RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 HIVEP1P15822 2718 aa2.08□□□□□ -2.08
UBR1-208ENST00000569066 SPINK6Q6UWN8 80 aa2.08□□□□□ -2.08
UBR1-208ENST00000569066 DEFB123Q8N688 67 aa2.08□□□□□ -2.08
UBR1-208ENST00000569066 COL6A5A8TX70 2615 aa2.08□□□□□ -2.08
UBR1-208ENST00000569066 CFAP46Q8IYW2 2715 aa2.08□□□□□ -2.08
UBR1-208ENST00000569066 EPG5Q9HCE0 2579 aa2.07□□□□□ -2.08
UBR1-208ENST00000569066 CENPEQ02224 2701 aa2.06□□□□□ -2.08
UBR1-208ENST00000569066 ZNF292O60281 2723 aa2.06□□□□□ -2.08
UBR1-208ENST00000569066 ITPR2Q14571 2701 aa2.06□□□□□ -2.08
UBR1-208ENST00000569066 FRAS1Q86XX4 4008 aa2.06□□□□□ -2.08
UBR1-208ENST00000569066 LYSTQ99698 3801 aa2.05□□□□□ -2.08
UBR1-208ENST00000569066 PKD1L1Q8TDX9 2849 aa2.05□□□□□ -2.08
UBR1-208ENST00000569066 DOPEY1Q5JWR5 2465 aa2.04□□□□□ -2.08
UBR1-208ENST00000569066 CACNA1AO00555 2505 aa2.04□□□□□ -2.08
UBR1-208ENST00000569066 DEFB4AO15263 64 aa2.04□□□□□ -2.08
UBR1-208ENST00000569066 POLQO75417 2590 aa2.04□□□□□ -2.08
UBR1-208ENST00000569066 VPS13DQ5THJ4 4388 aa2.03□□□□□ -2.09
UBR1-208ENST00000569066 FBN2P35556 2912 aa2.02□□□□□ -2.09
UBR1-208ENST00000569066 ITPR3Q14573 2671 aa2.02□□□□□ -2.09
UBR1-208ENST00000569066 HTN3P15516 51 aa2.01□□□□□ -2.09
UBR1-208ENST00000569066 TGP01266 2768 aa2.01□□□□□ -2.09
UBR1-208ENST00000569066 ATRQ13535 2644 aa2.01□□□□□ -2.09
UBR1-208ENST00000569066 PIEZO1Q92508 2521 aa2□□□□□ -2.09
UBR1-208ENST00000569066 MYO9AB2RTY4 2548 aa2□□□□□ -2.09
UBR1-208ENST00000569066 ACANP16112 2415 aa1.99□□□□□ -2.09
UBR1-208ENST00000569066 ZANQ9Y493 2812 aa1.99□□□□□ -2.09
UBR1-208ENST00000569066 USP24Q9UPU5 2620 aa1.98□□□□□ -2.09
UBR1-208ENST00000569066 ANK2Q01484 3957 aa1.98□□□□□ -2.09
UBR1-208ENST00000569066 DNAH11Q96DT5 4516 aa1.98□□□□□ -2.09
UBR1-208ENST00000569066 FLNCQ14315 2725 aa1.97□□□□□ -2.09
UBR1-208ENST00000569066 DNAH8Q96JB1 4490 aa1.96□□□□□ -2.1
UBR1-208ENST00000569066 LINC01556Q5JQF7 62 aa1.96□□□□□ -2.1
UBR1-208ENST00000569066 DNAH10Q8IVF4 4471 aa1.96□□□□□ -2.1
UBR1-208ENST00000569066 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
UBR1-208ENST00000569066 CEP295Q9C0D2 2601 aa1.95□□□□□ -2.1
UBR1-208ENST00000569066 FBN3Q75N90 2809 aa1.95□□□□□ -2.1
UBR1-208ENST00000569066 TENM4Q6N022 2769 aa1.94□□□□□ -2.1
UBR1-208ENST00000569066 DEFB135Q30KP9 77 aa1.94□□□□□ -2.1
UBR1-208ENST00000569066 TEP1Q99973 2627 aaKnown RBP1.94□□□□□ -2.1
UBR1-208ENST00000569066 ANK3Q12955 4377 aaKnown RBP1.94□□□□□ -2.1
UBR1-208ENST00000569066 DNAH1Q9P2D7 4330 aa1.94□□□□□ -2.1
UBR1-208ENST00000569066 GPR98Q8WXG9 6306 aa1.94□□□□□ -2.1
UBR1-208ENST00000569066 MYCBP2O75592 4640 aa1.93□□□□□ -2.1
UBR1-208ENST00000569066 DNAH17Q9UFH2 4485 aa1.92□□□□□ -2.1
UBR1-208ENST00000569066 STAB2Q8WWQ8 2551 aa1.92□□□□□ -2.1
UBR1-208ENST00000569066 SPART-AS1P0CW21 52 aa1.92□□□□□ -2.1
UBR1-208ENST00000569066 NOTCH1P46531 2555 aa1.91□□□□□ -2.1
UBR1-208ENST00000569066 FASNP49327 2511 aaKnown RBP1.9□□□□□ -2.1
UBR1-208ENST00000569066 ANKRD11Q6UB99 2663 aaPredicted RBP1.9□□□□□ -2.11
UBR1-208ENST00000569066 ZNF469Q96JG9 3925 aaPredicted RBP1.9□□□□□ -2.11
UBR1-208ENST00000569066 H3BNG1 76 aa1.89□□□□□ -2.11
UBR1-208ENST00000569066 KMT2AQ03164 3969 aa1.88□□□□□ -2.11
UBR1-208ENST00000569066 ACACBO00763 2458 aa1.87□□□□□ -2.11
UBR1-208ENST00000569066 DEFB124Q8NES8 71 aa1.87□□□□□ -2.11
UBR1-208ENST00000569066 MYO18BQ8IUG5 2567 aa1.87□□□□□ -2.11
UBR1-208ENST00000569066 TENM1Q9UKZ4 2725 aa1.86□□□□□ -2.11
UBR1-208ENST00000569066 KRTAP10-4P60372 401 aaPredicted RBP1.85□□□□□ -2.11
UBR1-208ENST00000569066 DNAH7Q8WXX0 4024 aa1.85□□□□□ -2.11
UBR1-208ENST00000569066 TENM3Q9P273 2699 aa1.82□□□□□ -2.12
UBR1-208ENST00000569066 STAB1Q9NY15 2570 aa1.82□□□□□ -2.12
UBR1-208ENST00000569066 NSD1Q96L73 2696 aaPredicted RBP1.81□□□□□ -2.12
UBR1-208ENST00000569066 DNAH2Q9P225 4427 aa1.81□□□□□ -2.12
UBR1-208ENST00000569066 M0QZ58 72 aa1.81□□□□□ -2.12
UBR1-208ENST00000569066 KRTAP21-3Q3LHN1 58 aa1.81□□□□□ -2.12
UBR1-208ENST00000569066 HUWE1Q7Z6Z7 4374 aaKnown RBP1.81□□□□□ -2.12
UBR1-208ENST00000569066 DNAH9Q9NYC9 4486 aa1.8□□□□□ -2.12
UBR1-208ENST00000569066 FLNBO75369 2602 aaKnown RBP1.79□□□□□ -2.12
UBR1-208ENST00000569066 FLNAP21333 2647 aaKnown RBP1.79□□□□□ -2.12
UBR1-208ENST00000569066 Q5VSD8 79 aa1.79□□□□□ -2.12
UBR1-208ENST00000569066 MAST4O15021 2626 aa1.79□□□□□ -2.12
UBR1-208ENST00000569066 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.13
UBR1-208ENST00000569066 APOBP04114 4563 aaKnown RBP1.78□□□□□ -2.13
UBR1-208ENST00000569066 IGSF10Q6WRI0 2623 aa1.77□□□□□ -2.13
UBR1-208ENST00000569066 MGAM2Q2M2H8 2515 aa1.75□□□□□ -2.13
UBR1-208ENST00000569066 HECTD4Q9Y4D8 3996 aa1.74□□□□□ -2.13
UBR1-208ENST00000569066 DNAH6Q9C0G6 4158 aa1.74□□□□□ -2.13
UBR1-208ENST00000569066 CMYA5Q8N3K9 4069 aa1.73□□□□□ -2.13
UBR1-208ENST00000569066 C9orf92A6NGG3 77 aa1.73□□□□□ -2.13
UBR1-208ENST00000569066 DYNC2H1Q8NCM8 4307 aaKnown RBP1.71□□□□□ -2.14
UBR1-208ENST00000569066 DNAH3Q8TD57 4116 aa1.71□□□□□ -2.14
UBR1-208ENST00000569066 PKHD1P08F94 4074 aa1.67□□□□□ -2.14
UBR1-208ENST00000569066 SMR3AQ99954 134 aa1.66□□□□□ -2.14
UBR1-208ENST00000569066 PKHD1L1Q86WI1 4243 aa1.66□□□□□ -2.14
UBR1-208ENST00000569066 PRKDCP78527 4128 aaKnown RBP1.64□□□□□ -2.15
UBR1-208ENST00000569066 TNP1P09430 55 aa1.63□□□□□ -2.15
UBR1-208ENST00000569066 PKD1P98161 4303 aa1.62□□□□□ -2.15
UBR1-208ENST00000569066 CRCT1Q9UGL9 99 aa1.6□□□□□ -2.15
UBR1-208ENST00000569066 FAT3Q8TDW7 4589 aa1.6□□□□□ -2.15
UBR1-208ENST00000569066 LRP1Q07954 4544 aaKnown RBP1.6□□□□□ -2.15
UBR1-208ENST00000569066 RPS29P62273 56 aaKnown RBP1.6□□□□□ -2.15
UBR1-208ENST00000569066 LRP1BQ9NZR2 4599 aa1.59□□□□□ -2.15
UBR1-208ENST00000569066 VPS13BQ7Z7G8 4022 aa1.59□□□□□ -2.16
UBR1-208ENST00000569066 HSPG2P98160 4391 aa1.57□□□□□ -2.16
UBR1-208ENST00000569066 FAT2Q9NYQ8 4349 aa1.57□□□□□ -2.16
UBR1-208ENST00000569066 AHNAKQ09666 5890 aaKnown RBP1.56□□□□□ -2.16
UBR1-208ENST00000569066 FAT1Q14517 4588 aa1.56□□□□□ -2.16
UBR1-208ENST00000569066 SACSQ9NZJ4 4579 aa1.54□□□□□ -2.16
UBR1-208ENST00000569066 STARD9Q9P2P6 4700 aa1.53□□□□□ -2.16
UBR1-208ENST00000569066 PLECQ15149 4684 aaKnown RBP1.53□□□□□ -2.16
UBR1-208ENST00000569066 KRTAP2-3P0C7H8 128 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms