAP2-1Q9BYU5 128 aa4.05□□□□□ -1.76
PTPRM-210ENST00000578916 SPRR2FQ96RM1 72 aa4.04□□□□□ -1.76
PTPRM-210ENST00000578916 IGKV2D-30A0A075B6S6 120 aa4.03□□□□□ -1.76
PTPRM-210ENST00000578916 MRPL34Q9BQ48 92 aaKnown RBP4.01□□□□□ -1.77
PTPRM-210ENST00000578916 A0A1B0GU69 56 aa3.99□□□□□ -1.77
PTPRM-210ENST00000578916 MMP24-AS1A0A0U1RRL7 71 aa3.96□□□□□ -1.78
PTPRM-210ENST00000578916 S4R3F8 94 aa3.96□□□□□ -1.78
PTPRM-210ENST00000578916 ACYP2P14621 99 aa3.95□□□□□ -1.78
PTPRM-210ENST00000578916 LCE1AQ5T7P2 110 aa3.94□□□□□ -1.78
PTPRM-210ENST00000578916 SPRR2DP22532 72 aa3.93□□□□□ -1.78
PTPRM-210ENST00000578916 KRTAP8-1Q8IUC2 63 aa3.92□□□□□ -1.78
PTPRM-210ENST00000578916 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
PTPRM-210ENST00000578916 CRIPTQ9P021 101 aa3.89□□□□□ -1.79
PTPRM-210ENST00000578916 K7EQZ3 153 aa3.88□□□□□ -1.79
PTPRM-210ENST00000578916 LCE3BQ5TA77 95 aa3.84□□□□□ -1.79
PTPRM-210ENST00000578916 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms