RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 MIR22HGQ0VDD5 57 aa1.51□□□□□ -2.17
ERCC4-204ENST00000573018 Q6ZRN7 208 aaPredicted RBP1.5□□□□□ -2.17
ERCC4-204ENST00000573018 Q96NJ1 140 aa1.5□□□□□ -2.17
ERCC4-204ENST00000573018 PKD1L1Q8TDX9 2849 aa1.5□□□□□ -2.17
ERCC4-204ENST00000573018 ANK3Q12955 4377 aaKnown RBP1.5□□□□□ -2.17
ERCC4-204ENST00000573018 A0A0G2JQZ4 141 aa1.49□□□□□ -2.17
ERCC4-204ENST00000573018 KRTAP13-2Q52LG2 175 aa1.49□□□□□ -2.17
ERCC4-204ENST00000573018 LINC00304Q8N9R0 145 aa1.49□□□□□ -2.17
ERCC4-204ENST00000573018 ZNF469Q96JG9 3925 aaPredicted RBP1.48□□□□□ -2.17
ERCC4-204ENST00000573018 FBN1P35555 2871 aaKnown RBP1.48□□□□□ -2.17
ERCC4-204ENST00000573018 A6NN06 94 aa1.48□□□□□ -2.17
ERCC4-204ENST00000573018 SPATA8Q6RVD6 105 aa1.48□□□□□ -2.17
ERCC4-204ENST00000573018 RBM12B-AS1Q9P1G2 102 aa1.48□□□□□ -2.17
ERCC4-204ENST00000573018 TRRAPQ9Y4A5 3859 aa1.46□□□□□ -2.18
ERCC4-204ENST00000573018 KRTAP12-3P60328 96 aa1.46□□□□□ -2.18
ERCC4-204ENST00000573018 ANK2Q01484 3957 aa1.46□□□□□ -2.18
ERCC4-204ENST00000573018 CUBNO60494 3623 aa1.45□□□□□ -2.18
ERCC4-204ENST00000573018 SPINK7P58062 85 aa1.45□□□□□ -2.18
ERCC4-204ENST00000573018 LINC01554Q52M75 96 aa1.45□□□□□ -2.18
ERCC4-204ENST00000573018 Q6ZSA8 131 aa1.45□□□□□ -2.18
ERCC4-204ENST00000573018 MEGF8Q7Z7M0 2845 aa1.45□□□□□ -2.18
ERCC4-204ENST00000573018 TENM2Q9NT68 2774 aa1.45□□□□□ -2.18
ERCC4-204ENST00000573018 FCGBPQ9Y6R7 5405 aaPredicted RBP1.44□□□□□ -2.18
ERCC4-204ENST00000573018 DNAH3Q8TD57 4116 aa1.44□□□□□ -2.18
ERCC4-204ENST00000573018 A0A1B0GU33 70 aa1.44□□□□□ -2.18
ERCC4-204ENST00000573018 COX6B2Q6YFQ2 88 aa1.44□□□□□ -2.18
ERCC4-204ENST00000573018 KRTAP21-3Q3LHN1 58 aa1.43□□□□□ -2.18
ERCC4-204ENST00000573018 SRRM2Q9UQ35 2752 aaKnown RBP1.42□□□□□ -2.18
ERCC4-204ENST00000573018 A8MUU9 505 aa1.42□□□□□ -2.18
ERCC4-204ENST00000573018 C20orf166-AS1Q96NR2 134 aa1.42□□□□□ -2.18
ERCC4-204ENST00000573018 TGP01266 2768 aa1.42□□□□□ -2.18
ERCC4-204ENST00000573018 H1FX-AS1Q4G0G2 97 aa1.41□□□□□ -2.18
ERCC4-204ENST00000573018 RPL37P61927 97 aaKnown RBP1.4□□□□□ -2.19
ERCC4-204ENST00000573018 CRIPTQ9P021 101 aa1.4□□□□□ -2.19
ERCC4-204ENST00000573018 DYNC2H1Q8NCM8 4307 aaKnown RBP1.4□□□□□ -2.19
ERCC4-204ENST00000573018 HUWE1Q7Z6Z7 4374 aaKnown RBP1.4□□□□□ -2.19
ERCC4-204ENST00000573018 DNAH1Q9P2D7 4330 aa1.39□□□□□ -2.19
ERCC4-204ENST00000573018 COL7A1Q02388 2944 aa1.39□□□□□ -2.19
ERCC4-204ENST00000573018 C9orf92A6NGG3 77 aa1.39□□□□□ -2.19
ERCC4-204ENST00000573018 ROMO1P60602 79 aa1.39□□□□□ -2.19
ERCC4-204ENST00000573018 CSAG1Q6PB30 78 aa1.39□□□□□ -2.19
ERCC4-204ENST00000573018 SPINT4Q6UDR6 99 aa1.39□□□□□ -2.19
ERCC4-204ENST00000573018 S4R3F8 94 aa1.39□□□□□ -2.19
ERCC4-204ENST00000573018 HMCN1Q96RW7 5635 aa1.39□□□□□ -2.19
ERCC4-204ENST00000573018 CMYA5Q8N3K9 4069 aa1.39□□□□□ -2.19
ERCC4-204ENST00000573018 KRTAP25-1Q3LHN0 102 aa1.38□□□□□ -2.19
ERCC4-204ENST00000573018 HECTD4Q9Y4D8 3996 aa1.37□□□□□ -2.19
ERCC4-204ENST00000573018 M0QZ58 72 aa1.37□□□□□ -2.19
ERCC4-204ENST00000573018 DNAH7Q8WXX0 4024 aa1.37□□□□□ -2.19
ERCC4-204ENST00000573018 ALMS1Q8TCU4 4167 aa1.36□□□□□ -2.19
ERCC4-204ENST00000573018 DNAH6Q9C0G6 4158 aa1.36□□□□□ -2.19
ERCC4-204ENST00000573018 DNAH9Q9NYC9 4486 aa1.36□□□□□ -2.19
ERCC4-204ENST00000573018 VPS13DQ5THJ4 4388 aa1.36□□□□□ -2.19
ERCC4-204ENST00000573018 H0YAA0 97 aa1.35□□□□□ -2.19
ERCC4-204ENST00000573018 LYSTQ99698 3801 aa1.35□□□□□ -2.19
ERCC4-204ENST00000573018 PRKDCP78527 4128 aaKnown RBP1.34□□□□□ -2.19
ERCC4-204ENST00000573018 SMR3BP02814 79 aaPredicted RBP1.34□□□□□ -2.19
ERCC4-204ENST00000573018 CSMD3Q7Z407 3707 aa1.34□□□□□ -2.2
ERCC4-204ENST00000573018 PLECQ15149 4684 aaKnown RBP1.34□□□□□ -2.2
ERCC4-204ENST00000573018 DNAH10Q8IVF4 4471 aa1.34□□□□□ -2.2
ERCC4-204ENST00000573018 FBN3Q75N90 2809 aa1.34□□□□□ -2.2
ERCC4-204ENST00000573018 KRTAP6-3Q3LI67 103 aa1.33□□□□□ -2.2
ERCC4-204ENST00000573018 Q5VSD8 79 aa1.33□□□□□ -2.2
ERCC4-204ENST00000573018 DNAH17Q9UFH2 4485 aa1.32□□□□□ -2.2
ERCC4-204ENST00000573018 A0A0D9SG42 100 aa1.32□□□□□ -2.2
ERCC4-204ENST00000573018 TPRXLQ17RH7 258 aa1.32□□□□□ -2.2
ERCC4-204ENST00000573018 LUZP6Q538Z0 58 aa1.32□□□□□ -2.2
ERCC4-204ENST00000573018 R4GN34 69 aa1.32□□□□□ -2.2
ERCC4-204ENST00000573018 DMBT1Q9UGM3 2413 aaPredicted RBP1.32□□□□□ -2.2
ERCC4-204ENST00000573018 DNAH2Q9P225 4427 aa1.31□□□□□ -2.2
ERCC4-204ENST00000573018 ADM2Q7Z4H4 148 aa1.31□□□□□ -2.2
ERCC4-204ENST00000573018 STARD9Q9P2P6 4700 aa1.31□□□□□ -2.2
ERCC4-204ENST00000573018 DNAH8Q96JB1 4490 aa1.29□□□□□ -2.2
ERCC4-204ENST00000573018 FRAS1Q86XX4 4008 aa1.29□□□□□ -2.2
ERCC4-204ENST00000573018 VPS13BQ7Z7G8 4022 aa1.28□□□□□ -2.2
ERCC4-204ENST00000573018 P0C880 135 aa1.28□□□□□ -2.2
ERCC4-204ENST00000573018 FLG2Q5D862 2391 aaPredicted RBP1.28□□□□□ -2.2
ERCC4-204ENST00000573018 KMT2AQ03164 3969 aa1.28□□□□□ -2.21
ERCC4-204ENST00000573018 DNAH11Q96DT5 4516 aa1.27□□□□□ -2.21
ERCC4-204ENST00000573018 KRTAP10-4P60372 401 aaPredicted RBP1.26□□□□□ -2.21
ERCC4-204ENST00000573018 DNAH5Q8TE73 4624 aa1.26□□□□□ -2.21
ERCC4-204ENST00000573018 PKD1P98161 4303 aa1.25□□□□□ -2.21
ERCC4-204ENST00000573018 PKHD1L1Q86WI1 4243 aa1.24□□□□□ -2.21
ERCC4-204ENST00000573018 TNP1P09430 55 aa1.24□□□□□ -2.21
ERCC4-204ENST00000573018 FAT2Q9NYQ8 4349 aa1.24□□□□□ -2.21
ERCC4-204ENST00000573018 SACSQ9NZJ4 4579 aa1.23□□□□□ -2.21
ERCC4-204ENST00000573018 LRP1BQ9NZR2 4599 aa1.23□□□□□ -2.21
ERCC4-204ENST00000573018 KRTAP12-1P59990 96 aa1.23□□□□□ -2.21
ERCC4-204ENST00000573018 PLAC4Q8WY50 150 aa1.23□□□□□ -2.21
ERCC4-204ENST00000573018 PKHD1P08F94 4074 aa1.22□□□□□ -2.21
ERCC4-204ENST00000573018 KRTAP13-4Q3LI77 160 aa1.22□□□□□ -2.21
ERCC4-204ENST00000573018 APOBP04114 4563 aaKnown RBP1.22□□□□□ -2.21
ERCC4-204ENST00000573018 DYNC1H1Q14204 4646 aaKnown RBP1.2□□□□□ -2.22
ERCC4-204ENST00000573018 MT1HL1P0DM35 61 aa1.19□□□□□ -2.22
ERCC4-204ENST00000573018 C10orf95Q9H7T3 257 aa1.19□□□□□ -2.22
ERCC4-204ENST00000573018 DNHD1Q96M86 4753 aa1.18□□□□□ -2.22
ERCC4-204ENST00000573018 TNXBP22105 4242 aa1.17□□□□□ -2.22
ERCC4-204ENST00000573018 M0R2T5 61 aa1.17□□□□□ -2.22
ERCC4-204ENST00000573018 FAT3Q8TDW7 4589 aa1.16□□□□□ -2.22
ERCC4-204ENST00000573018 FAT1Q14517 4588 aa1.15□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms