RNA–Protein interactions for RNA: ENST00000561863.1

DENND4A-203, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-203ENST00000561863 HECTD4Q9Y4D8 3996 aa0.69□□□□□ -2.3
DENND4A-203ENST00000561863 DNAH9Q9NYC9 4486 aa0.69□□□□□ -2.3
DENND4A-203ENST00000561863 STAB1Q9NY15 2570 aa0.69□□□□□ -2.3
DENND4A-203ENST00000561863 DMXL2Q8TDJ6 3036 aa0.69□□□□□ -2.3
DENND4A-203ENST00000561863 LRRK2Q5S007 2527 aa0.69□□□□□ -2.3
DENND4A-203ENST00000561863 ITPR3Q14573 2671 aa0.69□□□□□ -2.3
DENND4A-203ENST00000561863 FLGP20930 4061 aaPredicted RBP0.69□□□□□ -2.3
DENND4A-203ENST00000561863 SZT2Q5T011 3432 aa0.68□□□□□ -2.3
DENND4A-203ENST00000561863 FLNCQ14315 2725 aa0.68□□□□□ -2.3
DENND4A-203ENST00000561863 GCN1Q92616 2671 aaKnown RBP0.67□□□□□ -2.3
DENND4A-203ENST00000561863 CD52P31358 61 aa0.67□□□□□ -2.3
DENND4A-203ENST00000561863 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
DENND4A-203ENST00000561863 TACC2O95359 2948 aa0.67□□□□□ -2.3
DENND4A-203ENST00000561863 DNAH6Q9C0G6 4158 aa0.67□□□□□ -2.3
DENND4A-203ENST00000561863 LRBAP50851 2863 aa0.67□□□□□ -2.3
DENND4A-203ENST00000561863 LRP1Q07954 4544 aaKnown RBP0.66□□□□□ -2.3
DENND4A-203ENST00000561863 SYNE1Q8NF91 8797 aaKnown RBP0.66□□□□□ -2.3
DENND4A-203ENST00000561863 CMYA5Q8N3K9 4069 aa0.66□□□□□ -2.3
DENND4A-203ENST00000561863 ZZEF1O43149 2961 aa0.66□□□□□ -2.3
DENND4A-203ENST00000561863 DEFB133Q30KQ1 61 aa0.66□□□□□ -2.3
DENND4A-203ENST00000561863 SONP18583 2426 aaKnown RBP0.66□□□□□ -2.3
DENND4A-203ENST00000561863 MAP1AP78559 2803 aaPredicted RBP0.65□□□□□ -2.3
DENND4A-203ENST00000561863 CFAP47Q6ZTR5 3102 aa0.65□□□□□ -2.3
DENND4A-203ENST00000561863 DNAH17Q9UFH2 4485 aa0.65□□□□□ -2.3
DENND4A-203ENST00000561863 NBEAL2Q6ZNJ1 2754 aa0.65□□□□□ -2.3
DENND4A-203ENST00000561863 SPENQ96T58 3664 aaKnown RBP0.65□□□□□ -2.31
DENND4A-203ENST00000561863 FAT1Q14517 4588 aa0.65□□□□□ -2.31
DENND4A-203ENST00000561863 CELSR3Q9NYQ7 3312 aa0.65□□□□□ -2.31
DENND4A-203ENST00000561863 SPTBN5Q9NRC6 3674 aaKnown RBP0.65□□□□□ -2.31
DENND4A-203ENST00000561863 UTP20O75691 2785 aaKnown RBP0.65□□□□□ -2.31
DENND4A-203ENST00000561863 DYNC1H1Q14204 4646 aaKnown RBP0.65□□□□□ -2.31
DENND4A-203ENST00000561863 ZANQ9Y493 2812 aa0.65□□□□□ -2.31
DENND4A-203ENST00000561863 SETXQ7Z333 2677 aaKnown RBP0.64□□□□□ -2.31
DENND4A-203ENST00000561863 WDFY4Q6ZS81 3184 aa0.64□□□□□ -2.31
DENND4A-203ENST00000561863 SPG11Q96JI7 2443 aa0.64□□□□□ -2.31
DENND4A-203ENST00000561863 CACNA1AO00555 2505 aa0.64□□□□□ -2.31
DENND4A-203ENST00000561863 MTORP42345 2549 aa0.64□□□□□ -2.31
DENND4A-203ENST00000561863 RPS29P62273 56 aaKnown RBP0.64□□□□□ -2.31
DENND4A-203ENST00000561863 NSD1Q96L73 2696 aaPredicted RBP0.64□□□□□ -2.31
DENND4A-203ENST00000561863 KALRNO60229 2985 aa0.64□□□□□ -2.31
DENND4A-203ENST00000561863 VPS13AQ96RL7 3174 aa0.64□□□□□ -2.31
DENND4A-203ENST00000561863 DMDP11532 3685 aa0.64□□□□□ -2.31
DENND4A-203ENST00000561863 NCOR2Q9Y618 2525 aa0.64□□□□□ -2.31
DENND4A-203ENST00000561863 ACANP16112 2415 aa0.64□□□□□ -2.31
DENND4A-203ENST00000561863 DCHS1Q96JQ0 3298 aa0.63□□□□□ -2.31
DENND4A-203ENST00000561863 NIPBLQ6KC79 2804 aaeCLIP0.63□□□□□ -2.31
DENND4A-203ENST00000561863 FREM2Q5SZK8 3169 aa0.63□□□□□ -2.31
DENND4A-203ENST00000561863 SMR3BP02814 79 aaPredicted RBP0.63□□□□□ -2.31
DENND4A-203ENST00000561863 CUBNO60494 3623 aa0.63□□□□□ -2.31
DENND4A-203ENST00000561863 LAMA5O15230 3695 aa0.62□□□□□ -2.31
DENND4A-203ENST00000561863 PKD1L1Q8TDX9 2849 aa0.62□□□□□ -2.31
DENND4A-203ENST00000561863 ANKHD1Q8IWZ3 2542 aaKnown RBP0.62□□□□□ -2.31
DENND4A-203ENST00000561863 SRCAPQ6ZRS2 3230 aa0.62□□□□□ -2.31
DENND4A-203ENST00000561863 HTN3P15516 51 aa0.62□□□□□ -2.31
DENND4A-203ENST00000561863 PKHD1P08F94 4074 aa0.62□□□□□ -2.31
DENND4A-203ENST00000561863 HIVEP1P15822 2718 aa0.62□□□□□ -2.31
DENND4A-203ENST00000561863 SMG1Q96Q15 3661 aaKnown RBP0.62□□□□□ -2.31
DENND4A-203ENST00000561863 CSMD1Q96PZ7 3565 aa0.62□□□□□ -2.31
DENND4A-203ENST00000561863 ACACBO00763 2458 aa0.61□□□□□ -2.31
DENND4A-203ENST00000561863 SPEGQ15772 3267 aa0.61□□□□□ -2.31
DENND4A-203ENST00000561863 CFAP46Q8IYW2 2715 aa0.6□□□□□ -2.31
DENND4A-203ENST00000561863 TGP01266 2768 aa0.6□□□□□ -2.31
DENND4A-203ENST00000561863 LPAP08519 4548 aa0.6□□□□□ -2.31
DENND4A-203ENST00000561863 KRTAP19-5Q3LI72 72 aa0.6□□□□□ -2.31
DENND4A-203ENST00000561863 HERC1Q15751 4861 aa0.6□□□□□ -2.31
DENND4A-203ENST00000561863 MUC17Q685J3 4493 aa0.6□□□□□ -2.31
DENND4A-203ENST00000561863 TEX15Q9BXT5 2789 aa0.6□□□□□ -2.31
DENND4A-203ENST00000561863 SVEP1Q4LDE5 3571 aa0.6□□□□□ -2.31
DENND4A-203ENST00000561863 TRRAPQ9Y4A5 3859 aa0.6□□□□□ -2.31
DENND4A-203ENST00000561863 GOLGB1Q14789 3259 aaKnown RBP0.59□□□□□ -2.31
DENND4A-203ENST00000561863 ZFYVE26Q68DK2 2539 aa0.59□□□□□ -2.31
DENND4A-203ENST00000561863 DEFB4AO15263 64 aa0.59□□□□□ -2.31
DENND4A-203ENST00000561863 ITPR2Q14571 2701 aa0.59□□□□□ -2.32
DENND4A-203ENST00000561863 MUC3AQ02505 3323 aa0.59□□□□□ -2.32
DENND4A-203ENST00000561863 ADGRG4Q8IZF6 3080 aa0.58□□□□□ -2.32
DENND4A-203ENST00000561863 UNC79Q9P2D8 2635 aa0.58□□□□□ -2.32
DENND4A-203ENST00000561863 MXRA5Q9NR99 2828 aa0.58□□□□□ -2.32
DENND4A-203ENST00000561863 LAMA1P25391 3075 aa0.58□□□□□ -2.32
DENND4A-203ENST00000561863 USP9XQ93008 2570 aaPredicted RBP0.58□□□□□ -2.32
DENND4A-203ENST00000561863 LAMA3Q16787 3333 aa0.58□□□□□ -2.32
DENND4A-203ENST00000561863 FLNAP21333 2647 aaKnown RBP0.57□□□□□ -2.32
DENND4A-203ENST00000561863 ANKRD11Q6UB99 2663 aaPredicted RBP0.57□□□□□ -2.32
DENND4A-203ENST00000561863 LRP1BQ9NZR2 4599 aa0.57□□□□□ -2.32
DENND4A-203ENST00000561863 SPRR2DP22532 72 aa0.57□□□□□ -2.32
DENND4A-203ENST00000561863 HRNRQ86YZ3 2850 aaPredicted RBP0.56□□□□□ -2.32
DENND4A-203ENST00000561863 DOPEY1Q5JWR5 2465 aa0.56□□□□□ -2.32
DENND4A-203ENST00000561863 TLN2Q9Y4G6 2542 aa0.56□□□□□ -2.32
DENND4A-203ENST00000561863 MT1AP04731 61 aa0.56□□□□□ -2.32
DENND4A-203ENST00000561863 TEP1Q99973 2627 aaKnown RBP0.56□□□□□ -2.32
DENND4A-203ENST00000561863 CSMD2Q7Z408 3487 aa0.55□□□□□ -2.32
DENND4A-203ENST00000561863 FLNBO75369 2602 aaKnown RBP0.55□□□□□ -2.32
DENND4A-203ENST00000561863 CENPEQ02224 2701 aa0.55□□□□□ -2.32
DENND4A-203ENST00000561863 KRTAP6-2Q3LI66 62 aa0.55□□□□□ -2.32
DENND4A-203ENST00000561863 MYO18BQ8IUG5 2567 aa0.55□□□□□ -2.32
DENND4A-203ENST00000561863 EP400Q96L91 3159 aa0.55□□□□□ -2.32
DENND4A-203ENST00000561863 LOC400499M0QZD8 3231 aa0.55□□□□□ -2.32
DENND4A-203ENST00000561863 FASNP49327 2511 aaKnown RBP0.55□□□□□ -2.32
DENND4A-203ENST00000561863 STAB2Q8WWQ8 2551 aa0.54□□□□□ -2.32
DENND4A-203ENST00000561863 UTRNP46939 3433 aa0.54□□□□□ -2.32
DENND4A-203ENST00000561863 XIRP2A4UGR9 3374 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms