RNA–Protein interactions for RNA: ENST00000565936.1

LINC01043-201, Transcript of long intergenic non-protein coding RNA 1043, humanhuman

TSL 1 (best) BASIC

Gene LINC01043, Length 6,897 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01043-201ENST00000565936 CRCT1Q9UGL9 99 aa2.8□□□□□ -1.96
LINC01043-201ENST00000565936 KRTAP12-3P60328 96 aa2.78□□□□□ -1.96
LINC01043-201ENST00000565936 KRTAP8-1Q8IUC2 63 aa2.77□□□□□ -1.97
LINC01043-201ENST00000565936 MT1HP80294 61 aa2.77□□□□□ -1.97
LINC01043-201ENST00000565936 DNAH10Q8IVF4 4471 aa2.76□□□□□ -1.97
LINC01043-201ENST00000565936 DNAH11Q96DT5 4516 aa2.75□□□□□ -1.97
LINC01043-201ENST00000565936 ZNF469Q96JG9 3925 aaPredicted RBP2.73□□□□□ -1.97
LINC01043-201ENST00000565936 DNAH5Q8TE73 4624 aa2.73□□□□□ -1.97
LINC01043-201ENST00000565936 DNHD1Q96M86 4753 aa2.71□□□□□ -1.98
LINC01043-201ENST00000565936 LCE3AQ5TA76 89 aa2.71□□□□□ -1.98
LINC01043-201ENST00000565936 KRTAP4-1Q9BYQ7 146 aa2.71□□□□□ -1.98
LINC01043-201ENST00000565936 DNAH2Q9P225 4427 aa2.7□□□□□ -1.98
LINC01043-201ENST00000565936 LORP23490 312 aaPredicted RBP2.69□□□□□ -1.98
LINC01043-201ENST00000565936 MT2AP02795 61 aa2.69□□□□□ -1.98
LINC01043-201ENST00000565936 VPS13DQ5THJ4 4388 aa2.69□□□□□ -1.98
LINC01043-201ENST00000565936 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
LINC01043-201ENST00000565936 PLECQ15149 4684 aaKnown RBP2.66□□□□□ -1.98
LINC01043-201ENST00000565936 CMYA5Q8N3K9 4069 aa2.66□□□□□ -1.98
LINC01043-201ENST00000565936 DNAH17Q9UFH2 4485 aa2.65□□□□□ -1.99
LINC01043-201ENST00000565936 FAT2Q9NYQ8 4349 aa2.65□□□□□ -1.99
LINC01043-201ENST00000565936 CSMD3Q7Z407 3707 aa2.63□□□□□ -1.99
LINC01043-201ENST00000565936 DYNC2H1Q8NCM8 4307 aaKnown RBP2.63□□□□□ -1.99
LINC01043-201ENST00000565936 DYNC1H1Q14204 4646 aaKnown RBP2.63□□□□□ -1.99
LINC01043-201ENST00000565936 DNAH3Q8TD57 4116 aa2.62□□□□□ -1.99
LINC01043-201ENST00000565936 MT1FP04733 61 aa2.61□□□□□ -1.99
LINC01043-201ENST00000565936 ANK2Q01484 3957 aa2.61□□□□□ -1.99
LINC01043-201ENST00000565936 KRTAP19-4Q3LI73 84 aa2.61□□□□□ -1.99
LINC01043-201ENST00000565936 DNAH6Q9C0G6 4158 aa2.6□□□□□ -1.99
LINC01043-201ENST00000565936 LRP1BQ9NZR2 4599 aa2.59□□□□□ -1.99
LINC01043-201ENST00000565936 KRTAP10-5P60370 271 aa2.59□□□□□ -2
LINC01043-201ENST00000565936 STARD9Q9P2P6 4700 aa2.58□□□□□ -2
LINC01043-201ENST00000565936 SPRR2FQ96RM1 72 aa2.57□□□□□ -2
LINC01043-201ENST00000565936 FRAS1Q86XX4 4008 aa2.57□□□□□ -2
LINC01043-201ENST00000565936 KRTAP10-7P60409 375 aaPredicted RBP2.56□□□□□ -2
LINC01043-201ENST00000565936 MYCBP2O75592 4640 aa2.55□□□□□ -2
LINC01043-201ENST00000565936 KIAA1109Q2LD37 5005 aa2.55□□□□□ -2
LINC01043-201ENST00000565936 SACSQ9NZJ4 4579 aa2.54□□□□□ -2
LINC01043-201ENST00000565936 DNAH8Q96JB1 4490 aa2.52□□□□□ -2.01
LINC01043-201ENST00000565936 PRKDCP78527 4128 aaKnown RBP2.52□□□□□ -2.01
LINC01043-201ENST00000565936 LYSTQ99698 3801 aa2.51□□□□□ -2.01
LINC01043-201ENST00000565936 RYR2Q92736 4967 aa2.51□□□□□ -2.01
LINC01043-201ENST00000565936 KRTAP19-8Q3LI54 63 aa2.51□□□□□ -2.01
LINC01043-201ENST00000565936 RYR1P21817 5038 aa2.5□□□□□ -2.01
LINC01043-201ENST00000565936 FAT1Q14517 4588 aa2.49□□□□□ -2.01
LINC01043-201ENST00000565936 DNAH7Q8WXX0 4024 aa2.49□□□□□ -2.01
LINC01043-201ENST00000565936 KRTAP19-5Q3LI72 72 aa2.48□□□□□ -2.01
LINC01043-201ENST00000565936 HERC1Q15751 4861 aa2.47□□□□□ -2.01
LINC01043-201ENST00000565936 SPRR2EP22531 72 aa2.47□□□□□ -2.01
LINC01043-201ENST00000565936 SPRR2BP35325 72 aa2.47□□□□□ -2.01
LINC01043-201ENST00000565936 SPRR2AP35326 72 aa2.47□□□□□ -2.01
LINC01043-201ENST00000565936 KRTAP17-1Q9BYP8 105 aa2.46□□□□□ -2.02
LINC01043-201ENST00000565936 KMT2AQ03164 3969 aa2.44□□□□□ -2.02
LINC01043-201ENST00000565936 RYR3Q15413 4870 aa2.44□□□□□ -2.02
LINC01043-201ENST00000565936 FAT3Q8TDW7 4589 aa2.44□□□□□ -2.02
LINC01043-201ENST00000565936 LCE3CQ5T5A8 94 aa2.44□□□□□ -2.02
LINC01043-201ENST00000565936 VPS13BQ7Z7G8 4022 aa2.43□□□□□ -2.02
LINC01043-201ENST00000565936 KRTAP19-1Q8IUB9 90 aa2.43□□□□□ -2.02
LINC01043-201ENST00000565936 HSPG2P98160 4391 aa2.43□□□□□ -2.02
LINC01043-201ENST00000565936 KRTAP9-8Q9BYQ0 159 aa2.41□□□□□ -2.02
LINC01043-201ENST00000565936 HYDINQ4G0P3 5121 aa2.41□□□□□ -2.02
LINC01043-201ENST00000565936 APOBP04114 4563 aaKnown RBP2.41□□□□□ -2.02
LINC01043-201ENST00000565936 SPRR2DP22532 72 aa2.4□□□□□ -2.03
LINC01043-201ENST00000565936 LCE2BO14633 110 aa2.38□□□□□ -2.03
LINC01043-201ENST00000565936 LRP1Q07954 4544 aaKnown RBP2.38□□□□□ -2.03
LINC01043-201ENST00000565936 KRTAP9-3Q9BYQ3 159 aa2.38□□□□□ -2.03
LINC01043-201ENST00000565936 LCE2CQ5TA81 110 aa2.37□□□□□ -2.03
LINC01043-201ENST00000565936 PKHD1L1Q86WI1 4243 aa2.37□□□□□ -2.03
LINC01043-201ENST00000565936 MT1BP07438 61 aa2.37□□□□□ -2.03
LINC01043-201ENST00000565936 MT1XP80297 61 aa2.37□□□□□ -2.03
LINC01043-201ENST00000565936 BIRC6Q9NR09 4857 aa2.37□□□□□ -2.03
LINC01043-201ENST00000565936 HERC2O95714 4834 aa2.34□□□□□ -2.03
LINC01043-201ENST00000565936 MT1GP13640 62 aa2.33□□□□□ -2.04
LINC01043-201ENST00000565936 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
LINC01043-201ENST00000565936 KMT2CQ8NEZ4 4911 aaKnown RBP2.31□□□□□ -2.04
LINC01043-201ENST00000565936 HECTD4Q9Y4D8 3996 aa2.31□□□□□ -2.04
LINC01043-201ENST00000565936 ABCA13Q86UQ4 5058 aa2.3□□□□□ -2.04
LINC01043-201ENST00000565936 PKD1P98161 4303 aa2.29□□□□□ -2.04
LINC01043-201ENST00000565936 LCE2DQ5TA82 110 aaPredicted RBP2.28□□□□□ -2.04
LINC01043-201ENST00000565936 EPPK1P58107 5090 aaKnown RBP2.27□□□□□ -2.05
LINC01043-201ENST00000565936 KRTAP9-2Q9BYQ4 174 aa2.27□□□□□ -2.05
LINC01043-201ENST00000565936 KRTAP19-6Q3LI70 58 aa2.24□□□□□ -2.05
LINC01043-201ENST00000565936 KRTAP19-2Q3LHN2 52 aa2.24□□□□□ -2.05
LINC01043-201ENST00000565936 KRTAP19-3Q7Z4W3 81 aa2.23□□□□□ -2.05
LINC01043-201ENST00000565936 PCLOQ9Y6V0 5065 aa2.23□□□□□ -2.05
LINC01043-201ENST00000565936 KRTAP4-8A0A0G2JLE6 195 aa2.22□□□□□ -2.05
LINC01043-201ENST00000565936 KRTAP4-8Q9BYQ9 185 aa2.22□□□□□ -2.05
LINC01043-201ENST00000565936 SPRR5A0A1B0GTR4 108 aa2.21□□□□□ -2.06
LINC01043-201ENST00000565936 LCE3BQ5TA77 95 aa2.21□□□□□ -2.06
LINC01043-201ENST00000565936 LRP2P98164 4655 aa2.2□□□□□ -2.06
LINC01043-201ENST00000565936 KRTAP9-6A0A140TA67 174 aa2.2□□□□□ -2.06
LINC01043-201ENST00000565936 PKHD1P08F94 4074 aa2.2□□□□□ -2.06
LINC01043-201ENST00000565936 LCE2AQ5TA79 106 aaPredicted RBP2.18□□□□□ -2.06
LINC01043-201ENST00000565936 MT1LQ93083 61 aa2.17□□□□□ -2.06
LINC01043-201ENST00000565936 MUC17Q685J3 4493 aa2.16□□□□□ -2.06
LINC01043-201ENST00000565936 MT1EP04732 61 aa2.16□□□□□ -2.06
LINC01043-201ENST00000565936 TNXBP22105 4242 aa2.15□□□□□ -2.07
LINC01043-201ENST00000565936 RNF213Q63HN8 5207 aa2.14□□□□□ -2.07
LINC01043-201ENST00000565936 FLGP20930 4061 aaPredicted RBP2.12□□□□□ -2.07
LINC01043-201ENST00000565936 HMCN2Q8NDA2 5059 aa2.12□□□□□ -2.07
LINC01043-201ENST00000565936 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms