RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 PRUNE2Q8WUY3 3088 aa-1.12□□□□□ -2.59
CASC4-206ENST00000558847 A8MTW9 85 aa-1.12□□□□□ -2.59
CASC4-206ENST00000558847 M0QY20 66 aa-1.12□□□□□ -2.59
CASC4-206ENST00000558847 DEFB136Q30KP8 78 aa-1.12□□□□□ -2.59
CASC4-206ENST00000558847 ZC3H13Q5T200 1668 aaKnown RBP-1.13□□□□□ -2.59
CASC4-206ENST00000558847 ZFHX4Q86UP3 3567 aa-1.14□□□□□ -2.59
CASC4-206ENST00000558847 RRBP1Q9P2E9 1410 aaKnown RBP-1.15□□□□□ -2.59
CASC4-206ENST00000558847 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.15□□□□□ -2.59
CASC4-206ENST00000558847 RPS27P42677 84 aaKnown RBP-1.15□□□□□ -2.59
CASC4-206ENST00000558847 MINOS1Q5TGZ0 78 aa-1.15□□□□□ -2.59
CASC4-206ENST00000558847 RPS27LQ71UM5 84 aaKnown RBP-1.15□□□□□ -2.59
CASC4-206ENST00000558847 RNF17Q9BXT8 1623 aaKnown RBP-1.15□□□□□ -2.59
CASC4-206ENST00000558847 LMTK2Q8IWU2 1503 aa-1.15□□□□□ -2.59
CASC4-206ENST00000558847 KIF1AQ12756 1690 aa-1.16□□□□□ -2.59
CASC4-206ENST00000558847 CRIP1P50238 77 aa-1.16□□□□□ -2.6
CASC4-206ENST00000558847 ENHOQ6UWT2 76 aa-1.16□□□□□ -2.6
CASC4-206ENST00000558847 ITSN2Q9NZM3 1697 aa-1.16□□□□□ -2.6
CASC4-206ENST00000558847 TJP1Q07157 1748 aa-1.17□□□□□ -2.6
CASC4-206ENST00000558847 LEAP2Q969E1 77 aa-1.17□□□□□ -2.6
CASC4-206ENST00000558847 A0A1B0GUL6 1792 aa-1.17□□□□□ -2.6
CASC4-206ENST00000558847 INO80Q9ULG1 1556 aaPredicted RBP-1.17□□□□□ -2.6
CASC4-206ENST00000558847 CFAP54Q96N23 3096 aa-1.18□□□□□ -2.6
CASC4-206ENST00000558847 ETDCA0A1B0GVM5 59 aa-1.18□□□□□ -2.6
CASC4-206ENST00000558847 H3BVH4 76 aa-1.18□□□□□ -2.6
CASC4-206ENST00000558847 FCER1GP30273 86 aa-1.18□□□□□ -2.6
CASC4-206ENST00000558847 C6orf48Q9UBA6 75 aa-1.18□□□□□ -2.6
CASC4-206ENST00000558847 DNMBPQ6XZF7 1577 aa-1.18□□□□□ -2.6
CASC4-206ENST00000558847 LRRIQ1Q96JM4 1722 aa-1.19□□□□□ -2.6
CASC4-206ENST00000558847 CRYBG3Q68DQ2 2970 aa-1.19□□□□□ -2.6
CASC4-206ENST00000558847 SFTA3P0C7M3 94 aa-1.2□□□□□ -2.6
CASC4-206ENST00000558847 MYO15AQ9UKN7 3530 aa-1.2□□□□□ -2.6
CASC4-206ENST00000558847 ABRACLQ9P1F3 81 aa-1.22□□□□□ -2.6
CASC4-206ENST00000558847 SPEGQ15772 3267 aa-1.22□□□□□ -2.61
CASC4-206ENST00000558847 NRAPQ86VF7 1730 aa-1.23□□□□□ -2.61
CASC4-206ENST00000558847 NCBP2-AS2Q69YL0 99 aa-1.23□□□□□ -2.61
CASC4-206ENST00000558847 ABCA8O94911 1581 aa-1.23□□□□□ -2.61
CASC4-206ENST00000558847 CENPEQ02224 2701 aa-1.23□□□□□ -2.61
CASC4-206ENST00000558847 CEP350Q5VT06 3117 aa-1.24□□□□□ -2.61
CASC4-206ENST00000558847 DEFB114Q30KQ6 69 aa-1.24□□□□□ -2.61
CASC4-206ENST00000558847 PREX2Q70Z35 1606 aa-1.26□□□□□ -2.61
CASC4-206ENST00000558847 KIF21BO75037 1637 aa-1.26□□□□□ -2.61
CASC4-206ENST00000558847 CROCC2H7BZ55 1655 aa-1.26□□□□□ -2.61
CASC4-206ENST00000558847 DMDP11532 3685 aa-1.27□□□□□ -2.61
CASC4-206ENST00000558847 ATXN8Q156A1 80 aa-1.27□□□□□ -2.61
CASC4-206ENST00000558847 NHSQ6T4R5 1651 aa-1.27□□□□□ -2.61
CASC4-206ENST00000558847 KAAG1Q9UBP8 84 aa-1.28□□□□□ -2.61
CASC4-206ENST00000558847 PCNTO95613 3336 aa-1.28□□□□□ -2.61
CASC4-206ENST00000558847 MYO5CQ9NQX4 1742 aa-1.29□□□□□ -2.62
CASC4-206ENST00000558847 CEP250Q9BV73 2442 aa-1.29□□□□□ -2.62
CASC4-206ENST00000558847 CLASP1Q7Z460 1538 aa-1.3□□□□□ -2.62
CASC4-206ENST00000558847 EEA1Q15075 1411 aa-1.3□□□□□ -2.62
CASC4-206ENST00000558847 SMIM27A0A1W2PRY6 76 aa-1.3□□□□□ -2.62
CASC4-206ENST00000558847 WDFY3Q8IZQ1 3526 aa-1.3□□□□□ -2.62
CASC4-206ENST00000558847 VPS13CQ709C8 3753 aa-1.3□□□□□ -2.62
CASC4-206ENST00000558847 FRYLO94915 3013 aa-1.31□□□□□ -2.62
CASC4-206ENST00000558847 FAM208AQ9UK61 1670 aaKnown RBP-1.32□□□□□ -2.62
CASC4-206ENST00000558847 POLR2KP53803 58 aaKnown RBP-1.32□□□□□ -2.62
CASC4-206ENST00000558847 TTTY10Q9BZA0 68 aa-1.32□□□□□ -2.62
CASC4-206ENST00000558847 ABCC6O95255 1503 aa-1.32□□□□□ -2.62
CASC4-206ENST00000558847 ASXL1Q8IXJ9 1541 aa-1.32□□□□□ -2.62
CASC4-206ENST00000558847 DIP2AQ14689 1571 aa-1.33□□□□□ -2.62
CASC4-206ENST00000558847 WFDC10BQ8IUB3 73 aa-1.34□□□□□ -2.62
CASC4-206ENST00000558847 MROH1Q8NDA8 1641 aa-1.34□□□□□ -2.62
CASC4-206ENST00000558847 GLI2P10070 1586 aa-1.34□□□□□ -2.62
CASC4-206ENST00000558847 DEFB131AP59861 70 aa-1.35□□□□□ -2.63
CASC4-206ENST00000558847 TMEM167BQ9NRX6 74 aa-1.35□□□□□ -2.63
CASC4-206ENST00000558847 EP400Q96L91 3159 aa-1.35□□□□□ -2.63
CASC4-206ENST00000558847 K7EMI3 77 aa-1.36□□□□□ -2.63
CASC4-206ENST00000558847 NMES1Q9C002 83 aa-1.36□□□□□ -2.63
CASC4-206ENST00000558847 TIAM1Q13009 1591 aa-1.37□□□□□ -2.63
CASC4-206ENST00000558847 WDFY4Q6ZS81 3184 aa-1.37□□□□□ -2.63
CASC4-206ENST00000558847 MUC3AQ02505 3323 aa-1.37□□□□□ -2.63
CASC4-206ENST00000558847 MADDQ8WXG6 1647 aa-1.37□□□□□ -2.63
CASC4-206ENST00000558847 C3P01024 1663 aa-1.38□□□□□ -2.63
CASC4-206ENST00000558847 DUOX2Q9NRD8 1548 aa-1.38□□□□□ -2.63
CASC4-206ENST00000558847 GNG13Q9P2W3 67 aa-1.38□□□□□ -2.63
CASC4-206ENST00000558847 LINC00308Q8TCZ7 52 aa-1.39□□□□□ -2.63
CASC4-206ENST00000558847 SZT2Q5T011 3432 aa-1.4□□□□□ -2.63
CASC4-206ENST00000558847 HILPDAQ9Y5L2 63 aa-1.4□□□□□ -2.63
CASC4-206ENST00000558847 DCHS1Q96JQ0 3298 aa-1.4□□□□□ -2.63
CASC4-206ENST00000558847 SERF2P84101 59 aa-1.41□□□□□ -2.64
CASC4-206ENST00000558847 SMCO4Q9NRQ5 59 aa-1.41□□□□□ -2.64
CASC4-206ENST00000558847 PDCD5O14737 125 aa-1.42□□□□□ -2.64
CASC4-206ENST00000558847 UGGT2Q9NYU1 1516 aa-1.42□□□□□ -2.64
CASC4-206ENST00000558847 S100ZQ8WXG8 99 aa-1.43□□□□□ -2.64
CASC4-206ENST00000558847 CFAP47Q6ZTR5 3102 aa-1.43□□□□□ -2.64
CASC4-206ENST00000558847 SCRIBQ14160 1630 aa-1.44□□□□□ -2.64
CASC4-206ENST00000558847 CD52P31358 61 aa-1.44□□□□□ -2.64
CASC4-206ENST00000558847 M0R1W7 72 aa-1.45□□□□□ -2.64
CASC4-206ENST00000558847 DEFB133Q30KQ1 61 aa-1.45□□□□□ -2.64
CASC4-206ENST00000558847 MROH2AA6NES4 1674 aa-1.45□□□□□ -2.64
CASC4-206ENST00000558847 ALS2Q96Q42 1657 aa-1.45□□□□□ -2.64
CASC4-206ENST00000558847 MKI67P46013 3256 aaKnown RBP-1.46□□□□□ -2.64
CASC4-206ENST00000558847 CCDC180Q9P1Z9 1646 aa-1.47□□□□□ -2.64
CASC4-206ENST00000558847 NRXN3Q9Y4C0 1643 aa-1.47□□□□□ -2.64
CASC4-206ENST00000558847 H0YGX0 51 aa-1.47□□□□□ -2.64
CASC4-206ENST00000558847 SMIM2Q9BVW6 85 aa-1.47□□□□□ -2.64
CASC4-206ENST00000558847 RHPN1-AS1Q9BWJ2 59 aa-1.47□□□□□ -2.64
CASC4-206ENST00000558847 EFCAB6Q5THR3 1501 aa-1.47□□□□□ -2.64
CASC4-206ENST00000558847 IQGAP3Q86VI3 1631 aa-1.48□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms