RNA–Protein interactions for RNA: ENST00000561726.1

TNRC6A-208, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 4

Gene TNRC6A, Length 543 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-208ENST00000561726 TENM3Q9P273 2699 aa0.5□□□□□ -2.33
TNRC6A-208ENST00000561726 HIVEP1P15822 2718 aa0.5□□□□□ -2.33
TNRC6A-208ENST00000561726 HSPG2P98160 4391 aa0.49□□□□□ -2.33
TNRC6A-208ENST00000561726 SMR3BP02814 79 aaPredicted RBP0.49□□□□□ -2.33
TNRC6A-208ENST00000561726 PKHD1L1Q86WI1 4243 aa0.49□□□□□ -2.33
TNRC6A-208ENST00000561726 CUBNO60494 3623 aa0.49□□□□□ -2.33
TNRC6A-208ENST00000561726 ZANQ9Y493 2812 aa0.47□□□□□ -2.33
TNRC6A-208ENST00000561726 KRTAP19-5Q3LI72 72 aa0.47□□□□□ -2.33
TNRC6A-208ENST00000561726 MUC5ACP98088 5654 aa0.47□□□□□ -2.33
TNRC6A-208ENST00000561726 FRYQ5TBA9 3013 aa0.47□□□□□ -2.33
TNRC6A-208ENST00000561726 FLGP20930 4061 aaPredicted RBP0.46□□□□□ -2.34
TNRC6A-208ENST00000561726 MGAM2Q2M2H8 2515 aa0.45□□□□□ -2.34
TNRC6A-208ENST00000561726 CELSR3Q9NYQ7 3312 aa0.45□□□□□ -2.34
TNRC6A-208ENST00000561726 FLNAP21333 2647 aaKnown RBP0.45□□□□□ -2.34
TNRC6A-208ENST00000561726 LRP1BQ9NZR2 4599 aa0.45□□□□□ -2.34
TNRC6A-208ENST00000561726 DNAH8Q96JB1 4490 aa0.45□□□□□ -2.34
TNRC6A-208ENST00000561726 SPRR2EP22531 72 aa0.45□□□□□ -2.34
TNRC6A-208ENST00000561726 SPRR2FQ96RM1 72 aa0.45□□□□□ -2.34
TNRC6A-208ENST00000561726 APOBP04114 4563 aaKnown RBP0.45□□□□□ -2.34
TNRC6A-208ENST00000561726 TGP01266 2768 aa0.44□□□□□ -2.34
TNRC6A-208ENST00000561726 APELAP0DMC3 54 aa0.44□□□□□ -2.34
TNRC6A-208ENST00000561726 DEFB1P60022 68 aa0.43□□□□□ -2.34
TNRC6A-208ENST00000561726 DEFB136Q30KP8 78 aa0.43□□□□□ -2.34
TNRC6A-208ENST00000561726 RANBP2P49792 3224 aaKnown RBP0.43□□□□□ -2.34
TNRC6A-208ENST00000561726 HECTD4Q9Y4D8 3996 aa0.43□□□□□ -2.34
TNRC6A-208ENST00000561726 KALRNO60229 2985 aa0.42□□□□□ -2.34
TNRC6A-208ENST00000561726 DEFB124Q8NES8 71 aa0.42□□□□□ -2.34
TNRC6A-208ENST00000561726 PKHD1P08F94 4074 aa0.42□□□□□ -2.34
TNRC6A-208ENST00000561726 DNAH7Q8WXX0 4024 aa0.42□□□□□ -2.34
TNRC6A-208ENST00000561726 FAT4Q6V0I7 4981 aa0.42□□□□□ -2.34
TNRC6A-208ENST00000561726 MGAQ8IWI9 3026 aa0.41□□□□□ -2.34
TNRC6A-208ENST00000561726 HTN1P15515 57 aa0.41□□□□□ -2.34
TNRC6A-208ENST00000561726 DNAH6Q9C0G6 4158 aa0.41□□□□□ -2.34
TNRC6A-208ENST00000561726 FAT3Q8TDW7 4589 aa0.4□□□□□ -2.34
TNRC6A-208ENST00000561726 SPTAN1Q13813 2472 aaKnown RBP0.4□□□□□ -2.35
TNRC6A-208ENST00000561726 DOPEY1Q5JWR5 2465 aa0.4□□□□□ -2.35
TNRC6A-208ENST00000561726 MXRA5Q9NR99 2828 aa0.4□□□□□ -2.35
TNRC6A-208ENST00000561726 ZFHX4Q86UP3 3567 aa0.4□□□□□ -2.35
TNRC6A-208ENST00000561726 HMCN2Q8NDA2 5059 aa0.39□□□□□ -2.35
TNRC6A-208ENST00000561726 COL6A3P12111 3177 aa0.39□□□□□ -2.35
TNRC6A-208ENST00000561726 ITPR1Q14643 2758 aa0.39□□□□□ -2.35
TNRC6A-208ENST00000561726 LAMA1P25391 3075 aa0.39□□□□□ -2.35
TNRC6A-208ENST00000561726 SPENQ96T58 3664 aaKnown RBP0.39□□□□□ -2.35
TNRC6A-208ENST00000561726 SVEP1Q4LDE5 3571 aa0.38□□□□□ -2.35
TNRC6A-208ENST00000561726 DNAH10Q8IVF4 4471 aa0.37□□□□□ -2.35
TNRC6A-208ENST00000561726 WDR87Q6ZQQ6 2873 aa0.37□□□□□ -2.35
TNRC6A-208ENST00000561726 DNAH1Q9P2D7 4330 aa0.37□□□□□ -2.35
TNRC6A-208ENST00000561726 LAMA5O15230 3695 aa0.37□□□□□ -2.35
TNRC6A-208ENST00000561726 STAB2Q8WWQ8 2551 aa0.37□□□□□ -2.35
TNRC6A-208ENST00000561726 KMT2DO14686 5537 aa0.36□□□□□ -2.35
TNRC6A-208ENST00000561726 NBPF19A0A087WUL8 3843 aa0.36□□□□□ -2.35
TNRC6A-208ENST00000561726 DEFB133Q30KQ1 61 aa0.36□□□□□ -2.35
TNRC6A-208ENST00000561726 HERC1Q15751 4861 aa0.36□□□□□ -2.35
TNRC6A-208ENST00000561726 FAT1Q14517 4588 aa0.35□□□□□ -2.35
TNRC6A-208ENST00000561726 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
TNRC6A-208ENST00000561726 MDN1Q9NU22 5596 aa0.35□□□□□ -2.35
TNRC6A-208ENST00000561726 NBEAL1Q6ZS30 2694 aa0.35□□□□□ -2.35
TNRC6A-208ENST00000561726 TEX15Q9BXT5 2789 aa0.34□□□□□ -2.36
TNRC6A-208ENST00000561726 MAP1AP78559 2803 aaPredicted RBP0.34□□□□□ -2.36
TNRC6A-208ENST00000561726 AKAP9Q99996 3911 aa0.34□□□□□ -2.36
TNRC6A-208ENST00000561726 PLECQ15149 4684 aaKnown RBP0.34□□□□□ -2.36
TNRC6A-208ENST00000561726 ADGRG4Q8IZF6 3080 aa0.33□□□□□ -2.36
TNRC6A-208ENST00000561726 LRP2P98164 4655 aa0.33□□□□□ -2.36
TNRC6A-208ENST00000561726 TRIOO75962 3097 aa0.32□□□□□ -2.36
TNRC6A-208ENST00000561726 SPTBN5Q9NRC6 3674 aaKnown RBP0.32□□□□□ -2.36
TNRC6A-208ENST00000561726 DMXL2Q8TDJ6 3036 aa0.32□□□□□ -2.36
TNRC6A-208ENST00000561726 CFAP54Q96N23 3096 aa0.32□□□□□ -2.36
TNRC6A-208ENST00000561726 HTTP42858 3142 aa0.3□□□□□ -2.36
TNRC6A-208ENST00000561726 CSMD1Q96PZ7 3565 aa0.3□□□□□ -2.36
TNRC6A-208ENST00000561726 LAMA3Q16787 3333 aa0.3□□□□□ -2.36
TNRC6A-208ENST00000561726 GPR98Q8WXG9 6306 aa0.3□□□□□ -2.36
TNRC6A-208ENST00000561726 MT1HP80294 61 aa0.29□□□□□ -2.36
TNRC6A-208ENST00000561726 CFAP46Q8IYW2 2715 aa0.29□□□□□ -2.36
TNRC6A-208ENST00000561726 CMYA5Q8N3K9 4069 aa0.28□□□□□ -2.36
TNRC6A-208ENST00000561726 MT1EP04732 61 aa0.28□□□□□ -2.36
TNRC6A-208ENST00000561726 RPS29P62273 56 aaKnown RBP0.28□□□□□ -2.36
TNRC6A-208ENST00000561726 DNAH17Q9UFH2 4485 aa0.28□□□□□ -2.36
TNRC6A-208ENST00000561726 NIPBLQ6KC79 2804 aaeCLIP0.28□□□□□ -2.37
TNRC6A-208ENST00000561726 LRBAP50851 2863 aa0.27□□□□□ -2.37
TNRC6A-208ENST00000561726 ITPR2Q14571 2701 aa0.26□□□□□ -2.37
TNRC6A-208ENST00000561726 DYNC1H1Q14204 4646 aaKnown RBP0.26□□□□□ -2.37
TNRC6A-208ENST00000561726 ATMQ13315 3056 aa0.25□□□□□ -2.37
TNRC6A-208ENST00000561726 A0A096LPF7 62 aa0.25□□□□□ -2.37
TNRC6A-208ENST00000561726 PCLOQ9Y6V0 5065 aa0.25□□□□□ -2.37
TNRC6A-208ENST00000561726 C5orf42Q9H799 3197 aa0.24□□□□□ -2.37
TNRC6A-208ENST00000561726 TLN1Q9Y490 2541 aaKnown RBP0.24□□□□□ -2.37
TNRC6A-208ENST00000561726 CD52P31358 61 aa0.24□□□□□ -2.37
TNRC6A-208ENST00000561726 RELNP78509 3460 aa0.23□□□□□ -2.37
TNRC6A-208ENST00000561726 STATHP02808 62 aa0.23□□□□□ -2.37
TNRC6A-208ENST00000561726 MT1LQ93083 61 aa0.23□□□□□ -2.37
TNRC6A-208ENST00000561726 DEFB4AO15263 64 aa0.22□□□□□ -2.37
TNRC6A-208ENST00000561726 LINC01556Q5JQF7 62 aa0.22□□□□□ -2.37
TNRC6A-208ENST00000561726 MYO9AB2RTY4 2548 aa0.22□□□□□ -2.37
TNRC6A-208ENST00000561726 MUC17Q685J3 4493 aa0.22□□□□□ -2.37
TNRC6A-208ENST00000561726 DNAH12Q6ZR08 3092 aa0.22□□□□□ -2.37
TNRC6A-208ENST00000561726 CEP295Q9C0D2 2601 aa0.21□□□□□ -2.38
TNRC6A-208ENST00000561726 DNAH5Q8TE73 4624 aa0.21□□□□□ -2.38
TNRC6A-208ENST00000561726 DEFB108BQ8NET1 73 aa0.21□□□□□ -2.38
TNRC6A-208ENST00000561726 PRUNE2Q8WUY3 3088 aa0.2□□□□□ -2.38
TNRC6A-208ENST00000561726 FRYLO94915 3013 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms