RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 GPR98Q8WXG9 6306 aa1.81□□□□□ -2.12
SPG11-225ENST00000561391 KRTAP2-3P0C7H8 128 aa1.81□□□□□ -2.12
SPG11-225ENST00000561391 ATP5EP56381 51 aaPredicted RBP1.81□□□□□ -2.12
SPG11-225ENST00000561391 CD164Q04900 197 aa1.81□□□□□ -2.12
SPG11-225ENST00000561391 KLKP1Q107X0 134 aa1.81□□□□□ -2.12
SPG11-225ENST00000561391 SSBP3-AS1Q7Z2R9 100 aa1.81□□□□□ -2.12
SPG11-225ENST00000561391 KRTAP2-4Q9BYR9 128 aa1.81□□□□□ -2.12
SPG11-225ENST00000561391 MUC12Q9UKN1 5478 aa1.81□□□□□ -2.12
SPG11-225ENST00000561391 KMT2DO14686 5537 aa1.8□□□□□ -2.12
SPG11-225ENST00000561391 A0A087WSZ3 146 aa1.8□□□□□ -2.12
SPG11-225ENST00000561391 A8MWP4 228 aa1.8□□□□□ -2.12
SPG11-225ENST00000561391 HCG22E2RYF7 251 aa1.8□□□□□ -2.12
SPG11-225ENST00000561391 H3BPC8 53 aa1.8□□□□□ -2.12
SPG11-225ENST00000561391 IGLV7-43P04211 117 aa1.8□□□□□ -2.12
SPG11-225ENST00000561391 IGKV4-1P06312 121 aa1.8□□□□□ -2.12
SPG11-225ENST00000561391 MP68P56378 58 aa1.8□□□□□ -2.12
SPG11-225ENST00000561391 KRTAP19-2Q3LHN2 52 aa1.8□□□□□ -2.12
SPG11-225ENST00000561391 ASB16-AS1Q495Z4 193 aa1.8□□□□□ -2.12
SPG11-225ENST00000561391 FAM229BQ4G0N7 80 aa1.8□□□□□ -2.12
SPG11-225ENST00000561391 PRR15Q8IV56 129 aa1.8□□□□□ -2.12
SPG11-225ENST00000561391 C20orf197Q8N268 126 aa1.8□□□□□ -2.12
SPG11-225ENST00000561391 TP53AIP1Q9HCN2 124 aa1.8□□□□□ -2.12
SPG11-225ENST00000561391 TPRXLQ17RH7 258 aa1.79□□□□□ -2.12
SPG11-225ENST00000561391 TMEM254Q8TBM7 123 aa1.79□□□□□ -2.12
SPG11-225ENST00000561391 LINC00472Q9H8W2 130 aa1.79□□□□□ -2.12
SPG11-225ENST00000561391 MOBPQ13875 183 aa1.78□□□□□ -2.12
SPG11-225ENST00000561391 CASC2Q6XLA1 102 aa1.78□□□□□ -2.12
SPG11-225ENST00000561391 Q8N9L7 120 aa1.78□□□□□ -2.12
SPG11-225ENST00000561391 FAM236DA0A1B0GTK5 79 aa1.77□□□□□ -2.13
SPG11-225ENST00000561391 hDV103S1A0JD37 113 aa1.77□□□□□ -2.13
SPG11-225ENST00000561391 H7BZZ5 65 aa1.77□□□□□ -2.13
SPG11-225ENST00000561391 K7EQZ3 153 aa1.77□□□□□ -2.13
SPG11-225ENST00000561391 FAM236CP0DP71 79 aa1.77□□□□□ -2.13
SPG11-225ENST00000561391 Q5XG85 94 aa1.77□□□□□ -2.13
SPG11-225ENST00000561391 SERP1Q9Y6X1 66 aa1.77□□□□□ -2.13
SPG11-225ENST00000561391 C8orf87E5RJ46 101 aa1.76□□□□□ -2.13
SPG11-225ENST00000561391 SPAG11AQ6PDA7 123 aa1.76□□□□□ -2.13
SPG11-225ENST00000561391 LIMD2Q9BT23 127 aa1.76□□□□□ -2.13
SPG11-225ENST00000561391 SMIM26A0A096LP01 95 aa1.75□□□□□ -2.13
SPG11-225ENST00000561391 A0A1B0GVX0 72 aa1.75□□□□□ -2.13
SPG11-225ENST00000561391 SPINK1P00995 79 aa1.75□□□□□ -2.13
SPG11-225ENST00000561391 RPS29P62273 56 aaKnown RBP1.75□□□□□ -2.13
SPG11-225ENST00000561391 DEFB116Q30KQ4 102 aa1.75□□□□□ -2.13
SPG11-225ENST00000561391 SPANXA2-OT1Q8N9U9 137 aa1.75□□□□□ -2.13
SPG11-225ENST00000561391 SNURFQ9Y675 71 aa1.75□□□□□ -2.13
SPG11-225ENST00000561391 TRAV22A0A0B4J277 110 aa1.74□□□□□ -2.13
SPG11-225ENST00000561391 A0A0G2JQZ4 141 aa1.74□□□□□ -2.13
SPG11-225ENST00000561391 WFDC13Q8IUB5 93 aa1.74□□□□□ -2.13
SPG11-225ENST00000561391 C1orf64Q8NEQ6 169 aa1.74□□□□□ -2.13
SPG11-225ENST00000561391 ZCCHC13Q8WW36 166 aaKnown RBP1.74□□□□□ -2.13
SPG11-225ENST00000561391 MRPL34Q9BQ48 92 aaKnown RBP1.74□□□□□ -2.13
SPG11-225ENST00000561391 C8orf17Q9NRJ1 99 aa1.74□□□□□ -2.13
SPG11-225ENST00000561391 IGHV6-1A0A0B4J1U7 121 aa1.73□□□□□ -2.13
SPG11-225ENST00000561391 MMP24-AS1A0A0U1RRL7 71 aa1.73□□□□□ -2.13
SPG11-225ENST00000561391 H0Y9P7 68 aa1.73□□□□□ -2.13
SPG11-225ENST00000561391 KRTAP19-6Q3LI70 58 aa1.73□□□□□ -2.13
SPG11-225ENST00000561391 HRCT1Q6UXD1 115 aa1.73□□□□□ -2.13
SPG11-225ENST00000561391 COX6B2Q6YFQ2 88 aa1.73□□□□□ -2.13
SPG11-225ENST00000561391 LINC00208Q96KT6 92 aa1.73□□□□□ -2.13
SPG11-225ENST00000561391 Q96NJ1 140 aa1.73□□□□□ -2.13
SPG11-225ENST00000561391 KRTAP2-1Q9BYU5 128 aa1.73□□□□□ -2.13
SPG11-225ENST00000561391 V9GYY9 64 aa1.73□□□□□ -2.13
SPG11-225ENST00000561391 LOC101927531A0A1B0GV80 90 aa1.72□□□□□ -2.13
SPG11-225ENST00000561391 NDUFS5O43920 106 aa1.72□□□□□ -2.13
SPG11-225ENST00000561391 LINC00313P59037 77 aa1.72□□□□□ -2.13
SPG11-225ENST00000561391 C1orf195Q5TG92 126 aa1.72□□□□□ -2.13
SPG11-225ENST00000561391 CYP4F30PQ9H0H9 118 aa1.72□□□□□ -2.13
SPG11-225ENST00000561391 CYSTM1Q9H1C7 97 aa1.72□□□□□ -2.13
SPG11-225ENST00000561391 SEC61GP60059 68 aa1.71□□□□□ -2.14
SPG11-225ENST00000561391 KRTAP13-2Q52LG2 175 aa1.7□□□□□ -2.14
SPG11-225ENST00000561391 CAMK2N1Q7Z7J9 78 aa1.7□□□□□ -2.14
SPG11-225ENST00000561391 LINC00304Q8N9R0 145 aa1.7□□□□□ -2.14
SPG11-225ENST00000561391 FLGP20930 4061 aaPredicted RBP1.7□□□□□ -2.14
SPG11-225ENST00000561391 PCOTHQ58A44 107 aa1.69□□□□□ -2.14
SPG11-225ENST00000561391 ACYP2P14621 99 aa1.68□□□□□ -2.14
SPG11-225ENST00000561391 Q1T7F1 81 aa1.68□□□□□ -2.14
SPG11-225ENST00000561391 MDN1Q9NU22 5596 aa1.68□□□□□ -2.14
SPG11-225ENST00000561391 A8MUN3 132 aa1.66□□□□□ -2.14
SPG11-225ENST00000561391 C4orf26Q17RF5 130 aa1.66□□□□□ -2.14
SPG11-225ENST00000561391 FP248Q71RG6 208 aaPredicted RBP1.66□□□□□ -2.14
SPG11-225ENST00000561391 CHKB-CPT1BH3BT56 60 aa1.65□□□□□ -2.15
SPG11-225ENST00000561391 MT2AP02795 61 aa1.65□□□□□ -2.15
SPG11-225ENST00000561391 KRTAP10-10P60014 251 aa1.65□□□□□ -2.15
SPG11-225ENST00000561391 Q5W150 140 aa1.65□□□□□ -2.15
SPG11-225ENST00000561391 COA5Q86WW8 74 aa1.65□□□□□ -2.15
SPG11-225ENST00000561391 SPTSSBQ8NFR3 76 aa1.65□□□□□ -2.15
SPG11-225ENST00000561391 PRO0628Q9UI54 55 aa1.65□□□□□ -2.15
SPG11-225ENST00000561391 MUC19Q7Z5P9 8384 aa1.64□□□□□ -2.15
SPG11-225ENST00000561391 A8MUU9 505 aa1.64□□□□□ -2.15
SPG11-225ENST00000561391 MT1FP04733 61 aa1.64□□□□□ -2.15
SPG11-225ENST00000561391 C7orf65Q6ZTY9 151 aa1.64□□□□□ -2.15
SPG11-225ENST00000561391 DMAC1Q96GE9 116 aa1.64□□□□□ -2.15
SPG11-225ENST00000561391 C20orf166-AS1Q96NR2 134 aa1.64□□□□□ -2.15
SPG11-225ENST00000561391 PRR15LQ9BU68 103 aa1.64□□□□□ -2.15
SPG11-225ENST00000561391 HRES1P13985 223 aa1.63□□□□□ -2.15
SPG11-225ENST00000561391 ATP11AUNQ6ZP68 121 aa1.62□□□□□ -2.15
SPG11-225ENST00000561391 LINC01558Q9Y6Z2 57 aa1.62□□□□□ -2.15
SPG11-225ENST00000561391 SPRR2EP22531 72 aa1.61□□□□□ -2.15
SPG11-225ENST00000561391 SPRR2BP35325 72 aa1.61□□□□□ -2.15
SPG11-225ENST00000561391 SPRR2AP35326 72 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms