RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 ZC3H13Q5T200 1668 aaKnown RBP0.01□□□□□ -2.41
CHD9-211ENST00000564600 CFAP43Q8NDM7 1665 aa0.01□□□□□ -2.41
CHD9-211ENST00000564600 RGPD1P0DJD0 1748 aa0.01□□□□□ -2.41
CHD9-211ENST00000564600 HECTD4Q9Y4D8 3996 aa0□□□□□ -2.41
CHD9-211ENST00000564600 DNHD1Q96M86 4753 aa0□□□□□ -2.41
CHD9-211ENST00000564600 MT1FP04733 61 aa0□□□□□ -2.41
CHD9-211ENST00000564600 C4AP0C0L4 1744 aa0□□□□□ -2.41
CHD9-211ENST00000564600 C4BP0C0L5 1744 aa0□□□□□ -2.41
CHD9-211ENST00000564600 DMDP11532 3685 aa0□□□□□ -2.41
CHD9-211ENST00000564600 MT1GP13640 62 aa0□□□□□ -2.41
CHD9-211ENST00000564600 RPS27P42677 84 aaKnown RBP0□□□□□ -2.41
CHD9-211ENST00000564600 RPS29P62273 56 aaKnown RBP0□□□□□ -2.41
CHD9-211ENST00000564600 KRTAP19-7Q3SYF9 63 aa0□□□□□ -2.41
CHD9-211ENST00000564600 RPS27LQ71UM5 84 aaKnown RBP0□□□□□ -2.41
CHD9-211ENST00000564600 NRAPQ86VF7 1730 aa0□□□□□ -2.41
CHD9-211ENST00000564600 MADDQ8WXG6 1647 aa0□□□□□ -2.41
CHD9-211ENST00000564600 UGGT2Q9NYU1 1516 aa0□□□□□ -2.41
CHD9-211ENST00000564600 EIF2AK4Q9P2K8 1649 aaKnown RBP0□□□□□ -2.41
CHD9-211ENST00000564600 FAT3Q8TDW7 4589 aa-0□□□□□ -2.41
CHD9-211ENST00000564600 VPS13BQ7Z7G8 4022 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 DNAH7Q8WXX0 4024 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 ANKRD36CQ5JPF3 1778 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 UBR1Q8IWV7 1749 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 DOT1LQ8TEK3 1739 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 TOGARAM1Q9Y4F4 1720 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 PLCH1Q4KWH8 1693 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 ZNF831Q5JPB2 1677 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 RNF17Q9BXT8 1623 aaKnown RBP-0.01□□□□□ -2.41
CHD9-211ENST00000564600 CDC42BPGQ6DT37 1551 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 INO80Q9ULG1 1556 aaPredicted RBP-0.01□□□□□ -2.41
CHD9-211ENST00000564600 NFAT5O94916 1531 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 CPS1P31327 1500 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 CLASP1Q7Z460 1538 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 CD163L1Q9NR16 1453 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 DNAH6Q9C0G6 4158 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 PRKDCP78527 4128 aaKnown RBP-0.01□□□□□ -2.41
CHD9-211ENST00000564600 MT2AP02795 61 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 SFTA3P0C7M3 94 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 CD52P31358 61 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 DEFB1P60022 68 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 MT1HP80294 61 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 KRTAP20-2Q3LI61 65 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 MT1MQ8N339 61 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 CMC2Q9NRP2 79 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 LRP2P98164 4655 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 LY75O60449 1722 aa-0.01□□□□□ -2.41
CHD9-211ENST00000564600 PKHD1P08F94 4074 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 TMEM131LA2VDJ0 1609 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 MROH1Q8NDA8 1641 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 UGGT1Q9NYU2 1555 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 MAST1Q9Y2H9 1570 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 EFCAB5A4FU69 1503 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 FAT1Q14517 4588 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 ASXL1Q8IXJ9 1541 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 PRXQ9BXM0 1461 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 AKAP9Q99996 3911 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 LINC01546A6NGU7 62 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 WFDC10BQ8IUB3 73 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 KRTAP8-1Q8IUC2 63 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 SPRR2FQ96RM1 72 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 KAAG1Q9UBP8 84 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 HSPG2P98160 4391 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 A0A1B0GUL6 1792 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 RICTORQ6R327 1708 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 NHSQ6T4R5 1651 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 ADCY10Q96PN6 1610 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 DIP2AQ14689 1571 aa-0.02□□□□□ -2.41
CHD9-211ENST00000564600 DYNC1H1Q14204 4646 aaKnown RBP-0.02□□□□□ -2.41
CHD9-211ENST00000564600 TJP1Q07157 1748 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 MT1EP04732 61 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 MT1XP80297 61 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 KRTAP19-8Q3LI54 63 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 KRTAP6-2Q3LI66 62 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 MT1LQ93083 61 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 SMIM2Q9BVW6 85 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 C3P01024 1663 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 LMO7Q8WWI1 1683 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 ITSN2Q9NZM3 1697 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 LRP1BQ9NZR2 4599 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 ABCA6Q8N139 1617 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 NRXN3Q9Y4C0 1643 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 ABCA8O94911 1581 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 DNAH1Q9P2D7 4330 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 PLECQ15149 4684 aaKnown RBP-0.03□□□□□ -2.41
CHD9-211ENST00000564600 TNXBP22105 4242 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 AGLP35573 1532 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 ATP7AQ04656 1500 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 ERICH3Q5RHP9 1530 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 DNAH3Q8TD57 4116 aa-0.03□□□□□ -2.41
CHD9-211ENST00000564600 MYO5CQ9NQX4 1742 aa-0.04□□□□□ -2.42
CHD9-211ENST00000564600 PARP4Q9UKK3 1724 aaKnown RBP-0.04□□□□□ -2.42
CHD9-211ENST00000564600 STARD9Q9P2P6 4700 aa-0.04□□□□□ -2.42
CHD9-211ENST00000564600 KIF1AQ12756 1690 aa-0.04□□□□□ -2.42
CHD9-211ENST00000564600 MYCBP2O75592 4640 aa-0.04□□□□□ -2.42
CHD9-211ENST00000564600 SACSQ9NZJ4 4579 aa-0.04□□□□□ -2.42
CHD9-211ENST00000564600 IGIPA6NJ69 53 aa-0.04□□□□□ -2.42
CHD9-211ENST00000564600 SMR3BP02814 79 aaPredicted RBP-0.04□□□□□ -2.42
CHD9-211ENST00000564600 TFF3Q07654 80 aa-0.04□□□□□ -2.42
CHD9-211ENST00000564600 DEFB136Q30KP8 78 aa-0.04□□□□□ -2.42
CHD9-211ENST00000564600 COX14Q96I36 57 aa-0.04□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms