RNA–Protein interactions for RNA: ENST00000559601.2

AP3S2-210, Transcript of adaptor related protein complex 3 subunit sigma 2, humanhuman

TSL 4

Gene AP3S2, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2-210ENST00000559601 CUBNO60494 3623 aa1.94□□□□□ -2.1
AP3S2-210ENST00000559601 A0A087WTM6 91 aa1.94□□□□□ -2.1
AP3S2-210ENST00000559601 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
AP3S2-210ENST00000559601 C20orf166-AS1Q96NR2 134 aa1.94□□□□□ -2.1
AP3S2-210ENST00000559601 TENM3Q9P273 2699 aa1.94□□□□□ -2.1
AP3S2-210ENST00000559601 DYNC2H1Q8NCM8 4307 aaKnown RBP1.94□□□□□ -2.1
AP3S2-210ENST00000559601 ATRQ13535 2644 aa1.94□□□□□ -2.1
AP3S2-210ENST00000559601 FLG2Q5D862 2391 aaPredicted RBP1.94□□□□□ -2.1
AP3S2-210ENST00000559601 ANK2Q01484 3957 aa1.93□□□□□ -2.1
AP3S2-210ENST00000559601 RPS29P62273 56 aaKnown RBP1.93□□□□□ -2.1
AP3S2-210ENST00000559601 SPINK6Q6UWN8 80 aa1.93□□□□□ -2.1
AP3S2-210ENST00000559601 APLNQ9ULZ1 77 aa1.93□□□□□ -2.1
AP3S2-210ENST00000559601 VPS13DQ5THJ4 4388 aa1.93□□□□□ -2.1
AP3S2-210ENST00000559601 BAHCC1Q9P281 2608 aa1.92□□□□□ -2.1
AP3S2-210ENST00000559601 DNAH8Q96JB1 4490 aa1.92□□□□□ -2.1
AP3S2-210ENST00000559601 NBDYA0A0U1RRE5 68 aa1.92□□□□□ -2.1
AP3S2-210ENST00000559601 HUWE1Q7Z6Z7 4374 aaKnown RBP1.91□□□□□ -2.1
AP3S2-210ENST00000559601 RPL37P61927 97 aaKnown RBP1.91□□□□□ -2.1
AP3S2-210ENST00000559601 PDZD2O15018 2839 aa1.9□□□□□ -2.1
AP3S2-210ENST00000559601 FRAS1Q86XX4 4008 aa1.9□□□□□ -2.1
AP3S2-210ENST00000559601 CMYA5Q8N3K9 4069 aa1.9□□□□□ -2.1
AP3S2-210ENST00000559601 TENM4Q6N022 2769 aa1.9□□□□□ -2.1
AP3S2-210ENST00000559601 NSD1Q96L73 2696 aaPredicted RBP1.9□□□□□ -2.1
AP3S2-210ENST00000559601 DNAH10Q8IVF4 4471 aa1.9□□□□□ -2.11
AP3S2-210ENST00000559601 DNAH17Q9UFH2 4485 aa1.9□□□□□ -2.11
AP3S2-210ENST00000559601 SPINK1P00995 79 aa1.89□□□□□ -2.11
AP3S2-210ENST00000559601 SPINT4Q6UDR6 99 aa1.89□□□□□ -2.11
AP3S2-210ENST00000559601 UBE2DNLQ8IWF7 75 aa1.89□□□□□ -2.11
AP3S2-210ENST00000559601 HECTD1Q9ULT8 2610 aa1.89□□□□□ -2.11
AP3S2-210ENST00000559601 ITPR2Q14571 2701 aa1.89□□□□□ -2.11
AP3S2-210ENST00000559601 FLNBO75369 2602 aaKnown RBP1.88□□□□□ -2.11
AP3S2-210ENST00000559601 TPRXLQ17RH7 258 aa1.88□□□□□ -2.11
AP3S2-210ENST00000559601 LYSTQ99698 3801 aa1.88□□□□□ -2.11
AP3S2-210ENST00000559601 HECTD4Q9Y4D8 3996 aa1.88□□□□□ -2.11
AP3S2-210ENST00000559601 PRKDCP78527 4128 aaKnown RBP1.87□□□□□ -2.11
AP3S2-210ENST00000559601 DNAH7Q8WXX0 4024 aa1.87□□□□□ -2.11
AP3S2-210ENST00000559601 DNAH6Q9C0G6 4158 aa1.87□□□□□ -2.11
AP3S2-210ENST00000559601 NOTCH1P46531 2555 aa1.87□□□□□ -2.11
AP3S2-210ENST00000559601 MAST4O15021 2626 aa1.87□□□□□ -2.11
AP3S2-210ENST00000559601 KRTAP13-2Q52LG2 175 aa1.87□□□□□ -2.11
AP3S2-210ENST00000559601 SMR3AQ99954 134 aa1.87□□□□□ -2.11
AP3S2-210ENST00000559601 CRIPTQ9P021 101 aa1.87□□□□□ -2.11
AP3S2-210ENST00000559601 USP24Q9UPU5 2620 aa1.87□□□□□ -2.11
AP3S2-210ENST00000559601 DNAH9Q9NYC9 4486 aa1.87□□□□□ -2.11
AP3S2-210ENST00000559601 TENM1Q9UKZ4 2725 aa1.87□□□□□ -2.11
AP3S2-210ENST00000559601 MEGF8Q7Z7M0 2845 aa1.85□□□□□ -2.11
AP3S2-210ENST00000559601 STAB2Q8WWQ8 2551 aa1.85□□□□□ -2.11
AP3S2-210ENST00000559601 COL6A5A8TX70 2615 aa1.85□□□□□ -2.11
AP3S2-210ENST00000559601 SPRR5A0A1B0GTR4 108 aa1.85□□□□□ -2.11
AP3S2-210ENST00000559601 TGP01266 2768 aa1.85□□□□□ -2.11
AP3S2-210ENST00000559601 DNAH2Q9P225 4427 aa1.85□□□□□ -2.11
AP3S2-210ENST00000559601 DNAH11Q96DT5 4516 aa1.85□□□□□ -2.11
AP3S2-210ENST00000559601 COL7A1Q02388 2944 aa1.84□□□□□ -2.11
AP3S2-210ENST00000559601 NBEAL1Q6ZS30 2694 aa1.84□□□□□ -2.11
AP3S2-210ENST00000559601 J3QKU1 62 aa1.83□□□□□ -2.12
AP3S2-210ENST00000559601 FBN1P35555 2871 aaKnown RBP1.83□□□□□ -2.12
AP3S2-210ENST00000559601 STAB1Q9NY15 2570 aa1.83□□□□□ -2.12
AP3S2-210ENST00000559601 SACSQ9NZJ4 4579 aa1.83□□□□□ -2.12
AP3S2-210ENST00000559601 MGAM2Q2M2H8 2515 aa1.82□□□□□ -2.12
AP3S2-210ENST00000559601 PLECQ15149 4684 aaKnown RBP1.82□□□□□ -2.12
AP3S2-210ENST00000559601 S4R3F8 94 aa1.81□□□□□ -2.12
AP3S2-210ENST00000559601 DMBT1Q9UGM3 2413 aaPredicted RBP1.81□□□□□ -2.12
AP3S2-210ENST00000559601 M0QZ58 72 aa1.79□□□□□ -2.12
AP3S2-210ENST00000559601 KRTAP13-4Q3LI77 160 aa1.79□□□□□ -2.12
AP3S2-210ENST00000559601 PKHD1L1Q86WI1 4243 aa1.79□□□□□ -2.12
AP3S2-210ENST00000559601 KRTAP12-1P59990 96 aa1.78□□□□□ -2.12
AP3S2-210ENST00000559601 VPS13BQ7Z7G8 4022 aa1.78□□□□□ -2.12
AP3S2-210ENST00000559601 CSMD3Q7Z407 3707 aa1.78□□□□□ -2.13
AP3S2-210ENST00000559601 C10orf95Q9H7T3 257 aa1.77□□□□□ -2.13
AP3S2-210ENST00000559601 DNAH5Q8TE73 4624 aa1.76□□□□□ -2.13
AP3S2-210ENST00000559601 PLAC4Q8WY50 150 aa1.76□□□□□ -2.13
AP3S2-210ENST00000559601 FBN3Q75N90 2809 aa1.76□□□□□ -2.13
AP3S2-210ENST00000559601 LRP1BQ9NZR2 4599 aa1.74□□□□□ -2.13
AP3S2-210ENST00000559601 KMT2AQ03164 3969 aa1.74□□□□□ -2.13
AP3S2-210ENST00000559601 A0A0D9SG42 100 aa1.74□□□□□ -2.13
AP3S2-210ENST00000559601 R4GN34 69 aa1.73□□□□□ -2.13
AP3S2-210ENST00000559601 STARD9Q9P2P6 4700 aa1.72□□□□□ -2.13
AP3S2-210ENST00000559601 PKHD1P08F94 4074 aa1.71□□□□□ -2.14
AP3S2-210ENST00000559601 TNXBP22105 4242 aa1.7□□□□□ -2.14
AP3S2-210ENST00000559601 C9orf92A6NGG3 77 aa1.69□□□□□ -2.14
AP3S2-210ENST00000559601 LRP1Q07954 4544 aaKnown RBP1.68□□□□□ -2.14
AP3S2-210ENST00000559601 FAT2Q9NYQ8 4349 aa1.68□□□□□ -2.14
AP3S2-210ENST00000559601 DYNC1H1Q14204 4646 aaKnown RBP1.67□□□□□ -2.14
AP3S2-210ENST00000559601 PRO2289Q9P1D8 64 aa1.67□□□□□ -2.14
AP3S2-210ENST00000559601 APOBP04114 4563 aaKnown RBP1.67□□□□□ -2.14
AP3S2-210ENST00000559601 PKD1P98161 4303 aa1.66□□□□□ -2.14
AP3S2-210ENST00000559601 KRTAP10-4P60372 401 aaPredicted RBP1.66□□□□□ -2.14
AP3S2-210ENST00000559601 CRCT1Q9UGL9 99 aa1.66□□□□□ -2.14
AP3S2-210ENST00000559601 INE1O15225 51 aa1.65□□□□□ -2.15
AP3S2-210ENST00000559601 HSPG2P98160 4391 aa1.64□□□□□ -2.15
AP3S2-210ENST00000559601 KRTAP4-1Q9BYQ7 146 aa1.64□□□□□ -2.15
AP3S2-210ENST00000559601 FAT1Q14517 4588 aa1.62□□□□□ -2.15
AP3S2-210ENST00000559601 FAT3Q8TDW7 4589 aa1.62□□□□□ -2.15
AP3S2-210ENST00000559601 MYCBP2O75592 4640 aa1.6□□□□□ -2.15
AP3S2-210ENST00000559601 Q5VSD8 79 aa1.6□□□□□ -2.15
AP3S2-210ENST00000559601 TNP1P09430 55 aa1.57□□□□□ -2.16
AP3S2-210ENST00000559601 DNHD1Q96M86 4753 aa1.56□□□□□ -2.16
AP3S2-210ENST00000559601 KRTAP12-4P60329 112 aa1.55□□□□□ -2.16
AP3S2-210ENST00000559601 KRTAP6-3Q3LI67 103 aa1.55□□□□□ -2.16
AP3S2-210ENST00000559601 HYDINQ4G0P3 5121 aa1.53□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms