RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 MRPL34Q9BQ48 92 aaKnown RBP1.2□□□□□ -2.22
HERC1-211ENST00000560983 TRACP01848 142 aa1.19□□□□□ -2.22
HERC1-211ENST00000560983 FABP2P12104 132 aa1.19□□□□□ -2.22
HERC1-211ENST00000560983 S100PP25815 95 aa1.19□□□□□ -2.22
HERC1-211ENST00000560983 TMEM254Q8TBM7 123 aa1.19□□□□□ -2.22
HERC1-211ENST00000560983 MMP24-AS1A0A0U1RRL7 71 aa1.18□□□□□ -2.22
HERC1-211ENST00000560983 A0A1B0GV72 72 aa1.18□□□□□ -2.22
HERC1-211ENST00000560983 HSBP1O75506 76 aa1.18□□□□□ -2.22
HERC1-211ENST00000560983 BVES-AS1Q5T3Y7 98 aa1.18□□□□□ -2.22
HERC1-211ENST00000560983 R4GN34 69 aa1.18□□□□□ -2.22
HERC1-211ENST00000560983 NDUFS5O43920 106 aa1.17□□□□□ -2.22
HERC1-211ENST00000560983 FABP4P15090 132 aa1.17□□□□□ -2.22
HERC1-211ENST00000560983 LINC01554Q52M75 96 aa1.17□□□□□ -2.22
HERC1-211ENST00000560983 SCGB1D4Q6XE38 83 aa1.17□□□□□ -2.22
HERC1-211ENST00000560983 hDV103S1A0JD37 113 aa1.16□□□□□ -2.22
HERC1-211ENST00000560983 M0QZ58 72 aa1.16□□□□□ -2.22
HERC1-211ENST00000560983 P0C880 135 aa1.16□□□□□ -2.22
HERC1-211ENST00000560983 Q6ZQT0 140 aa1.16□□□□□ -2.22
HERC1-211ENST00000560983 UQCC3Q6UW78 93 aa1.15□□□□□ -2.23
HERC1-211ENST00000560983 H0YGX0 51 aa1.14□□□□□ -2.23
HERC1-211ENST00000560983 HCG22E2RYF7 251 aa1.13□□□□□ -2.23
HERC1-211ENST00000560983 SYS1-DBNDD2H3BUS1 97 aa1.13□□□□□ -2.23
HERC1-211ENST00000560983 NDUFC1O43677 76 aa1.13□□□□□ -2.23
HERC1-211ENST00000560983 SNCGO76070 127 aa1.13□□□□□ -2.23
HERC1-211ENST00000560983 LINC01545Q5VT33 79 aa1.13□□□□□ -2.23
HERC1-211ENST00000560983 VPS25Q9BRG1 176 aa1.13□□□□□ -2.23
HERC1-211ENST00000560983 A0A1B0GX51 115 aa1.12□□□□□ -2.23
HERC1-211ENST00000560983 TMEM218A2RU14 115 aa1.12□□□□□ -2.23
HERC1-211ENST00000560983 A0A0D9SG42 100 aa1.11□□□□□ -2.23
HERC1-211ENST00000560983 TMEM256-PLSCR3K7ERE1 68 aa1.1□□□□□ -2.23
HERC1-211ENST00000560983 KRTAP6-2Q3LI66 62 aa1.1□□□□□ -2.23
HERC1-211ENST00000560983 COA6Q5JTJ3 125 aaKnown RBP1.1□□□□□ -2.23
HERC1-211ENST00000560983 YPEL4Q96NS1 127 aa1.1□□□□□ -2.23
HERC1-211ENST00000560983 ORMDL1Q9P0S3 153 aa1.09□□□□□ -2.23
HERC1-211ENST00000560983 A0A1W2PPM0 123 aa1.08□□□□□ -2.24
HERC1-211ENST00000560983 H3BQ85 93 aa1.08□□□□□ -2.24
HERC1-211ENST00000560983 KRTAP6-1Q3LI64 71 aa1.08□□□□□ -2.24
HERC1-211ENST00000560983 HIST1H4GQ99525 98 aa1.08□□□□□ -2.24
HERC1-211ENST00000560983 C9JAW5 83 aa1.06□□□□□ -2.24
HERC1-211ENST00000560983 SNAPINO95295 136 aa1.06□□□□□ -2.24
HERC1-211ENST00000560983 BATFQ16520 125 aa1.06□□□□□ -2.24
HERC1-211ENST00000560983 C20orf197Q8N268 126 aa1.06□□□□□ -2.24
HERC1-211ENST00000560983 A0A1B0GW54 56 aa1.05□□□□□ -2.24
HERC1-211ENST00000560983 CASC2Q6XLA1 102 aa1.05□□□□□ -2.24
HERC1-211ENST00000560983 ATOH7Q8N100 152 aa1.05□□□□□ -2.24
HERC1-211ENST00000560983 CYP4F30PQ9H0H9 118 aa1.05□□□□□ -2.24
HERC1-211ENST00000560983 C10orf95Q9H7T3 257 aa1.05□□□□□ -2.24
HERC1-211ENST00000560983 K7EP34 96 aa1.04□□□□□ -2.24
HERC1-211ENST00000560983 MT1AP04731 61 aa1.04□□□□□ -2.24
HERC1-211ENST00000560983 NREPQ16612 68 aa1.04□□□□□ -2.24
HERC1-211ENST00000560983 A0A0B4J2C4 111 aa1.03□□□□□ -2.24
HERC1-211ENST00000560983 DNAL4O96015 105 aa1.03□□□□□ -2.24
HERC1-211ENST00000560983 MT-ATP8P03928 68 aa1.03□□□□□ -2.24
HERC1-211ENST00000560983 CLLU1Q5K131 121 aa1.03□□□□□ -2.24
HERC1-211ENST00000560983 CAMK2N1Q7Z7J9 78 aa1.02□□□□□ -2.25
HERC1-211ENST00000560983 LOC110117498A0A087WWA1 95 aa1.01□□□□□ -2.25
HERC1-211ENST00000560983 PHGR1C9JFL3 82 aa1.01□□□□□ -2.25
HERC1-211ENST00000560983 KRTDAPP60985 99 aa1.01□□□□□ -2.25
HERC1-211ENST00000560983 NAA38Q9BRA0 125 aaKnown RBP1.01□□□□□ -2.25
HERC1-211ENST00000560983 PRO1854Q9UHT4 67 aa1□□□□□ -2.25
HERC1-211ENST00000560983 ACYP1P07311 99 aa0.99□□□□□ -2.25
HERC1-211ENST00000560983 BAALC-AS2P0C853 105 aa0.99□□□□□ -2.25
HERC1-211ENST00000560983 BPY2O14599 106 aa0.98□□□□□ -2.25
HERC1-211ENST00000560983 APOC3P02656 99 aa0.98□□□□□ -2.25
HERC1-211ENST00000560983 HIST3H2BBQ8N257 126 aa0.97□□□□□ -2.25
HERC1-211ENST00000560983 JMJD7-PLA2G4BH0Y9G9 81 aa0.96□□□□□ -2.26
HERC1-211ENST00000560983 HIST1H2BKO60814 126 aa0.96□□□□□ -2.26
HERC1-211ENST00000560983 HIST1H2BJP06899 126 aa0.96□□□□□ -2.26
HERC1-211ENST00000560983 HIST1H2BOP23527 126 aa0.96□□□□□ -2.26
HERC1-211ENST00000560983 HIST1H2BBP33778 126 aa0.96□□□□□ -2.26
HERC1-211ENST00000560983 HIST1H2BDP58876 126 aa0.96□□□□□ -2.26
HERC1-211ENST00000560983 HIST1H2BCP62807 126 aa0.96□□□□□ -2.26
HERC1-211ENST00000560983 HIST2H2BEQ16778 126 aa0.96□□□□□ -2.26
HERC1-211ENST00000560983 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.96□□□□□ -2.26
HERC1-211ENST00000560983 SVBPQ8N300 66 aa0.96□□□□□ -2.26
HERC1-211ENST00000560983 HIST1H2BHQ93079 126 aa0.96□□□□□ -2.26
HERC1-211ENST00000560983 HIST1H2BNQ99877 126 aa0.96□□□□□ -2.26
HERC1-211ENST00000560983 HIST1H2BMQ99879 126 aa0.96□□□□□ -2.26
HERC1-211ENST00000560983 TP53AIP1Q9HCN2 124 aa0.96□□□□□ -2.26
HERC1-211ENST00000560983 HIGD1BQ9P298 99 aa0.96□□□□□ -2.26
HERC1-211ENST00000560983 TRAV22A0A0B4J277 110 aa0.95□□□□□ -2.26
HERC1-211ENST00000560983 KRTAP13-4Q3LI77 160 aa0.95□□□□□ -2.26
HERC1-211ENST00000560983 HIST1H2BLQ99880 126 aa0.95□□□□□ -2.26
HERC1-211ENST00000560983 C14orf132Q9NPU4 83 aa0.95□□□□□ -2.26
HERC1-211ENST00000560983 COX6CP09669 75 aa0.94□□□□□ -2.26
HERC1-211ENST00000560983 PSMB2P49721 201 aa0.94□□□□□ -2.26
HERC1-211ENST00000560983 LOC101927531A0A1B0GV80 90 aa0.93□□□□□ -2.26
HERC1-211ENST00000560983 DLEU1O43261 78 aa0.93□□□□□ -2.26
HERC1-211ENST00000560983 COX8AP10176 69 aa0.93□□□□□ -2.26
HERC1-211ENST00000560983 FXYD2P54710 66 aa0.93□□□□□ -2.26
HERC1-211ENST00000560983 K7ERJ3 54 aa0.92□□□□□ -2.26
HERC1-211ENST00000560983 HSBP1L1C9JCN9 74 aa0.91□□□□□ -2.26
HERC1-211ENST00000560983 NDUFA5Q16718 116 aa0.9□□□□□ -2.27
HERC1-211ENST00000560983 C14orf144Q96I85 54 aa0.9□□□□□ -2.27
HERC1-211ENST00000560983 SCGB1C2P0DMR2 95 aa0.89□□□□□ -2.27
HERC1-211ENST00000560983 TNP1P09430 55 aa0.86□□□□□ -2.27
HERC1-211ENST00000560983 ATXN8Q156A1 80 aa0.86□□□□□ -2.27
HERC1-211ENST00000560983 SPCS1Q9Y6A9 102 aa0.84□□□□□ -2.27
HERC1-211ENST00000560983 H0Y9P7 68 aa0.83□□□□□ -2.28
HERC1-211ENST00000560983 KRTAP12-1P59990 96 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 181.6 ms