RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 AHNAKQ09666 5890 aaKnown RBP4.21□□□□□ -1.74
GGA3-206ENST00000578773 NREPQ16612 68 aa4.21□□□□□ -1.74
GGA3-206ENST00000578773 SPATA45Q537H7 98 aa4.21□□□□□ -1.74
GGA3-206ENST00000578773 SCGB1C2P0DMR2 95 aa4.19□□□□□ -1.74
GGA3-206ENST00000578773 HCG22E2RYF7 251 aa4.18□□□□□ -1.74
GGA3-206ENST00000578773 CYSTM1Q9H1C7 97 aa4.18□□□□□ -1.74
GGA3-206ENST00000578773 A0A1B0GW54 56 aa4.17□□□□□ -1.74
GGA3-206ENST00000578773 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
GGA3-206ENST00000578773 LOC110117498A0A087WWA1 95 aa4.16□□□□□ -1.74
GGA3-206ENST00000578773 MT1EP04732 61 aa4.15□□□□□ -1.75
GGA3-206ENST00000578773 C14orf132Q9NPU4 83 aa4.15□□□□□ -1.75
GGA3-206ENST00000578773 JMJD7-PLA2G4BH0Y9G9 81 aa4.14□□□□□ -1.75
GGA3-206ENST00000578773 PDE6GP18545 87 aa4.14□□□□□ -1.75
GGA3-206ENST00000578773 S100A6P06703 90 aa4.13□□□□□ -1.75
GGA3-206ENST00000578773 CASC2Q6XLA1 102 aa4.13□□□□□ -1.75
GGA3-206ENST00000578773 VAMP8Q9BV40 100 aa4.13□□□□□ -1.75
GGA3-206ENST00000578773 CXCL6P80162 114 aa4.12□□□□□ -1.75
GGA3-206ENST00000578773 Q8N9L7 120 aa4.12□□□□□ -1.75
GGA3-206ENST00000578773 H0YAA0 97 aa4.1□□□□□ -1.75
GGA3-206ENST00000578773 HSD52Q0P140 79 aa4.1□□□□□ -1.75
GGA3-206ENST00000578773 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
GGA3-206ENST00000578773 BPY2O14599 106 aa4.09□□□□□ -1.75
GGA3-206ENST00000578773 ADM2Q7Z4H4 148 aa4.08□□□□□ -1.76
GGA3-206ENST00000578773 S100A1P23297 94 aa4.07□□□□□ -1.76
GGA3-206ENST00000578773 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
GGA3-206ENST00000578773 ATXN8Q156A1 80 aa4.06□□□□□ -1.76
GGA3-206ENST00000578773 KRTAP20-2Q3LI61 65 aa4.06□□□□□ -1.76
GGA3-206ENST00000578773 MUC5BQ9HC84 5762 aaPredicted RBP4.06□□□□□ -1.76
GGA3-206ENST00000578773 NAA38Q9BRA0 125 aaKnown RBP4.02□□□□□ -1.77
GGA3-206ENST00000578773 MT1MQ8N339 61 aa4.01□□□□□ -1.77
GGA3-206ENST00000578773 NDUFC1O43677 76 aa3.98□□□□□ -1.77
GGA3-206ENST00000578773 MT1GP13640 62 aa3.98□□□□□ -1.77
GGA3-206ENST00000578773 LINC01554Q52M75 96 aa3.97□□□□□ -1.77
GGA3-206ENST00000578773 P0C880 135 aa3.96□□□□□ -1.78
GGA3-206ENST00000578773 R4GN34 69 aa3.96□□□□□ -1.78
GGA3-206ENST00000578773 K7EP34 96 aa3.95□□□□□ -1.78
GGA3-206ENST00000578773 M0QZ58 72 aa3.95□□□□□ -1.78
GGA3-206ENST00000578773 CYP4F30PQ9H0H9 118 aa3.94□□□□□ -1.78
GGA3-206ENST00000578773 UQCR10Q9UDW1 63 aa3.92□□□□□ -1.78
GGA3-206ENST00000578773 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.79
GGA3-206ENST00000578773 TP53AIP1Q9HCN2 124 aa3.9□□□□□ -1.79
GGA3-206ENST00000578773 PP632Q6XCG6 107 aa3.89□□□□□ -1.79
GGA3-206ENST00000578773 TSTD3H0UI37 97 aa3.88□□□□□ -1.79
GGA3-206ENST00000578773 PYY3Q5JQD4 70 aa3.88□□□□□ -1.79
GGA3-206ENST00000578773 KRTAP19-5Q3LI72 72 aa3.87□□□□□ -1.79
GGA3-206ENST00000578773 KRTAP5-8O75690 187 aa3.85□□□□□ -1.79
GGA3-206ENST00000578773 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
GGA3-206ENST00000578773 MT1LQ93083 61 aa3.84□□□□□ -1.79
GGA3-206ENST00000578773 ACYP1P07311 99 aa3.82□□□□□ -1.8
GGA3-206ENST00000578773 LOC101927531A0A1B0GV80 90 aa3.81□□□□□ -1.8
GGA3-206ENST00000578773 H3BT86 120 aa3.81□□□□□ -1.8
GGA3-206ENST00000578773 TRAV22A0A0B4J277 110 aa3.8□□□□□ -1.8
GGA3-206ENST00000578773 C20orf197Q8N268 126 aa3.8□□□□□ -1.8
GGA3-206ENST00000578773 UBL5Q9BZL1 73 aa3.8□□□□□ -1.8
GGA3-206ENST00000578773 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
GGA3-206ENST00000578773 BATFQ16520 125 aa3.79□□□□□ -1.8
GGA3-206ENST00000578773 KRTAP3-2Q9BYR7 98 aa3.79□□□□□ -1.8
GGA3-206ENST00000578773 M0R143 59 aa3.78□□□□□ -1.8
GGA3-206ENST00000578773 SPCS1Q9Y6A9 102 aa3.76□□□□□ -1.81
GGA3-206ENST00000578773 KRTAP5-5Q701N2 237 aaPredicted RBP3.75□□□□□ -1.81
GGA3-206ENST00000578773 MT-ATP8P03928 68 aa3.72□□□□□ -1.81
GGA3-206ENST00000578773 A0A1W2PPM0 123 aa3.71□□□□□ -1.82
GGA3-206ENST00000578773 KRTAP12-4P60329 112 aa3.7□□□□□ -1.82
GGA3-206ENST00000578773 H0Y9P7 68 aa3.69□□□□□ -1.82
GGA3-206ENST00000578773 C9orf118A6NHY6 69 aa3.66□□□□□ -1.82
GGA3-206ENST00000578773 ATOX1O00244 68 aa3.64□□□□□ -1.83
GGA3-206ENST00000578773 A0A0D9SG42 100 aa3.63□□□□□ -1.83
GGA3-206ENST00000578773 UQCRQO14949 82 aa3.63□□□□□ -1.83
GGA3-206ENST00000578773 KRTAP9-9Q9BYP9 154 aa3.63□□□□□ -1.83
GGA3-206ENST00000578773 KRTAP5-2Q701N4 177 aa3.62□□□□□ -1.83
GGA3-206ENST00000578773 TAX1BP3O14907 124 aa3.61□□□□□ -1.83
GGA3-206ENST00000578773 LOC100996750A0A140TA64 210 aa3.6□□□□□ -1.83
GGA3-206ENST00000578773 LINC00208Q96KT6 92 aa3.6□□□□□ -1.83
GGA3-206ENST00000578773 CAMK2N1Q7Z7J9 78 aa3.59□□□□□ -1.83
GGA3-206ENST00000578773 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
GGA3-206ENST00000578773 TMA7Q9Y2S6 64 aaKnown RBP3.56□□□□□ -1.84
GGA3-206ENST00000578773 PRO0461Q9UI25 63 aa3.54□□□□□ -1.84
GGA3-206ENST00000578773 HIST1H4AP62805 103 aaKnown RBP3.53□□□□□ -1.84
GGA3-206ENST00000578773 DMAC1Q96GE9 116 aa3.51□□□□□ -1.85
GGA3-206ENST00000578773 C10orf95Q9H7T3 257 aa3.49□□□□□ -1.85
GGA3-206ENST00000578773 MP68P56378 58 aa3.48□□□□□ -1.85
GGA3-206ENST00000578773 KRTAP13-4Q3LI77 160 aa3.46□□□□□ -1.86
GGA3-206ENST00000578773 ETDBQ3ZM63 59 aa3.42□□□□□ -1.86
GGA3-206ENST00000578773 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
GGA3-206ENST00000578773 TRAV7A0A075B6U4 112 aa3.41□□□□□ -1.86
GGA3-206ENST00000578773 OCR1Q9BZK8 76 aa3.4□□□□□ -1.87
GGA3-206ENST00000578773 SMIM6P0DI80 62 aa3.38□□□□□ -1.87
GGA3-206ENST00000578773 ATP5EP2Q5VTU8 51 aa3.38□□□□□ -1.87
GGA3-206ENST00000578773 SPTSSBQ8NFR3 76 aa3.38□□□□□ -1.87
GGA3-206ENST00000578773 KRTAP5-1Q6L8H4 278 aa3.37□□□□□ -1.87
GGA3-206ENST00000578773 ACYP2P14621 99 aa3.36□□□□□ -1.87
GGA3-206ENST00000578773 F8W1H4 67 aa3.34□□□□□ -1.87
GGA3-206ENST00000578773 KRTAP6-1Q3LI64 71 aa3.33□□□□□ -1.88
GGA3-206ENST00000578773 H3BPC8 53 aa3.32□□□□□ -1.88
GGA3-206ENST00000578773 CHKB-CPT1BH3BT56 60 aa3.32□□□□□ -1.88
GGA3-206ENST00000578773 SPINT4Q6UDR6 99 aa3.31□□□□□ -1.88
GGA3-206ENST00000578773 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
GGA3-206ENST00000578773 COL5A1-AS1Q5SY13 56 aa3.3□□□□□ -1.88
GGA3-206ENST00000578773 GTF2H5Q6ZYL4 71 aa3.29□□□□□ -1.88
GGA3-206ENST00000578773 KRTAP9-4Q9BYQ2 154 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 278.2 ms