RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 MRPL34Q9BQ48 92 aaKnown RBP0.67□□□□□ -2.3
CHD9-209ENST00000564255 CDKN2A-AS1Q9UH64 79 aa0.67□□□□□ -2.3
CHD9-209ENST00000564255 TIMM8BQ9Y5J9 83 aaPredicted RBP0.67□□□□□ -2.3
CHD9-209ENST00000564255 LINC00158P58513 81 aa0.66□□□□□ -2.3
CHD9-209ENST00000564255 Q8IZM0 81 aa0.66□□□□□ -2.3
CHD9-209ENST00000564255 DEFB104AQ8WTQ1 72 aa0.66□□□□□ -2.3
CHD9-209ENST00000564255 TENM2Q9NT68 2774 aa0.66□□□□□ -2.3
CHD9-209ENST00000564255 CRYBG3Q68DQ2 2970 aa0.66□□□□□ -2.3
CHD9-209ENST00000564255 TENM3Q9P273 2699 aa0.66□□□□□ -2.3
CHD9-209ENST00000564255 DNAH9Q9NYC9 4486 aa0.66□□□□□ -2.3
CHD9-209ENST00000564255 WDFY3Q8IZQ1 3526 aa0.66□□□□□ -2.3
CHD9-209ENST00000564255 DMBT1Q9UGM3 2413 aaPredicted RBP0.66□□□□□ -2.3
CHD9-209ENST00000564255 LYNX1G3V0Z9 82 aa0.66□□□□□ -2.3
CHD9-209ENST00000564255 PIGYQ3MUY2 71 aa0.66□□□□□ -2.3
CHD9-209ENST00000564255 DEFB108BQ8NET1 73 aa0.66□□□□□ -2.3
CHD9-209ENST00000564255 HUWE1Q7Z6Z7 4374 aaKnown RBP0.66□□□□□ -2.3
CHD9-209ENST00000564255 CSMD1Q96PZ7 3565 aa0.65□□□□□ -2.3
CHD9-209ENST00000564255 FAT2Q9NYQ8 4349 aa0.65□□□□□ -2.3
CHD9-209ENST00000564255 COX6A2Q02221 97 aa0.65□□□□□ -2.31
CHD9-209ENST00000564255 DEFB106AQ8N104 65 aa0.65□□□□□ -2.31
CHD9-209ENST00000564255 CNFNQ9BYD5 112 aa0.65□□□□□ -2.31
CHD9-209ENST00000564255 TMEM167BQ9NRX6 74 aa0.65□□□□□ -2.31
CHD9-209ENST00000564255 HSPG2P98160 4391 aa0.65□□□□□ -2.31
CHD9-209ENST00000564255 PLCE1Q9P212 2302 aa0.65□□□□□ -2.31
CHD9-209ENST00000564255 HMCN2Q8NDA2 5059 aa0.65□□□□□ -2.31
CHD9-209ENST00000564255 TRRAPQ9Y4A5 3859 aa0.65□□□□□ -2.31
CHD9-209ENST00000564255 DEFB110Q30KQ9 67 aa0.65□□□□□ -2.31
CHD9-209ENST00000564255 Q5VSD8 79 aa0.65□□□□□ -2.31
CHD9-209ENST00000564255 C10orf95Q9H7T3 257 aa0.65□□□□□ -2.31
CHD9-209ENST00000564255 LAMA5O15230 3695 aa0.65□□□□□ -2.31
CHD9-209ENST00000564255 H0YAA0 97 aa0.64□□□□□ -2.31
CHD9-209ENST00000564255 H0YGG7 62 aa0.64□□□□□ -2.31
CHD9-209ENST00000564255 CCL22O00626 93 aa0.64□□□□□ -2.31
CHD9-209ENST00000564255 LELP1Q5T871 98 aa0.64□□□□□ -2.31
CHD9-209ENST00000564255 DNAH10Q8IVF4 4471 aa0.64□□□□□ -2.31
CHD9-209ENST00000564255 DCHS2Q6V1P9 2916 aa0.64□□□□□ -2.31
CHD9-209ENST00000564255 LINC00308Q8TCZ7 52 aa0.63□□□□□ -2.31
CHD9-209ENST00000564255 CMYA5Q8N3K9 4069 aa0.63□□□□□ -2.31
CHD9-209ENST00000564255 KRTAP4-1Q9BYQ7 146 aa0.63□□□□□ -2.31
CHD9-209ENST00000564255 PRO0255Q9UI72 69 aa0.63□□□□□ -2.31
CHD9-209ENST00000564255 WNK2Q9Y3S1 2297 aa0.62□□□□□ -2.31
CHD9-209ENST00000564255 ZNF469Q96JG9 3925 aaPredicted RBP0.62□□□□□ -2.31
CHD9-209ENST00000564255 STAB2Q8WWQ8 2551 aa0.62□□□□□ -2.31
CHD9-209ENST00000564255 LAMA1P25391 3075 aa0.62□□□□□ -2.31
CHD9-209ENST00000564255 PKHD1L1Q86WI1 4243 aa0.62□□□□□ -2.31
CHD9-209ENST00000564255 STARD9Q9P2P6 4700 aa0.62□□□□□ -2.31
CHD9-209ENST00000564255 PLECQ15149 4684 aaKnown RBP0.62□□□□□ -2.31
CHD9-209ENST00000564255 TACC2O95359 2948 aa0.62□□□□□ -2.31
CHD9-209ENST00000564255 DNAH6Q9C0G6 4158 aa0.62□□□□□ -2.31
CHD9-209ENST00000564255 VPS13CQ709C8 3753 aa0.62□□□□□ -2.31
CHD9-209ENST00000564255 PRB3Q04118 309 aaPredicted RBP0.62□□□□□ -2.31
CHD9-209ENST00000564255 SPINK9Q5DT21 86 aa0.62□□□□□ -2.31
CHD9-209ENST00000564255 MINOS1Q5TGZ0 78 aa0.62□□□□□ -2.31
CHD9-209ENST00000564255 SMIM2Q9BVW6 85 aa0.62□□□□□ -2.31
CHD9-209ENST00000564255 APLNQ9ULZ1 77 aa0.62□□□□□ -2.31
CHD9-209ENST00000564255 MYCBP2O75592 4640 aa0.61□□□□□ -2.31
CHD9-209ENST00000564255 CUBNO60494 3623 aa0.61□□□□□ -2.31
CHD9-209ENST00000564255 C6orf48Q9UBA6 75 aa0.61□□□□□ -2.31
CHD9-209ENST00000564255 DNAH17Q9UFH2 4485 aa0.61□□□□□ -2.31
CHD9-209ENST00000564255 PKHD1P08F94 4074 aa0.61□□□□□ -2.31
CHD9-209ENST00000564255 NDUFA1O15239 70 aa0.61□□□□□ -2.31
CHD9-209ENST00000564255 SPRR1AP35321 89 aa0.61□□□□□ -2.31
CHD9-209ENST00000564255 DNAH2Q9P225 4427 aa0.6□□□□□ -2.31
CHD9-209ENST00000564255 H3BUX3 64 aa0.6□□□□□ -2.31
CHD9-209ENST00000564255 H1FX-AS1Q4G0G2 97 aa0.6□□□□□ -2.31
CHD9-209ENST00000564255 HECTD4Q9Y4D8 3996 aa0.6□□□□□ -2.31
CHD9-209ENST00000564255 COL7A1Q02388 2944 aa0.6□□□□□ -2.31
CHD9-209ENST00000564255 RNF213Q63HN8 5207 aa0.6□□□□□ -2.31
CHD9-209ENST00000564255 DEFB105AQ8NG35 78 aa0.59□□□□□ -2.31
CHD9-209ENST00000564255 A0A0D9SG42 100 aa0.59□□□□□ -2.32
CHD9-209ENST00000564255 IAPPP10997 89 aa0.59□□□□□ -2.32
CHD9-209ENST00000564255 KAAG1Q9UBP8 84 aa0.59□□□□□ -2.32
CHD9-209ENST00000564255 VPS13DQ5THJ4 4388 aa0.59□□□□□ -2.32
CHD9-209ENST00000564255 RPS27P42677 84 aaKnown RBP0.59□□□□□ -2.32
CHD9-209ENST00000564255 RPS27LQ71UM5 84 aaKnown RBP0.59□□□□□ -2.32
CHD9-209ENST00000564255 WFDC13Q8IUB5 93 aa0.59□□□□□ -2.32
CHD9-209ENST00000564255 H3BSH0 61 aa0.58□□□□□ -2.32
CHD9-209ENST00000564255 MT1HL1P0DM35 61 aa0.58□□□□□ -2.32
CHD9-209ENST00000564255 DEFB130BP0DP73 79 aa0.58□□□□□ -2.32
CHD9-209ENST00000564255 DEFB130AP0DP74 79 aa0.58□□□□□ -2.32
CHD9-209ENST00000564255 APOBP04114 4563 aaKnown RBP0.57□□□□□ -2.32
CHD9-209ENST00000564255 SPRR1BP22528 89 aa0.57□□□□□ -2.32
CHD9-209ENST00000564255 SVEP1Q4LDE5 3571 aa0.57□□□□□ -2.32
CHD9-209ENST00000564255 FAT1Q14517 4588 aa0.57□□□□□ -2.32
CHD9-209ENST00000564255 HRNRQ86YZ3 2850 aaPredicted RBP0.57□□□□□ -2.32
CHD9-209ENST00000564255 LYSTQ99698 3801 aa0.57□□□□□ -2.32
CHD9-209ENST00000564255 SMR3BP02814 79 aaPredicted RBP0.56□□□□□ -2.32
CHD9-209ENST00000564255 VPS13BQ7Z7G8 4022 aa0.56□□□□□ -2.32
CHD9-209ENST00000564255 DNAH5Q8TE73 4624 aa0.56□□□□□ -2.32
CHD9-209ENST00000564255 SRRM2Q9UQ35 2752 aaKnown RBP0.56□□□□□ -2.32
CHD9-209ENST00000564255 IGLV5-48A0A075B6I7 105 aa0.55□□□□□ -2.32
CHD9-209ENST00000564255 WT1-ASQ06250 92 aa0.55□□□□□ -2.32
CHD9-209ENST00000564255 WFDC10BQ8IUB3 73 aa0.55□□□□□ -2.32
CHD9-209ENST00000564255 H3BUA1 57 aa0.55□□□□□ -2.32
CHD9-209ENST00000564255 CSMD3Q7Z407 3707 aa0.55□□□□□ -2.32
CHD9-209ENST00000564255 KLK9Q2XQG4 91 aa0.55□□□□□ -2.32
CHD9-209ENST00000564255 FRAS1Q86XX4 4008 aa0.54□□□□□ -2.32
CHD9-209ENST00000564255 LRP2P98164 4655 aa0.54□□□□□ -2.32
CHD9-209ENST00000564255 TNXBP22105 4242 aa0.54□□□□□ -2.32
CHD9-209ENST00000564255 SPART-AS1P0CW21 52 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms