RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 LINC00575Q6W349 94 aa2.83□□□□□ -1.96
GDE1-204ENST00000569773 COX6B2Q6YFQ2 88 aa2.83□□□□□ -1.96
GDE1-204ENST00000569773 TRAV13-2A0A0B4J235 113 aa2.82□□□□□ -1.96
GDE1-204ENST00000569773 TRBV7-7A0A0K0K1E9 115 aa2.82□□□□□ -1.96
GDE1-204ENST00000569773 ATP11AUNQ6ZP68 121 aa2.82□□□□□ -1.96
GDE1-204ENST00000569773 NHP2Q9NX24 153 aaKnown RBP2.82□□□□□ -1.96
GDE1-204ENST00000569773 ATP5EP56381 51 aaPredicted RBP2.81□□□□□ -1.96
GDE1-204ENST00000569773 KRTDAPP60985 99 aa2.81□□□□□ -1.96
GDE1-204ENST00000569773 Q6JHZ5 121 aa2.81□□□□□ -1.96
GDE1-204ENST00000569773 Q6ZQY7 126 aa2.81□□□□□ -1.96
GDE1-204ENST00000569773 C1orf64Q8NEQ6 169 aa2.81□□□□□ -1.96
GDE1-204ENST00000569773 A6NN06 94 aa2.8□□□□□ -1.96
GDE1-204ENST00000569773 OBSCN-AS1Q96MR7 158 aa2.8□□□□□ -1.96
GDE1-204ENST00000569773 C20orf166-AS1Q96NR2 134 aa2.8□□□□□ -1.96
GDE1-204ENST00000569773 hADV29S1A0JD25 119 aa2.79□□□□□ -1.96
GDE1-204ENST00000569773 hDV103S1A0JD37 113 aa2.79□□□□□ -1.96
GDE1-204ENST00000569773 A8MUU9 505 aa2.79□□□□□ -1.96
GDE1-204ENST00000569773 LCE3AQ5TA76 89 aa2.79□□□□□ -1.96
GDE1-204ENST00000569773 F8WEM9 126 aa2.78□□□□□ -1.96
GDE1-204ENST00000569773 MT2AP02795 61 aa2.78□□□□□ -1.96
GDE1-204ENST00000569773 RBM3P98179 157 aaKnown RBP2.78□□□□□ -1.96
GDE1-204ENST00000569773 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.78□□□□□ -1.96
GDE1-204ENST00000569773 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
GDE1-204ENST00000569773 PPDPFLQ8WWR9 84 aa2.78□□□□□ -1.96
GDE1-204ENST00000569773 Q96NJ1 140 aa2.78□□□□□ -1.96
GDE1-204ENST00000569773 MDN1Q9NU22 5596 aa2.78□□□□□ -1.96
GDE1-204ENST00000569773 TRAV7A0A075B6U4 112 aa2.77□□□□□ -1.97
GDE1-204ENST00000569773 H3BPC8 53 aa2.77□□□□□ -1.97
GDE1-204ENST00000569773 H3BUT2 72 aa2.77□□□□□ -1.97
GDE1-204ENST00000569773 ATOX1O00244 68 aa2.77□□□□□ -1.97
GDE1-204ENST00000569773 FXYD2P54710 66 aa2.77□□□□□ -1.97
GDE1-204ENST00000569773 SPATA45Q537H7 98 aa2.77□□□□□ -1.97
GDE1-204ENST00000569773 SPCS1Q9Y6A9 102 aa2.77□□□□□ -1.97
GDE1-204ENST00000569773 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
GDE1-204ENST00000569773 MT1FP04733 61 aa2.76□□□□□ -1.97
GDE1-204ENST00000569773 DEFB116Q30KQ4 102 aa2.76□□□□□ -1.97
GDE1-204ENST00000569773 H3BQ85 93 aa2.75□□□□□ -1.97
GDE1-204ENST00000569773 BVES-AS1Q5T3Y7 98 aa2.75□□□□□ -1.97
GDE1-204ENST00000569773 Q6ZQT0 140 aa2.75□□□□□ -1.97
GDE1-204ENST00000569773 SPANXA2-OT1Q8N9U9 137 aa2.75□□□□□ -1.97
GDE1-204ENST00000569773 KRTAP2-3P0C7H8 128 aa2.73□□□□□ -1.97
GDE1-204ENST00000569773 HRES1P13985 223 aa2.73□□□□□ -1.97
GDE1-204ENST00000569773 ROMO1P60602 79 aa2.73□□□□□ -1.97
GDE1-204ENST00000569773 KRTAP2-4Q9BYR9 128 aa2.73□□□□□ -1.97
GDE1-204ENST00000569773 C14orf132Q9NPU4 83 aa2.73□□□□□ -1.97
GDE1-204ENST00000569773 A0A087WSZ3 146 aa2.72□□□□□ -1.97
GDE1-204ENST00000569773 A0A1W2PNM2 257 aa2.72□□□□□ -1.97
GDE1-204ENST00000569773 A0A1W2PPM0 123 aa2.72□□□□□ -1.97
GDE1-204ENST00000569773 CCKP06307 115 aa2.72□□□□□ -1.97
GDE1-204ENST00000569773 COX8AP10176 69 aa2.72□□□□□ -1.97
GDE1-204ENST00000569773 CASC2Q6XLA1 102 aa2.72□□□□□ -1.97
GDE1-204ENST00000569773 ETDBQ3ZM63 59 aa2.71□□□□□ -1.98
GDE1-204ENST00000569773 H0YGX0 51 aa2.7□□□□□ -1.98
GDE1-204ENST00000569773 Q1T7F1 81 aa2.7□□□□□ -1.98
GDE1-204ENST00000569773 Q5W150 140 aa2.7□□□□□ -1.98
GDE1-204ENST00000569773 SERP2Q8N6R1 65 aa2.7□□□□□ -1.98
GDE1-204ENST00000569773 SPTSSBQ8NFR3 76 aa2.7□□□□□ -1.98
GDE1-204ENST00000569773 LINC00472Q9H8W2 130 aa2.7□□□□□ -1.98
GDE1-204ENST00000569773 HIGD1BQ9P298 99 aa2.7□□□□□ -1.98
GDE1-204ENST00000569773 TMEM254Q8TBM7 123 aa2.69□□□□□ -1.98
GDE1-204ENST00000569773 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
GDE1-204ENST00000569773 TRBV7-4A0A0J9YYF1 115 aa2.68□□□□□ -1.98
GDE1-204ENST00000569773 BAALC-AS2P0C853 105 aa2.68□□□□□ -1.98
GDE1-204ENST00000569773 KRTAP10-10P60014 251 aa2.68□□□□□ -1.98
GDE1-204ENST00000569773 KRTAP19-6Q3LI70 58 aa2.68□□□□□ -1.98
GDE1-204ENST00000569773 NDUFC1O43677 76 aa2.67□□□□□ -1.98
GDE1-204ENST00000569773 IGKV4-1P06312 121 aa2.67□□□□□ -1.98
GDE1-204ENST00000569773 PRO1854Q9UHT4 67 aa2.66□□□□□ -1.98
GDE1-204ENST00000569773 A0A1B0GU33 70 aa2.65□□□□□ -1.99
GDE1-204ENST00000569773 HCG22E2RYF7 251 aa2.65□□□□□ -1.99
GDE1-204ENST00000569773 MIR22HGQ0VDD5 57 aa2.65□□□□□ -1.99
GDE1-204ENST00000569773 SPRR5A0A1B0GTR4 108 aa2.64□□□□□ -1.99
GDE1-204ENST00000569773 CYP4F30PQ9H0H9 118 aa2.64□□□□□ -1.99
GDE1-204ENST00000569773 KRTAP25-1Q3LHN0 102 aa2.63□□□□□ -1.99
GDE1-204ENST00000569773 ZCCHC13Q8WW36 166 aaKnown RBP2.63□□□□□ -1.99
GDE1-204ENST00000569773 ORMDL1Q9P0S3 153 aa2.63□□□□□ -1.99
GDE1-204ENST00000569773 DSTQ03001 7570 aaKnown RBP2.62□□□□□ -1.99
GDE1-204ENST00000569773 SPINK7P58062 85 aa2.62□□□□□ -1.99
GDE1-204ENST00000569773 CDC42SE1Q9NRR8 79 aa2.61□□□□□ -1.99
GDE1-204ENST00000569773 DNAL4O96015 105 aa2.6□□□□□ -1.99
GDE1-204ENST00000569773 ACYP1P07311 99 aa2.6□□□□□ -1.99
GDE1-204ENST00000569773 CYSTM1Q9H1C7 97 aa2.6□□□□□ -1.99
GDE1-204ENST00000569773 KRTAP2-1Q9BYU5 128 aa2.59□□□□□ -1.99
GDE1-204ENST00000569773 H7BZZ5 65 aa2.58□□□□□ -2
GDE1-204ENST00000569773 P0C880 135 aa2.58□□□□□ -2
GDE1-204ENST00000569773 LINC00643Q86TS7 51 aa2.58□□□□□ -2
GDE1-204ENST00000569773 WFDC13Q8IUB5 93 aa2.58□□□□□ -2
GDE1-204ENST00000569773 SPINT4Q6UDR6 99 aa2.57□□□□□ -2
GDE1-204ENST00000569773 LINC00846Q9NV44 126 aa2.57□□□□□ -2
GDE1-204ENST00000569773 IGKV3D-7A0A0C4DH55 119 aa2.56□□□□□ -2
GDE1-204ENST00000569773 CHKB-CPT1BH3BT56 60 aa2.56□□□□□ -2
GDE1-204ENST00000569773 COX6CP09669 75 aa2.56□□□□□ -2
GDE1-204ENST00000569773 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
GDE1-204ENST00000569773 TRAV22A0A0B4J277 110 aa2.55□□□□□ -2
GDE1-204ENST00000569773 KLKP1Q107X0 134 aa2.55□□□□□ -2
GDE1-204ENST00000569773 LOC110117498A0A087WWA1 95 aa2.54□□□□□ -2
GDE1-204ENST00000569773 H1FX-AS1Q4G0G2 97 aa2.54□□□□□ -2
GDE1-204ENST00000569773 CSAG1Q6PB30 78 aa2.54□□□□□ -2
GDE1-204ENST00000569773 R4GN34 69 aa2.54□□□□□ -2
GDE1-204ENST00000569773 MMP24-AS1A0A0U1RRL7 71 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms