RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 M0QY20 66 aa1.53□□□□□ -2.16
HERPUD1-212ENST00000567944 LYNX1P0DP58 116 aa1.53□□□□□ -2.16
HERPUD1-212ENST00000567944 ABCA13Q86UQ4 5058 aa1.53□□□□□ -2.16
HERPUD1-212ENST00000567944 FLG2Q5D862 2391 aaPredicted RBP1.52□□□□□ -2.17
HERPUD1-212ENST00000567944 HERC1Q15751 4861 aa1.52□□□□□ -2.17
HERPUD1-212ENST00000567944 I3L2K1 104 aa1.52□□□□□ -2.17
HERPUD1-212ENST00000567944 WT1-ASQ06250 92 aa1.52□□□□□ -2.17
HERPUD1-212ENST00000567944 RPL39P5Q59GN2 51 aa1.52□□□□□ -2.17
HERPUD1-212ENST00000567944 MINOS1Q5TGZ0 78 aa1.52□□□□□ -2.17
HERPUD1-212ENST00000567944 DNAH2Q9P225 4427 aa1.52□□□□□ -2.17
HERPUD1-212ENST00000567944 IGLV5-48A0A075B6I7 105 aa1.51□□□□□ -2.17
HERPUD1-212ENST00000567944 A0A0G2JQZ4 141 aa1.51□□□□□ -2.17
HERPUD1-212ENST00000567944 LY6G6CO95867 125 aa1.51□□□□□ -2.17
HERPUD1-212ENST00000567944 DEFB131AP59861 70 aa1.51□□□□□ -2.17
HERPUD1-212ENST00000567944 C10orf55Q5SWW7 151 aa1.51□□□□□ -2.17
HERPUD1-212ENST00000567944 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.51□□□□□ -2.17
HERPUD1-212ENST00000567944 SSBP3-AS1Q7Z2R9 100 aa1.51□□□□□ -2.17
HERPUD1-212ENST00000567944 C5orf56Q8N8D9 126 aa1.51□□□□□ -2.17
HERPUD1-212ENST00000567944 LEAP2Q969E1 77 aa1.51□□□□□ -2.17
HERPUD1-212ENST00000567944 SRRM2Q9UQ35 2752 aaKnown RBP1.51□□□□□ -2.17
HERPUD1-212ENST00000567944 A0A087WTM6 91 aa1.5□□□□□ -2.17
HERPUD1-212ENST00000567944 PRB3Q04118 309 aaPredicted RBP1.5□□□□□ -2.17
HERPUD1-212ENST00000567944 COX6B2Q6YFQ2 88 aa1.5□□□□□ -2.17
HERPUD1-212ENST00000567944 PRO2289Q9P1D8 64 aa1.5□□□□□ -2.17
HERPUD1-212ENST00000567944 C6orf48Q9UBA6 75 aa1.5□□□□□ -2.17
HERPUD1-212ENST00000567944 NBDYA0A0U1RRE5 68 aa1.49□□□□□ -2.17
HERPUD1-212ENST00000567944 LINC00472Q9H8W2 130 aa1.49□□□□□ -2.17
HERPUD1-212ENST00000567944 CRIPTQ9P021 101 aa1.49□□□□□ -2.17
HERPUD1-212ENST00000567944 TOMM7Q9P0U1 55 aa1.49□□□□□ -2.17
HERPUD1-212ENST00000567944 PKD1P98161 4303 aa1.49□□□□□ -2.17
HERPUD1-212ENST00000567944 LRP1BQ9NZR2 4599 aa1.48□□□□□ -2.17
HERPUD1-212ENST00000567944 K7EQZ3 153 aa1.48□□□□□ -2.17
HERPUD1-212ENST00000567944 WFDC10BQ8IUB3 73 aa1.48□□□□□ -2.17
HERPUD1-212ENST00000567944 USMG5Q96IX5 58 aa1.48□□□□□ -2.17
HERPUD1-212ENST00000567944 Q96NJ1 140 aa1.48□□□□□ -2.17
HERPUD1-212ENST00000567944 APOBP04114 4563 aaKnown RBP1.47□□□□□ -2.17
HERPUD1-212ENST00000567944 WFDC13Q8IUB5 93 aa1.47□□□□□ -2.17
HERPUD1-212ENST00000567944 KAAG1Q9UBP8 84 aa1.47□□□□□ -2.17
HERPUD1-212ENST00000567944 M0R2N4 97 aa1.46□□□□□ -2.18
HERPUD1-212ENST00000567944 INE1O15225 51 aa1.46□□□□□ -2.18
HERPUD1-212ENST00000567944 COX6A2Q02221 97 aa1.46□□□□□ -2.18
HERPUD1-212ENST00000567944 MRPL34Q9BQ48 92 aaKnown RBP1.46□□□□□ -2.18
HERPUD1-212ENST00000567944 KRTAP4-1Q9BYQ7 146 aa1.46□□□□□ -2.18
HERPUD1-212ENST00000567944 CRCT1Q9UGL9 99 aa1.46□□□□□ -2.18
HERPUD1-212ENST00000567944 UBR4Q5T4S7 5183 aa1.45□□□□□ -2.18
HERPUD1-212ENST00000567944 MYCBP2O75592 4640 aa1.45□□□□□ -2.18
HERPUD1-212ENST00000567944 GVQW2A0A096LPI5 108 aaPredicted RBP1.45□□□□□ -2.18
HERPUD1-212ENST00000567944 KLK9Q2XQG4 91 aa1.45□□□□□ -2.18
HERPUD1-212ENST00000567944 PCOTHQ58A44 107 aa1.45□□□□□ -2.18
HERPUD1-212ENST00000567944 Q6ZRX8 168 aa1.45□□□□□ -2.18
HERPUD1-212ENST00000567944 PLAC4Q8WY50 150 aa1.45□□□□□ -2.18
HERPUD1-212ENST00000567944 FAT1Q14517 4588 aa1.45□□□□□ -2.18
HERPUD1-212ENST00000567944 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
HERPUD1-212ENST00000567944 H3BUA1 57 aa1.44□□□□□ -2.18
HERPUD1-212ENST00000567944 H3BUX3 64 aa1.44□□□□□ -2.18
HERPUD1-212ENST00000567944 SPINK13Q1W4C9 94 aa1.44□□□□□ -2.18
HERPUD1-212ENST00000567944 C10orf99Q6UWK7 81 aa1.44□□□□□ -2.18
HERPUD1-212ENST00000567944 VPS13BQ7Z7G8 4022 aa1.43□□□□□ -2.18
HERPUD1-212ENST00000567944 UBE2DNLQ8IWF7 75 aa1.42□□□□□ -2.18
HERPUD1-212ENST00000567944 DNAH5Q8TE73 4624 aa1.42□□□□□ -2.18
HERPUD1-212ENST00000567944 HMCN2Q8NDA2 5059 aa1.41□□□□□ -2.18
HERPUD1-212ENST00000567944 PKHD1L1Q86WI1 4243 aa1.41□□□□□ -2.18
HERPUD1-212ENST00000567944 MMP24-AS1A0A0U1RRL7 71 aa1.39□□□□□ -2.19
HERPUD1-212ENST00000567944 G3V318 75 aa1.39□□□□□ -2.19
HERPUD1-212ENST00000567944 APELAP0DMC3 54 aa1.39□□□□□ -2.19
HERPUD1-212ENST00000567944 KRTAP12-1P59990 96 aa1.39□□□□□ -2.19
HERPUD1-212ENST00000567944 RPL37P61927 97 aaKnown RBP1.39□□□□□ -2.19
HERPUD1-212ENST00000567944 DEFB105AQ8NG35 78 aa1.39□□□□□ -2.19
HERPUD1-212ENST00000567944 DEFB104AQ8WTQ1 72 aa1.39□□□□□ -2.19
HERPUD1-212ENST00000567944 TNXBP22105 4242 aa1.38□□□□□ -2.19
HERPUD1-212ENST00000567944 LRP1Q07954 4544 aaKnown RBP1.38□□□□□ -2.19
HERPUD1-212ENST00000567944 DEFB136Q30KP8 78 aa1.38□□□□□ -2.19
HERPUD1-212ENST00000567944 RHPN1-AS1Q9BWJ2 59 aa1.38□□□□□ -2.19
HERPUD1-212ENST00000567944 LRP2P98164 4655 aa1.37□□□□□ -2.19
HERPUD1-212ENST00000567944 A8MTW9 85 aa1.37□□□□□ -2.19
HERPUD1-212ENST00000567944 TPRXLQ17RH7 258 aa1.37□□□□□ -2.19
HERPUD1-212ENST00000567944 KRTAP13-4Q3LI77 160 aa1.37□□□□□ -2.19
HERPUD1-212ENST00000567944 H1FX-AS1Q4G0G2 97 aa1.37□□□□□ -2.19
HERPUD1-212ENST00000567944 SPACA4Q8TDM5 124 aa1.37□□□□□ -2.19
HERPUD1-212ENST00000567944 FAT3Q8TDW7 4589 aa1.36□□□□□ -2.19
HERPUD1-212ENST00000567944 DNAH8Q96JB1 4490 aa1.36□□□□□ -2.19
HERPUD1-212ENST00000567944 NOP10Q9NPE3 64 aaKnown RBP1.36□□□□□ -2.19
HERPUD1-212ENST00000567944 APLNQ9ULZ1 77 aa1.36□□□□□ -2.19
HERPUD1-212ENST00000567944 H0YAA0 97 aa1.35□□□□□ -2.19
HERPUD1-212ENST00000567944 CLPSL2Q6UWE3 100 aa1.35□□□□□ -2.19
HERPUD1-212ENST00000567944 Q6ZRN7 208 aaPredicted RBP1.35□□□□□ -2.19
HERPUD1-212ENST00000567944 RNF213Q63HN8 5207 aa1.34□□□□□ -2.19
HERPUD1-212ENST00000567944 HTN1P15515 57 aa1.34□□□□□ -2.19
HERPUD1-212ENST00000567944 SPRR1AP35321 89 aa1.34□□□□□ -2.19
HERPUD1-212ENST00000567944 UNQ6190/PRO20217Q6UXQ8 127 aa1.34□□□□□ -2.19
HERPUD1-212ENST00000567944 Q6ZSA8 131 aa1.34□□□□□ -2.19
HERPUD1-212ENST00000567944 SPRR1BP22528 89 aa1.33□□□□□ -2.2
HERPUD1-212ENST00000567944 PRLHP81277 87 aa1.33□□□□□ -2.2
HERPUD1-212ENST00000567944 DEFB130BP0DP73 79 aa1.32□□□□□ -2.2
HERPUD1-212ENST00000567944 DEFB130AP0DP74 79 aa1.32□□□□□ -2.2
HERPUD1-212ENST00000567944 FAT4Q6V0I7 4981 aa1.31□□□□□ -2.2
HERPUD1-212ENST00000567944 Q5VSD8 79 aa1.31□□□□□ -2.2
HERPUD1-212ENST00000567944 PRO0255Q9UI72 69 aa1.31□□□□□ -2.2
HERPUD1-212ENST00000567944 KRTAP10-4P60372 401 aaPredicted RBP1.3□□□□□ -2.2
HERPUD1-212ENST00000567944 DEFB135Q30KP9 77 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms